RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 ELL2O00472 640 aaPredicted RBP12.4□□□□□ -0.42
SRPK1-205ENST00000423325 NFE2L2Q16236 605 aa12.4□□□□□ -0.42
SRPK1-205ENST00000423325 CENPQQ7L2Z9 268 aaPredicted RBP12.4□□□□□ -0.42
SRPK1-205ENST00000423325 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
SRPK1-205ENST00000423325 MARF1Q9Y4F3 1742 aaKnown RBP12.4□□□□□ -0.42
SRPK1-205ENST00000423325 TRIM27P14373 513 aa12.4□□□□□ -0.42
SRPK1-205ENST00000423325 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
SRPK1-205ENST00000423325 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
SRPK1-205ENST00000423325 ADAMTSL3P82987 1691 aa12.39□□□□□ -0.43
SRPK1-205ENST00000423325 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
SRPK1-205ENST00000423325 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
SRPK1-205ENST00000423325 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
SRPK1-205ENST00000423325 NCBP3Q53F19 620 aaKnown RBP12.38□□□□□ -0.43
SRPK1-205ENST00000423325 FOXO3O43524 673 aa12.38□□□□□ -0.43
SRPK1-205ENST00000423325 NGDNQ8NEJ9 315 aaKnown RBP12.38□□□□□ -0.43
SRPK1-205ENST00000423325 ANP32EQ9BTT0 268 aa12.38□□□□□ -0.43
SRPK1-205ENST00000423325 USP31Q70CQ4 1352 aa12.37□□□□□ -0.43
SRPK1-205ENST00000423325 MBIPQ9NS73 344 aa12.37□□□□□ -0.43
SRPK1-205ENST00000423325 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
SRPK1-205ENST00000423325 CHD2O14647 1828 aaKnown RBP12.36□□□□□ -0.43
SRPK1-205ENST00000423325 FMN2Q9NZ56 1722 aa12.36□□□□□ -0.43
SRPK1-205ENST00000423325 C8orf58Q8NAV2 365 aa12.36□□□□□ -0.43
SRPK1-205ENST00000423325 IL16Q14005 1332 aa12.36□□□□□ -0.43
SRPK1-205ENST00000423325 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
SRPK1-205ENST00000423325 MCM10Q7L590 875 aa12.36□□□□□ -0.43
SRPK1-205ENST00000423325 ZNF853P0CG23 659 aa12.35□□□□□ -0.43
SRPK1-205ENST00000423325 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
SRPK1-205ENST00000423325 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
SRPK1-205ENST00000423325 TMEM57Q8N5G2 664 aa12.34□□□□□ -0.43
SRPK1-205ENST00000423325 ZNF142P52746 1687 aaPredicted RBP12.34□□□□□ -0.43
SRPK1-205ENST00000423325 VAMP4O75379 141 aa12.34□□□□□ -0.43
SRPK1-205ENST00000423325 ZKSCAN2Q63HK3 967 aa12.34□□□□□ -0.43
SRPK1-205ENST00000423325 MS4A1P11836 297 aa12.34□□□□□ -0.43
SRPK1-205ENST00000423325 DZIP1LQ8IYY4 767 aaKnown RBP12.34□□□□□ -0.43
SRPK1-205ENST00000423325 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
SRPK1-205ENST00000423325 MIS18AQ9NYP9 233 aa12.33□□□□□ -0.44
SRPK1-205ENST00000423325 ANKLE2Q86XL3 938 aa12.33□□□□□ -0.44
SRPK1-205ENST00000423325 NLRP6P59044 892 aa12.33□□□□□ -0.44
SRPK1-205ENST00000423325 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
SRPK1-205ENST00000423325 EYA1Q99502 592 aa12.32□□□□□ -0.44
SRPK1-205ENST00000423325 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
SRPK1-205ENST00000423325 SEC24BO95487 1268 aa12.31□□□□□ -0.44
SRPK1-205ENST00000423325 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
SRPK1-205ENST00000423325 FTSJ3Q8IY81 847 aaKnown RBP12.31□□□□□ -0.44
SRPK1-205ENST00000423325 ORAI2Q96SN7 254 aa12.31□□□□□ -0.44
SRPK1-205ENST00000423325 USHBP1Q8N6Y0 703 aa12.3□□□□□ -0.44
SRPK1-205ENST00000423325 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
SRPK1-205ENST00000423325 MTHFSDQ2M296 383 aaKnown RBP12.3□□□□□ -0.44
SRPK1-205ENST00000423325 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
SRPK1-205ENST00000423325 NWD1Q149M9 1564 aa12.3□□□□□ -0.44
SRPK1-205ENST00000423325 MRPL50Q8N5N7 158 aaKnown RBP12.3□□□□□ -0.44
SRPK1-205ENST00000423325 LTV1Q96GA3 475 aaPredicted RBP12.3□□□□□ -0.44
SRPK1-205ENST00000423325 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
SRPK1-205ENST00000423325 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
SRPK1-205ENST00000423325 IPO9Q96P70 1041 aaKnown RBP12.3□□□□□ -0.44
SRPK1-205ENST00000423325 IFT57Q9NWB7 429 aa12.3□□□□□ -0.44
SRPK1-205ENST00000423325 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
SRPK1-205ENST00000423325 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
SRPK1-205ENST00000423325 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
SRPK1-205ENST00000423325 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
SRPK1-205ENST00000423325 ANKARQ7Z5J8 1434 aa12.29□□□□□ -0.44
SRPK1-205ENST00000423325 CT47B1P0C2W7 299 aaPredicted RBP12.28□□□□□ -0.44
SRPK1-205ENST00000423325 SBNO1A3KN83 1393 aa12.28□□□□□ -0.44
SRPK1-205ENST00000423325 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
SRPK1-205ENST00000423325 NOP58Q9Y2X3 529 aaKnown RBP12.28□□□□□ -0.44
SRPK1-205ENST00000423325 HOXC9P31274 260 aa12.28□□□□□ -0.44
SRPK1-205ENST00000423325 TWISTNBQ3B726 338 aaPredicted RBP12.28□□□□□ -0.44
SRPK1-205ENST00000423325 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
SRPK1-205ENST00000423325 FLT4P35916 1363 aa12.28□□□□□ -0.44
SRPK1-205ENST00000423325 NEFMP07197 916 aa12.28□□□□□ -0.44
SRPK1-205ENST00000423325 AMPHP49418 695 aa12.28□□□□□ -0.44
SRPK1-205ENST00000423325 NPHP4O75161 1426 aaPredicted RBP12.27□□□□□ -0.44
SRPK1-205ENST00000423325 SLC4A3P48751 1232 aa12.27□□□□□ -0.44
SRPK1-205ENST00000423325 ZBTB40Q9NUA8 1239 aa12.27□□□□□ -0.44
SRPK1-205ENST00000423325 CRB1P82279 1406 aa12.27□□□□□ -0.45
SRPK1-205ENST00000423325 ANP32AP39687 249 aaKnown RBP12.27□□□□□ -0.45
SRPK1-205ENST00000423325 GNAI1P63096 354 aa12.27□□□□□ -0.45
SRPK1-205ENST00000423325 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
SRPK1-205ENST00000423325 IGSF1Q8N6C5 1336 aa12.26□□□□□ -0.45
SRPK1-205ENST00000423325 DDX17Q92841 729 aaKnown RBP12.26□□□□□ -0.45
SRPK1-205ENST00000423325 USP19O94966 1318 aa12.26□□□□□ -0.45
SRPK1-205ENST00000423325 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
SRPK1-205ENST00000423325 RGPD2P0DJD1 1756 aa12.26□□□□□ -0.45
SRPK1-205ENST00000423325 ADGRL3Q9HAR2 1447 aa12.26□□□□□ -0.45
SRPK1-205ENST00000423325 KDRP35968 1356 aa12.26□□□□□ -0.45
SRPK1-205ENST00000423325 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
SRPK1-205ENST00000423325 LTN1O94822 1766 aa12.25□□□□□ -0.45
SRPK1-205ENST00000423325 ARHGEF10O15013 1369 aa12.25□□□□□ -0.45
SRPK1-205ENST00000423325 CHL1O00533 1208 aa12.25□□□□□ -0.45
SRPK1-205ENST00000423325 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
SRPK1-205ENST00000423325 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
SRPK1-205ENST00000423325 RGS12O14924 1447 aa12.24□□□□□ -0.45
SRPK1-205ENST00000423325 SIRT2Q8IXJ6 389 aa12.24□□□□□ -0.45
SRPK1-205ENST00000423325 NFAT5O94916 1531 aa12.24□□□□□ -0.45
SRPK1-205ENST00000423325 STRCP1A6NGW2 1772 aa12.23□□□□□ -0.45
SRPK1-205ENST00000423325 ZBTB7BO15156 539 aaPredicted RBP12.23□□□□□ -0.45
SRPK1-205ENST00000423325 LRRC59Q96AG4 307 aaKnown RBP12.23□□□□□ -0.45
SRPK1-205ENST00000423325 USP54Q70EL1 1684 aa12.23□□□□□ -0.45
SRPK1-205ENST00000423325 HSPA2P54652 639 aa12.22□□□□□ -0.45
SRPK1-205ENST00000423325 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms