RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 USP17L22D6RA61 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L17D6RBQ6 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L19D6RCP7 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L20D6RJB6 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L24Q0WX57 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 ZBTB33Q86T24 672 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 NKX2-3Q8TAU0 364 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
LINC00400-201ENST00000425609 LZTS3O60299 673 aaPredicted RBP8.42□□□□□ -1.06
LINC00400-201ENST00000425609 S1PR4O95977 384 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 PTK7Q13308 1070 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 MAP7D1Q3KQU3 841 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 TMCO4Q5TGY1 634 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 BAP1Q92560 729 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 FCF1Q9Y324 198 aaKnown RBP8.42□□□□□ -1.06
LINC00400-201ENST00000425609 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 TSGA10IPQ3SY00 556 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 ERFEQ4G0M1 354 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 ZNF511Q8NB15 262 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 FOXJ1Q92949 421 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
LINC00400-201ENST00000425609 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
LINC00400-201ENST00000425609 BPHLQ86WA6 291 aaPredicted RBP8.4□□□□□ -1.06
LINC00400-201ENST00000425609 DZIP3Q86Y13 1208 aaKnown RBP8.4□□□□□ -1.06
LINC00400-201ENST00000425609 CCDC85AQ96PX6 553 aaPredicted RBP8.4□□□□□ -1.06
LINC00400-201ENST00000425609 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
LINC00400-201ENST00000425609 IVNS1ABPQ9Y6Y0 642 aa8.4□□□□□ -1.06
LINC00400-201ENST00000425609 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
LINC00400-201ENST00000425609 EML3Q32P44 896 aa8.39□□□□□ -1.07
LINC00400-201ENST00000425609 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
LINC00400-201ENST00000425609 SLAIN2Q9P270 581 aa8.39□□□□□ -1.07
LINC00400-201ENST00000425609 GIGYF1O75420 1035 aaPredicted RBP8.38□□□□□ -1.07
LINC00400-201ENST00000425609 RASA1P20936 1047 aa8.38□□□□□ -1.07
LINC00400-201ENST00000425609 MFAP1P55081 439 aaKnown RBP8.38□□□□□ -1.07
LINC00400-201ENST00000425609 CLDN10P78369 228 aa8.38□□□□□ -1.07
LINC00400-201ENST00000425609 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
LINC00400-201ENST00000425609 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
LINC00400-201ENST00000425609 RGS22Q8NE09 1264 aa8.38□□□□□ -1.07
LINC00400-201ENST00000425609 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
LINC00400-201ENST00000425609 DKK1O94907 266 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 PHLDB3Q6NSJ2 640 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 OGFOD1Q8N543 542 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 DOLKQ9UPQ8 538 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 ESPNB1AK53 854 aa8.36□□□□□ -1.07
LINC00400-201ENST00000425609 SH3BP2P78314 561 aa8.36□□□□□ -1.07
LINC00400-201ENST00000425609 TRMT44Q8IYL2 757 aaKnown RBP8.36□□□□□ -1.07
LINC00400-201ENST00000425609 SLC10A4Q96EP9 437 aa8.36□□□□□ -1.07
LINC00400-201ENST00000425609 AGERQ15109 404 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 CLP1Q92989 425 aaKnown RBP8.35□□□□□ -1.07
LINC00400-201ENST00000425609 CDCA7Q9BWT1 371 aaPredicted RBP8.35□□□□□ -1.07
LINC00400-201ENST00000425609 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 NOD1Q9Y239 953 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
LINC00400-201ENST00000425609 SSFA2P28290 1259 aa8.34□□□□□ -1.07
LINC00400-201ENST00000425609 DPYDQ12882 1025 aa8.34□□□□□ -1.07
LINC00400-201ENST00000425609 TXNDC2Q86VQ3 553 aa8.34□□□□□ -1.07
LINC00400-201ENST00000425609 SIX5Q8N196 739 aa8.34□□□□□ -1.07
LINC00400-201ENST00000425609 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
LINC00400-201ENST00000425609 ZBTB7BO15156 539 aaPredicted RBP8.33□□□□□ -1.08
LINC00400-201ENST00000425609 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
LINC00400-201ENST00000425609 ATP1A2P50993 1020 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 RNF20Q5VTR2 975 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 SND1Q7KZF4 910 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00400-201ENST00000425609 LARGE2Q8N3Y3 721 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 ZNF594Q96JF6 807 aaPredicted RBP8.33□□□□□ -1.08
LINC00400-201ENST00000425609 MTMR7Q9Y216 660 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 GTF2IP78347 998 aa8.32□□□□□ -1.08
LINC00400-201ENST00000425609 SWI5Q1ZZU3 235 aa8.32□□□□□ -1.08
LINC00400-201ENST00000425609 PLA2G2CQ5R387 149 aa8.32□□□□□ -1.08
LINC00400-201ENST00000425609 SEPT12Q8IYM1 358 aa8.32□□□□□ -1.08
LINC00400-201ENST00000425609 CDV3Q9UKY7 258 aaKnown RBP8.32□□□□□ -1.08
LINC00400-201ENST00000425609 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
LINC00400-201ENST00000425609 TRIM32Q13049 653 aa8.31□□□□□ -1.08
LINC00400-201ENST00000425609 PCDHGA11Q9Y5H2 935 aa8.31□□□□□ -1.08
LINC00400-201ENST00000425609 RANGAP1P46060 587 aaPredicted RBP8.3□□□□□ -1.08
LINC00400-201ENST00000425609 SKOR1P84550 965 aa8.3□□□□□ -1.08
LINC00400-201ENST00000425609 KCNC4Q03721 635 aa8.3□□□□□ -1.08
LINC00400-201ENST00000425609 ANKLE1Q8NAG6 615 aa8.3□□□□□ -1.08
LINC00400-201ENST00000425609 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
LINC00400-201ENST00000425609 MAP4K5Q9Y4K4 846 aa8.29□□□□□ -1.08
LINC00400-201ENST00000425609 PCDHB11Q9Y5F2 797 aa8.29□□□□□ -1.08
LINC00400-201ENST00000425609 ATP2B4P23634 1241 aa8.28□□□□□ -1.08
LINC00400-201ENST00000425609 WNT7BP56706 349 aa8.28□□□□□ -1.08
LINC00400-201ENST00000425609 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
LINC00400-201ENST00000425609 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
LINC00400-201ENST00000425609 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
LINC00400-201ENST00000425609 ZBTB24O43167 697 aaPredicted RBP8.27□□□□□ -1.09
LINC00400-201ENST00000425609 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
LINC00400-201ENST00000425609 SEC13P55735 322 aa8.27□□□□□ -1.09
LINC00400-201ENST00000425609 USP4Q13107 963 aa8.27□□□□□ -1.09
LINC00400-201ENST00000425609 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
LINC00400-201ENST00000425609 INTS6LQ5JSJ4 861 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms