RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 E9PSI1 815 aa22.75■■□□□ 1.23
FN1-208ENST00000426059 RIPK4P57078 832 aa22.75■■□□□ 1.23
FN1-208ENST00000426059 SBNO1A3KN83 1393 aa22.74■■□□□ 1.23
FN1-208ENST00000426059 ZBTB7CA1YPR0 619 aa22.74■■□□□ 1.23
FN1-208ENST00000426059 PNNQ9H307 717 aaKnown RBP22.74■■□□□ 1.23
FN1-208ENST00000426059 TRIM35Q9UPQ4 493 aa22.74■■□□□ 1.23
FN1-208ENST00000426059 FLT4P35916 1363 aa22.74■■□□□ 1.23
FN1-208ENST00000426059 USP54Q70EL1 1684 aa22.74■■□□□ 1.23
FN1-208ENST00000426059 SULT6B1Q6IMI4 303 aa22.74■■□□□ 1.23
FN1-208ENST00000426059 KIF1AQ12756 1690 aa22.73■■□□□ 1.23
FN1-208ENST00000426059 CCDC27Q2M243 656 aa22.73■■□□□ 1.23
FN1-208ENST00000426059 TRPM3Q9HCF6 1732 aaPredicted RBP22.72■■□□□ 1.23
FN1-208ENST00000426059 NEFMP07197 916 aa22.71■■□□□ 1.23
FN1-208ENST00000426059 HOXC9P31274 260 aa22.71■■□□□ 1.23
FN1-208ENST00000426059 LTV1Q96GA3 475 aaPredicted RBP22.71■■□□□ 1.23
FN1-208ENST00000426059 PLIN1O60240 522 aa22.7■■□□□ 1.22
FN1-208ENST00000426059 RRP1P56182 461 aaKnown RBP22.7■■□□□ 1.22
FN1-208ENST00000426059 WDR63Q8IWG1 891 aa22.7■■□□□ 1.22
FN1-208ENST00000426059 LTN1O94822 1766 aa22.7■■□□□ 1.22
FN1-208ENST00000426059 NFAT5O94916 1531 aa22.68■■□□□ 1.22
FN1-208ENST00000426059 GCP02774 474 aa22.67■■□□□ 1.22
FN1-208ENST00000426059 EYA1Q99502 592 aa22.67■■□□□ 1.22
FN1-208ENST00000426059 RGPD1P0DJD0 1748 aa22.66■■□□□ 1.22
FN1-208ENST00000426059 NFE2L2Q16236 605 aa22.66■■□□□ 1.22
FN1-208ENST00000426059 BRINP3Q76B58 766 aa22.66■■□□□ 1.22
FN1-208ENST00000426059 THUMPD2Q9BTF0 503 aaKnown RBP22.65■■□□□ 1.22
FN1-208ENST00000426059 KCNH5Q8NCM2 988 aa22.65■■□□□ 1.22
FN1-208ENST00000426059 TSR2Q969E8 191 aaKnown RBP22.65■■□□□ 1.22
FN1-208ENST00000426059 SLAIN2Q9P270 581 aa22.65■■□□□ 1.22
FN1-208ENST00000426059 NCBP3Q53F19 620 aaKnown RBP22.64■■□□□ 1.22
FN1-208ENST00000426059 NPHP3Q7Z494 1330 aa22.64■■□□□ 1.21
FN1-208ENST00000426059 DLG5Q8TDM6 1919 aa22.63■■□□□ 1.21
FN1-208ENST00000426059 ALS2Q96Q42 1657 aa22.63■■□□□ 1.21
FN1-208ENST00000426059 FAM83GA6ND36 823 aa22.62■■□□□ 1.21
FN1-208ENST00000426059 CABLES1Q8TDN4 633 aa22.62■■□□□ 1.21
FN1-208ENST00000426059 IP6K1Q92551 441 aa22.61■■□□□ 1.21
FN1-208ENST00000426059 BCAR3O75815 825 aa22.61■■□□□ 1.21
FN1-208ENST00000426059 USHBP1Q8N6Y0 703 aa22.61■■□□□ 1.21
FN1-208ENST00000426059 ZC3H6P61129 1189 aaKnown RBP22.6■■□□□ 1.21
FN1-208ENST00000426059 DCTN1Q14203 1278 aa22.6■■□□□ 1.21
FN1-208ENST00000426059 USP19O94966 1318 aa22.6■■□□□ 1.21
FN1-208ENST00000426059 IGSF1Q8N6C5 1336 aa22.6■■□□□ 1.21
FN1-208ENST00000426059 ARHGEF10O15013 1369 aa22.6■■□□□ 1.21
FN1-208ENST00000426059 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
FN1-208ENST00000426059 SLIT3O75094 1523 aa22.6■■□□□ 1.21
FN1-208ENST00000426059 MYH16Q9H6N6 1097 aa22.6■■□□□ 1.21
FN1-208ENST00000426059 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
FN1-208ENST00000426059 ARHGEF25Q86VW2 580 aa22.59■■□□□ 1.21
FN1-208ENST00000426059 FANCIQ9NVI1 1328 aa22.59■■□□□ 1.21
FN1-208ENST00000426059 MED1Q15648 1581 aaPredicted RBP22.59■■□□□ 1.21
FN1-208ENST00000426059 PXDNQ92626 1479 aa22.59■■□□□ 1.21
FN1-208ENST00000426059 RTL1A6NKG5 1358 aa22.58■■□□□ 1.2
FN1-208ENST00000426059 C20orf194Q5TEA3 1177 aa22.57■■□□□ 1.2
FN1-208ENST00000426059 ERICH6BQ5W0A0 696 aa22.57■■□□□ 1.2
FN1-208ENST00000426059 B4GALNT3Q6L9W6 998 aa22.57■■□□□ 1.2
FN1-208ENST00000426059 PPP4R2Q9NY27 417 aa22.57■■□□□ 1.2
FN1-208ENST00000426059 EXOC6Q8TAG9 804 aa22.56■■□□□ 1.2
FN1-208ENST00000426059 AXIN2Q9Y2T1 843 aa22.56■■□□□ 1.2
FN1-208ENST00000426059 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
FN1-208ENST00000426059 TNS3Q68CZ2 1445 aa22.55■■□□□ 1.2
FN1-208ENST00000426059 KDRP35968 1356 aa22.55■■□□□ 1.2
FN1-208ENST00000426059 SPATA31A3Q5VYP0 1347 aa22.55■■□□□ 1.2
FN1-208ENST00000426059 EXOSC9Q06265 439 aaKnown RBP22.55■■□□□ 1.2
FN1-208ENST00000426059 NBPF6Q5VWK0 638 aa22.55■■□□□ 1.2
FN1-208ENST00000426059 NBPF4Q96M43 638 aa22.55■■□□□ 1.2
FN1-208ENST00000426059 RGPD2P0DJD1 1756 aa22.55■■□□□ 1.2
FN1-208ENST00000426059 MTHFSDQ2M296 383 aaKnown RBP22.54■■□□□ 1.2
FN1-208ENST00000426059 BCL2L13Q9BXK5 485 aa22.54■■□□□ 1.2
FN1-208ENST00000426059 IL16Q14005 1332 aa22.53■■□□□ 1.2
FN1-208ENST00000426059 MCM10Q7L590 875 aa22.53■■□□□ 1.2
FN1-208ENST00000426059 RGPD5Q99666 1765 aa22.52■■□□□ 1.2
FN1-208ENST00000426059 PHRF1Q9P1Y6 1649 aaKnown RBP22.51■■□□□ 1.19
FN1-208ENST00000426059 RARSP54136 660 aaKnown RBP22.5■■□□□ 1.19
FN1-208ENST00000426059 CRBNQ96SW2 442 aa22.5■■□□□ 1.19
FN1-208ENST00000426059 LMOD3Q0VAK6 560 aa22.49■■□□□ 1.19
FN1-208ENST00000426059 ANKRD24Q8TF21 1146 aa22.49■■□□□ 1.19
FN1-208ENST00000426059 CHRNA2Q15822 529 aa22.49■■□□□ 1.19
FN1-208ENST00000426059 SOS2Q07890 1332 aaPredicted RBP22.48■■□□□ 1.19
FN1-208ENST00000426059 FRAT1Q92837 279 aaPredicted RBP22.47■■□□□ 1.19
FN1-208ENST00000426059 MBIPQ9NS73 344 aa22.47■■□□□ 1.19
FN1-208ENST00000426059 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.46■■□□□ 1.19
FN1-208ENST00000426059 CALD1Q05682 793 aaKnown RBP22.45■■□□□ 1.18
FN1-208ENST00000426059 IFT57Q9NWB7 429 aa22.45■■□□□ 1.18
FN1-208ENST00000426059 ZNF853P0CG23 659 aa22.45■■□□□ 1.18
FN1-208ENST00000426059 GNAI1P63096 354 aa22.45■■□□□ 1.18
FN1-208ENST00000426059 CRYBG1Q9Y4K1 1723 aa22.44■■□□□ 1.18
FN1-208ENST00000426059 ELL2O00472 640 aaPredicted RBP22.44■■□□□ 1.18
FN1-208ENST00000426059 CCDC136Q96JN2 1154 aa22.43■■□□□ 1.18
FN1-208ENST00000426059 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
FN1-208ENST00000426059 LTBP4Q8N2S1 1624 aa22.43■■□□□ 1.18
FN1-208ENST00000426059 KIAA0232Q92628 1395 aa22.43■■□□□ 1.18
FN1-208ENST00000426059 CANXP27824 592 aaKnown RBP22.43■■□□□ 1.18
FN1-208ENST00000426059 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
FN1-208ENST00000426059 TSPYL6Q8N831 410 aa22.42■■□□□ 1.18
FN1-208ENST00000426059 TNNQ9UQP3 1299 aa22.42■■□□□ 1.18
FN1-208ENST00000426059 ERBB3P21860 1342 aa22.42■■□□□ 1.18
FN1-208ENST00000426059 RTF1Q92541 710 aaKnown RBP22.42■■□□□ 1.18
FN1-208ENST00000426059 MIS18AQ9NYP9 233 aa22.42■■□□□ 1.18
FN1-208ENST00000426059 SSH1Q8WYL5 1049 aa22.4■■□□□ 1.18
FN1-208ENST00000426059 NHSL1Q5SYE7 1610 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms