RNA–Protein interactions for RNA: ENST00000421421.1

GAPDHP49-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 49, humanhuman

BASIC

Gene GAPDHP49, Length 961 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP49-201ENST00000421421 ACTN4O43707 911 aaKnown RBP8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 NR6A1Q15406 480 aa8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 PUS10Q3MIT2 529 aaKnown RBP8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 ZNF598Q86UK7 904 aaKnown RBP8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 KCTD17Q8N5Z5 321 aa8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 PRR14Q9BWN1 585 aa8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 SHROOM2Q13796 1616 aa8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 Q3C1V9 767 aa8.01□□□□□ -1.13
GAPDHP49-201ENST00000421421 EMID1Q96A84 441 aaPredicted RBP8.01□□□□□ -1.13
GAPDHP49-201ENST00000421421 SLC27A5Q9Y2P5 690 aa8.01□□□□□ -1.13
GAPDHP49-201ENST00000421421 PBRM1Q86U86 1689 aa8.01□□□□□ -1.13
GAPDHP49-201ENST00000421421 ADAMTS12P58397 1594 aa8.01□□□□□ -1.13
GAPDHP49-201ENST00000421421 PER1O15534 1290 aaPredicted RBP8□□□□□ -1.13
GAPDHP49-201ENST00000421421 RFX1P22670 979 aa8□□□□□ -1.13
GAPDHP49-201ENST00000421421 PBXIP1Q96AQ6 731 aa8□□□□□ -1.13
GAPDHP49-201ENST00000421421 ALG2Q9H553 416 aa8□□□□□ -1.13
GAPDHP49-201ENST00000421421 FAM187AA6NFU0 413 aa7.99□□□□□ -1.13
GAPDHP49-201ENST00000421421 CFAP70Q5T0N1 1121 aa7.99□□□□□ -1.13
GAPDHP49-201ENST00000421421 DESI1Q6ICB0 168 aa7.99□□□□□ -1.13
GAPDHP49-201ENST00000421421 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
GAPDHP49-201ENST00000421421 PPP1R12CQ9BZL4 782 aa7.99□□□□□ -1.13
GAPDHP49-201ENST00000421421 ERICH3Q5RHP9 1530 aa7.98□□□□□ -1.13
GAPDHP49-201ENST00000421421 SOX11P35716 441 aa7.98□□□□□ -1.13
GAPDHP49-201ENST00000421421 ANKLE1Q8NAG6 615 aa7.98□□□□□ -1.13
GAPDHP49-201ENST00000421421 PCDHB3Q9Y5E6 796 aa7.98□□□□□ -1.13
GAPDHP49-201ENST00000421421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.97□□□□□ -1.13
GAPDHP49-201ENST00000421421 PDE4CQ08493 712 aa7.97□□□□□ -1.13
GAPDHP49-201ENST00000421421 ZNF697Q5TEC3 545 aa7.97□□□□□ -1.13
GAPDHP49-201ENST00000421421 LYPD8Q6UX82 237 aa7.97□□□□□ -1.13
GAPDHP49-201ENST00000421421 PNMA1Q8ND90 353 aa7.97□□□□□ -1.13
GAPDHP49-201ENST00000421421 CCDC9Q9Y3X0 531 aaKnown RBP7.97□□□□□ -1.13
GAPDHP49-201ENST00000421421 IGF1RP08069 1367 aa7.97□□□□□ -1.13
GAPDHP49-201ENST00000421421 PALM3A6NDB9 673 aaPredicted RBP7.96□□□□□ -1.14
GAPDHP49-201ENST00000421421 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
GAPDHP49-201ENST00000421421 BLOC1S3Q6QNY0 202 aa7.96□□□□□ -1.14
GAPDHP49-201ENST00000421421 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.14
GAPDHP49-201ENST00000421421 MAPKBP1O60336 1514 aa7.95□□□□□ -1.14
GAPDHP49-201ENST00000421421 GDF9O60383 454 aa7.95□□□□□ -1.14
GAPDHP49-201ENST00000421421 SRPK2P78362 688 aaKnown RBP7.95□□□□□ -1.14
GAPDHP49-201ENST00000421421 USB1Q9BQ65 265 aaKnown RBP7.95□□□□□ -1.14
GAPDHP49-201ENST00000421421 AAASQ9NRG9 546 aa7.95□□□□□ -1.14
GAPDHP49-201ENST00000421421 TOP2BQ02880 1626 aa7.95□□□□□ -1.14
GAPDHP49-201ENST00000421421 TNFRSF10AO00220 468 aa7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 LMOD1P29536 600 aaPredicted RBP7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 BRICD5Q6PL45 260 aa7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 LIAT1Q6ZQX7 453 aa7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 TFIP11Q9UBB9 837 aaKnown RBP7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 STK17AQ9UEE5 414 aa7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 SALL2Q9Y467 1007 aaPredicted RBP7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 KIF13AQ9H1H9 1805 aa7.94□□□□□ -1.14
GAPDHP49-201ENST00000421421 ST8SIA5O15466 376 aa7.93□□□□□ -1.14
GAPDHP49-201ENST00000421421 EIF4G2P78344 907 aaKnown RBP eCLIP7.93□□□□□ -1.14
GAPDHP49-201ENST00000421421 KIAA0586Q9BVV6 1533 aa7.93□□□□□ -1.14
GAPDHP49-201ENST00000421421 WFS1O76024 890 aa7.92□□□□□ -1.14
GAPDHP49-201ENST00000421421 FMNL1O95466 1100 aaPredicted RBP7.92□□□□□ -1.14
GAPDHP49-201ENST00000421421 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
GAPDHP49-201ENST00000421421 NR1H3Q13133 447 aa7.92□□□□□ -1.14
GAPDHP49-201ENST00000421421 SCUBE3Q8IX30 993 aa7.92□□□□□ -1.14
GAPDHP49-201ENST00000421421 PTPRGP23470 1445 aa7.92□□□□□ -1.14
GAPDHP49-201ENST00000421421 DIP2BQ9P265 1576 aa7.92□□□□□ -1.14
GAPDHP49-201ENST00000421421 BIVM-ERCC5R4GMW8 1640 aa7.92□□□□□ -1.14
GAPDHP49-201ENST00000421421 TLL1O43897 1013 aa7.91□□□□□ -1.14
GAPDHP49-201ENST00000421421 FKBPLQ9UIM3 349 aa7.91□□□□□ -1.14
GAPDHP49-201ENST00000421421 USTQ9Y2C2 406 aa7.91□□□□□ -1.14
GAPDHP49-201ENST00000421421 ADCY10Q96PN6 1610 aa7.91□□□□□ -1.14
GAPDHP49-201ENST00000421421 PPEF1O14829 653 aaPredicted RBP7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 NR1I2O75469 434 aa7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 S1PR4O95977 384 aa7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 F12P00748 615 aaPredicted RBP7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 FBXO45P0C2W1 286 aa7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 JUNDP17535 347 aa7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 TBC1D9Q6ZT07 1266 aa7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 CRIPAKQ8N1N5 446 aa7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 THAP11Q96EK4 314 aa7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 MAFBQ9Y5Q3 323 aaPredicted RBP7.9□□□□□ -1.14
GAPDHP49-201ENST00000421421 COL17A1Q9UMD9 1497 aaPredicted RBP7.89□□□□□ -1.15
GAPDHP49-201ENST00000421421 ZBBXA8MT70 800 aa7.89□□□□□ -1.15
GAPDHP49-201ENST00000421421 RANGAP1P46060 587 aaPredicted RBP7.89□□□□□ -1.15
GAPDHP49-201ENST00000421421 PTPRNQ16849 979 aa7.89□□□□□ -1.15
GAPDHP49-201ENST00000421421 CDCA8Q53HL2 280 aa7.89□□□□□ -1.15
GAPDHP49-201ENST00000421421 NPM2Q86SE8 214 aaKnown RBP7.89□□□□□ -1.15
GAPDHP49-201ENST00000421421 RUSC2Q8N2Y8 1516 aa7.88□□□□□ -1.15
GAPDHP49-201ENST00000421421 ATP9BO43861 1147 aa7.88□□□□□ -1.15
GAPDHP49-201ENST00000421421 INSM1Q01101 510 aaPredicted RBP7.88□□□□□ -1.15
GAPDHP49-201ENST00000421421 MAP10Q9P2G4 905 aa7.88□□□□□ -1.15
GAPDHP49-201ENST00000421421 TNIKQ9UKE5 1360 aa7.87□□□□□ -1.15
GAPDHP49-201ENST00000421421 ZC3H4Q9UPT8 1303 aaKnown RBP7.87□□□□□ -1.15
GAPDHP49-201ENST00000421421 WIPF1O43516 503 aa7.87□□□□□ -1.15
GAPDHP49-201ENST00000421421 ATG7O95352 703 aa7.87□□□□□ -1.15
GAPDHP49-201ENST00000421421 CTHP32929 405 aa7.87□□□□□ -1.15
GAPDHP49-201ENST00000421421 GZF1Q9H116 711 aaPredicted RBP7.87□□□□□ -1.15
GAPDHP49-201ENST00000421421 KDM6BO15054 1643 aa7.87□□□□□ -1.15
GAPDHP49-201ENST00000421421 ASXL2Q76L83 1435 aa7.86□□□□□ -1.15
GAPDHP49-201ENST00000421421 CARNS1A5YM72 827 aa7.86□□□□□ -1.15
GAPDHP49-201ENST00000421421 PATL2C9JE40 543 aaKnown RBP7.86□□□□□ -1.15
GAPDHP49-201ENST00000421421 BRD1O95696 1058 aa7.86□□□□□ -1.15
GAPDHP49-201ENST00000421421 ADH1BP00325 375 aa7.86□□□□□ -1.15
GAPDHP49-201ENST00000421421 CARMIL1Q5VZK9 1371 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms