RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 SBF2Q86WG5 1849 aa26.24■■□□□ 1.79
SREBF1-206ENST00000423161 TOM1L2Q6ZVM7 507 aa26.24■■□□□ 1.79
SREBF1-206ENST00000423161 ARHGEF25Q86VW2 580 aa26.24■■□□□ 1.79
SREBF1-206ENST00000423161 CAMKK2Q96RR4 588 aa26.24■■□□□ 1.79
SREBF1-206ENST00000423161 AXIN2Q9Y2T1 843 aa26.24■■□□□ 1.79
SREBF1-206ENST00000423161 PEAK1Q9H792 1746 aa26.24■■□□□ 1.79
SREBF1-206ENST00000423161 WDR17Q8IZU2 1322 aa26.23■■□□□ 1.79
SREBF1-206ENST00000423161 CD163L1Q9NR16 1453 aa26.23■■□□□ 1.79
SREBF1-206ENST00000423161 NUP188Q5SRE5 1749 aa26.22■■□□□ 1.79
SREBF1-206ENST00000423161 PARD3Q8TEW0 1356 aa26.22■■□□□ 1.79
SREBF1-206ENST00000423161 LTN1O94822 1766 aa26.2■■□□□ 1.79
SREBF1-206ENST00000423161 ABCC6O95255 1503 aa26.2■■□□□ 1.79
SREBF1-206ENST00000423161 R3HDM1Q15032 1099 aaKnown RBP26.2■■□□□ 1.78
SREBF1-206ENST00000423161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.2■■□□□ 1.78
SREBF1-206ENST00000423161 OVOS2A0A0G2JMS6 1433 aa26.2■■□□□ 1.78
SREBF1-206ENST00000423161 OVOS2A0A0J9YW53 1432 aa26.2■■□□□ 1.78
SREBF1-206ENST00000423161 OVOS2Q6IE36 1432 aa26.2■■□□□ 1.78
SREBF1-206ENST00000423161 TMC1Q8TDI8 760 aa26.19■■□□□ 1.78
SREBF1-206ENST00000423161 C11orf95C9JLR9 678 aaPredicted RBP26.17■■□□□ 1.78
SREBF1-206ENST00000423161 DDB1Q16531 1140 aa26.17■■□□□ 1.78
SREBF1-206ENST00000423161 USP31Q70CQ4 1352 aa26.17■■□□□ 1.78
SREBF1-206ENST00000423161 CSB-PGBD3P0DP91 1061 aa26.16■■□□□ 1.78
SREBF1-206ENST00000423161 HDGFL2Q7Z4V5 671 aaPredicted RBP26.16■■□□□ 1.78
SREBF1-206ENST00000423161 TRIM26Q12899 539 aaPredicted RBP26.15■■□□□ 1.78
SREBF1-206ENST00000423161 NME9Q86XW9 330 aa26.15■■□□□ 1.78
SREBF1-206ENST00000423161 SLC12A5Q9H2X9 1139 aa26.15■■□□□ 1.78
SREBF1-206ENST00000423161 RGPD3A6NKT7 1758 aaPredicted RBP26.15■■□□□ 1.78
SREBF1-206ENST00000423161 RGPD4Q7Z3J3 1758 aa26.15■■□□□ 1.78
SREBF1-206ENST00000423161 EDC4Q6P2E9 1401 aaKnown RBP26.14■■□□□ 1.78
SREBF1-206ENST00000423161 CDCA7Q9BWT1 371 aaPredicted RBP26.13■■□□□ 1.77
SREBF1-206ENST00000423161 CARD10Q9BWT7 1032 aa26.13■■□□□ 1.77
SREBF1-206ENST00000423161 A0A1W2PP64 1363 aa26.12■■□□□ 1.77
SREBF1-206ENST00000423161 PUS7Q96PZ0 661 aaKnown RBP26.11■■□□□ 1.77
SREBF1-206ENST00000423161 TERF2IPQ9NYB0 399 aa26.11■■□□□ 1.77
SREBF1-206ENST00000423161 CCDC7Q96M83 1385 aa26.09■■□□□ 1.77
SREBF1-206ENST00000423161 ST20-MTHFSA0A0A6YYL1 179 aa26.08■■□□□ 1.77
SREBF1-206ENST00000423161 TESK2Q96S53 571 aa26.08■■□□□ 1.77
SREBF1-206ENST00000423161 MARCH10Q8NA82 808 aaPredicted RBP26.07■■□□□ 1.76
SREBF1-206ENST00000423161 NBPF14Q5TI25 921 aa26.06■■□□□ 1.76
SREBF1-206ENST00000423161 NINLQ9Y2I6 1382 aa26.06■■□□□ 1.76
SREBF1-206ENST00000423161 ERBB3P21860 1342 aa26.05■■□□□ 1.76
SREBF1-206ENST00000423161 BCL9O00512 1426 aa26.05■■□□□ 1.76
SREBF1-206ENST00000423161 TNS2Q63HR2 1409 aa26.05■■□□□ 1.76
SREBF1-206ENST00000423161 EXOC5O00471 708 aa26.03■■□□□ 1.76
SREBF1-206ENST00000423161 BCL11BQ9C0K0 894 aaPredicted RBP26.03■■□□□ 1.76
SREBF1-206ENST00000423161 PTF1AQ7RTS3 328 aa26.02■■□□□ 1.76
SREBF1-206ENST00000423161 NLRP2Q9NX02 1062 aa26.02■■□□□ 1.76
SREBF1-206ENST00000423161 PLSCR1O15162 318 aa26.01■■□□□ 1.75
SREBF1-206ENST00000423161 SLC24A1O60721 1099 aa26.01■■□□□ 1.75
SREBF1-206ENST00000423161 FAM208AQ9UK61 1670 aaKnown RBP26■■□□□ 1.75
SREBF1-206ENST00000423161 ANKRD24Q8TF21 1146 aa25.99■■□□□ 1.75
SREBF1-206ENST00000423161 KAT6BQ8WYB5 2073 aa25.99■■□□□ 1.75
SREBF1-206ENST00000423161 NHSQ6T4R5 1651 aa25.98■■□□□ 1.75
SREBF1-206ENST00000423161 USP47Q96K76 1375 aa25.97■■□□□ 1.75
SREBF1-206ENST00000423161 IL2RBP14784 551 aa25.95■■□□□ 1.74
SREBF1-206ENST00000423161 ANKRD36BQ8N2N9 1353 aa25.95■■□□□ 1.74
SREBF1-206ENST00000423161 COG3Q96JB2 828 aa25.94■■□□□ 1.74
SREBF1-206ENST00000423161 TMF1P82094 1093 aa25.93■■□□□ 1.74
SREBF1-206ENST00000423161 IP6K1Q92551 441 aa25.93■■□□□ 1.74
SREBF1-206ENST00000423161 RGPD2P0DJD1 1756 aa25.92■■□□□ 1.74
SREBF1-206ENST00000423161 ANO8Q9HCE9 1232 aaPredicted RBP25.92■■□□□ 1.74
SREBF1-206ENST00000423161 CASZ1Q86V15 1759 aa25.92■■□□□ 1.74
SREBF1-206ENST00000423161 KIF20BQ96Q89 1820 aa25.91■■□□□ 1.74
SREBF1-206ENST00000423161 BTAF1O14981 1849 aa25.91■■□□□ 1.74
SREBF1-206ENST00000423161 PROM2Q8N271 834 aa25.9■■□□□ 1.74
SREBF1-206ENST00000423161 KCNQ2O43526 872 aa25.89■■□□□ 1.74
SREBF1-206ENST00000423161 LTV1Q96GA3 475 aaPredicted RBP25.89■■□□□ 1.74
SREBF1-206ENST00000423161 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
SREBF1-206ENST00000423161 ACSBG1Q96GR2 724 aa25.88■■□□□ 1.73
SREBF1-206ENST00000423161 SPON1Q9HCB6 807 aa25.88■■□□□ 1.73
SREBF1-206ENST00000423161 TXNRD1Q16881 649 aa25.87■■□□□ 1.73
SREBF1-206ENST00000423161 MYOM1P52179 1685 aa25.87■■□□□ 1.73
SREBF1-206ENST00000423161 FBLN1P23142 703 aa25.86■■□□□ 1.73
SREBF1-206ENST00000423161 AMPHP49418 695 aa25.86■■□□□ 1.73
SREBF1-206ENST00000423161 HOXC9P31274 260 aa25.85■■□□□ 1.73
SREBF1-206ENST00000423161 CDCA8Q53HL2 280 aa25.83■■□□□ 1.73
SREBF1-206ENST00000423161 PPP1R1BQ9UD71 204 aaPredicted RBP25.83■■□□□ 1.73
SREBF1-206ENST00000423161 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
SREBF1-206ENST00000423161 FYB1O15117 783 aa25.82■■□□□ 1.72
SREBF1-206ENST00000423161 GGNBP2Q9H3C7 697 aa25.82■■□□□ 1.72
SREBF1-206ENST00000423161 SHANK3Q9BYB0 1731 aa25.82■■□□□ 1.72
SREBF1-206ENST00000423161 STK32BQ9NY57 414 aa25.81■■□□□ 1.72
SREBF1-206ENST00000423161 TIMELESSQ9UNS1 1208 aa25.8■■□□□ 1.72
SREBF1-206ENST00000423161 DOT1LQ8TEK3 1739 aa25.8■■□□□ 1.72
SREBF1-206ENST00000423161 PAPPAQ13219 1627 aa25.79■■□□□ 1.72
SREBF1-206ENST00000423161 RRS1Q15050 365 aaKnown RBP25.79■■□□□ 1.72
SREBF1-206ENST00000423161 PDGFDQ9GZP0 370 aaPredicted RBP25.79■■□□□ 1.72
SREBF1-206ENST00000423161 SLC15A2Q16348 729 aa25.78■■□□□ 1.72
SREBF1-206ENST00000423161 DDX54Q8TDD1 881 aaKnown RBP25.78■■□□□ 1.72
SREBF1-206ENST00000423161 CLSPNQ9HAW4 1339 aa25.78■■□□□ 1.72
SREBF1-206ENST00000423161 PCGF6Q9BYE7 350 aa25.77■■□□□ 1.72
SREBF1-206ENST00000423161 MEGF6O75095 1541 aa25.76■■□□□ 1.71
SREBF1-206ENST00000423161 SMG6Q86US8 1419 aaKnown RBP25.75■■□□□ 1.71
SREBF1-206ENST00000423161 ZBTB7AO95365 584 aa25.74■■□□□ 1.71
SREBF1-206ENST00000423161 NSD3Q9BZ95 1437 aa25.72■■□□□ 1.71
SREBF1-206ENST00000423161 NBPF6Q5VWK0 638 aa25.71■■□□□ 1.71
SREBF1-206ENST00000423161 ZCRB1Q8TBF4 217 aaKnown RBP25.71■■□□□ 1.71
SREBF1-206ENST00000423161 NBPF4Q96M43 638 aa25.71■■□□□ 1.71
SREBF1-206ENST00000423161 CARD14Q9BXL6 1004 aa25.7■■□□□ 1.7
SREBF1-206ENST00000423161 INSRP06213 1382 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms