RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SPATA31E1Q6ZUB1 1445 aa16.07■□□□□ 0.16
PTCH1-207ENST00000429896 PIK3R4Q99570 1358 aa16.07■□□□□ 0.16
PTCH1-207ENST00000429896 INO80Q9ULG1 1556 aaPredicted RBP16.07■□□□□ 0.16
PTCH1-207ENST00000429896 ASXL1Q8IXJ9 1541 aa16.07■□□□□ 0.16
PTCH1-207ENST00000429896 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
PTCH1-207ENST00000429896 DDX19BQ9UMR2 479 aa16.07■□□□□ 0.16
PTCH1-207ENST00000429896 UNC13BO14795 1591 aa16.07■□□□□ 0.16
PTCH1-207ENST00000429896 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
PTCH1-207ENST00000429896 TMPOP42166 694 aaKnown RBP16.06■□□□□ 0.16
PTCH1-207ENST00000429896 AGLP35573 1532 aa16.06■□□□□ 0.16
PTCH1-207ENST00000429896 PLIN1O60240 522 aa16.06■□□□□ 0.16
PTCH1-207ENST00000429896 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
PTCH1-207ENST00000429896 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
PTCH1-207ENST00000429896 RRP1P56182 461 aaKnown RBP16.05■□□□□ 0.16
PTCH1-207ENST00000429896 STARD3NLO95772 234 aa16.05■□□□□ 0.16
PTCH1-207ENST00000429896 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
PTCH1-207ENST00000429896 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
PTCH1-207ENST00000429896 FBLN1P23142 703 aa16.05■□□□□ 0.16
PTCH1-207ENST00000429896 DCAF8L1A6NGE4 600 aa16.05■□□□□ 0.16
PTCH1-207ENST00000429896 MCM10Q7L590 875 aa16.05■□□□□ 0.16
PTCH1-207ENST00000429896 HSP90AB2PQ58FF8 381 aa16.04■□□□□ 0.16
PTCH1-207ENST00000429896 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
PTCH1-207ENST00000429896 COG6Q9Y2V7 657 aa16.04■□□□□ 0.16
PTCH1-207ENST00000429896 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
PTCH1-207ENST00000429896 MCCP23508 829 aa16.04■□□□□ 0.16
PTCH1-207ENST00000429896 KIF1BO60333 1816 aa16.04■□□□□ 0.16
PTCH1-207ENST00000429896 FLT4P35916 1363 aa16.03■□□□□ 0.16
PTCH1-207ENST00000429896 PIK3C2GO75747 1445 aa16.03■□□□□ 0.16
PTCH1-207ENST00000429896 CLTCQ00610 1675 aaKnown RBP16.03■□□□□ 0.16
PTCH1-207ENST00000429896 EDC4Q6P2E9 1401 aaKnown RBP16.03■□□□□ 0.16
PTCH1-207ENST00000429896 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
PTCH1-207ENST00000429896 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
PTCH1-207ENST00000429896 BTG4Q9NY30 223 aa16.03■□□□□ 0.16
PTCH1-207ENST00000429896 MYL6BP14649 208 aa16.02■□□□□ 0.16
PTCH1-207ENST00000429896 ANO8Q9HCE9 1232 aaPredicted RBP16.02■□□□□ 0.16
PTCH1-207ENST00000429896 TAF7Q15545 349 aaPredicted RBP16.02■□□□□ 0.15
PTCH1-207ENST00000429896 PLEKHG3A1L390 1219 aa16.02■□□□□ 0.15
PTCH1-207ENST00000429896 SLC4A2P04920 1241 aa16.02■□□□□ 0.15
PTCH1-207ENST00000429896 DDB1Q16531 1140 aa16.01■□□□□ 0.15
PTCH1-207ENST00000429896 MAP3K4Q9Y6R4 1608 aa16.01■□□□□ 0.15
PTCH1-207ENST00000429896 LMTK2Q8IWU2 1503 aa16.01■□□□□ 0.15
PTCH1-207ENST00000429896 PTCD1O75127 700 aaKnown RBP16.01■□□□□ 0.15
PTCH1-207ENST00000429896 IL2RBP14784 551 aa16.01■□□□□ 0.15
PTCH1-207ENST00000429896 TRIM6-TRIM34B2RNG4 842 aa16.01■□□□□ 0.15
PTCH1-207ENST00000429896 ADGRB3O60242 1522 aa16.01■□□□□ 0.15
PTCH1-207ENST00000429896 PTPRMP28827 1452 aa16■□□□□ 0.15
PTCH1-207ENST00000429896 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
PTCH1-207ENST00000429896 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
PTCH1-207ENST00000429896 ROBO2Q9HCK4 1378 aa16■□□□□ 0.15
PTCH1-207ENST00000429896 UBTFL1P0CB47 393 aaPredicted RBP16■□□□□ 0.15
PTCH1-207ENST00000429896 CAMSAP1Q5T5Y3 1602 aa16■□□□□ 0.15
PTCH1-207ENST00000429896 G3BP1Q13283 466 aaKnown RBP eCLIP16■□□□□ 0.15
PTCH1-207ENST00000429896 CDCA7LQ96GN5 454 aa16■□□□□ 0.15
PTCH1-207ENST00000429896 IP6K1Q92551 441 aa15.99■□□□□ 0.15
PTCH1-207ENST00000429896 ZFYVE9O95405 1425 aa15.99■□□□□ 0.15
PTCH1-207ENST00000429896 HOXC9P31274 260 aa15.99■□□□□ 0.15
PTCH1-207ENST00000429896 VPS37DQ86XT2 251 aa15.99■□□□□ 0.15
PTCH1-207ENST00000429896 DCTN1Q14203 1278 aa15.99■□□□□ 0.15
PTCH1-207ENST00000429896 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
PTCH1-207ENST00000429896 POLKQ9UBT6 870 aa15.99■□□□□ 0.15
PTCH1-207ENST00000429896 RNF17Q9BXT8 1623 aaKnown RBP15.98■□□□□ 0.15
PTCH1-207ENST00000429896 PLA2R1Q13018 1463 aa15.98■□□□□ 0.15
PTCH1-207ENST00000429896 CT47B1P0C2W7 299 aaPredicted RBP15.98■□□□□ 0.15
PTCH1-207ENST00000429896 PDE4CQ08493 712 aa15.98■□□□□ 0.15
PTCH1-207ENST00000429896 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
PTCH1-207ENST00000429896 ARID3AQ99856 593 aa15.98■□□□□ 0.15
PTCH1-207ENST00000429896 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
PTCH1-207ENST00000429896 CRBNQ96SW2 442 aa15.98■□□□□ 0.15
PTCH1-207ENST00000429896 CCDC184Q52MB2 194 aa15.98■□□□□ 0.15
PTCH1-207ENST00000429896 ZMYM4Q5VZL5 1548 aa15.98■□□□□ 0.15
PTCH1-207ENST00000429896 CARD14Q9BXL6 1004 aa15.98■□□□□ 0.15
PTCH1-207ENST00000429896 WWC1Q8IX03 1113 aa15.97■□□□□ 0.15
PTCH1-207ENST00000429896 THUMPD2Q9BTF0 503 aaKnown RBP15.97■□□□□ 0.15
PTCH1-207ENST00000429896 TSHZ2Q9NRE2 1034 aa15.97■□□□□ 0.15
PTCH1-207ENST00000429896 CEP152O94986 1710 aa15.97■□□□□ 0.15
PTCH1-207ENST00000429896 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
PTCH1-207ENST00000429896 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
PTCH1-207ENST00000429896 FAM135BQ49AJ0 1406 aa15.96■□□□□ 0.15
PTCH1-207ENST00000429896 FBXW7Q969H0 707 aa15.96■□□□□ 0.15
PTCH1-207ENST00000429896 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
PTCH1-207ENST00000429896 CDCA7Q9BWT1 371 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-207ENST00000429896 HSP90AB4PQ58FF6 505 aa15.96■□□□□ 0.15
PTCH1-207ENST00000429896 GNAI3P08754 354 aa15.95■□□□□ 0.14
PTCH1-207ENST00000429896 ZPR1O75312 459 aa15.95■□□□□ 0.14
PTCH1-207ENST00000429896 ANKRD45Q5TZF3 282 aa15.95■□□□□ 0.14
PTCH1-207ENST00000429896 MAP3K19Q56UN5 1328 aa15.95■□□□□ 0.14
PTCH1-207ENST00000429896 KIDINS220Q9ULH0 1771 aa15.95■□□□□ 0.14
PTCH1-207ENST00000429896 USP21Q9UK80 565 aa15.94■□□□□ 0.14
PTCH1-207ENST00000429896 IFIT2P09913 472 aaKnown RBP15.94■□□□□ 0.14
PTCH1-207ENST00000429896 SYNMO15061 1565 aa15.94■□□□□ 0.14
PTCH1-207ENST00000429896 TEX13AQ9BXU3 409 aaPredicted RBP15.94■□□□□ 0.14
PTCH1-207ENST00000429896 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
PTCH1-207ENST00000429896 DUSP27Q5VZP5 1158 aa15.94■□□□□ 0.14
PTCH1-207ENST00000429896 ACSBG1Q96GR2 724 aa15.94■□□□□ 0.14
PTCH1-207ENST00000429896 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
PTCH1-207ENST00000429896 NOB1Q9ULX3 412 aaKnown RBP15.93■□□□□ 0.14
PTCH1-207ENST00000429896 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
PTCH1-207ENST00000429896 RIMS1Q86UR5 1692 aaKnown RBP15.93■□□□□ 0.14
PTCH1-207ENST00000429896 SPHKAPQ2M3C7 1700 aa15.93■□□□□ 0.14
PTCH1-207ENST00000429896 EXOC6Q8TAG9 804 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms