RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
SEMA4D-204ENST00000420101 CDK12Q9NYV4 1490 aaPredicted RBP18.93■□□□□ 0.62
SEMA4D-204ENST00000420101 FOXO3O43524 673 aa18.93■□□□□ 0.62
SEMA4D-204ENST00000420101 CENPQQ7L2Z9 268 aaPredicted RBP18.93■□□□□ 0.62
SEMA4D-204ENST00000420101 HMOX1P09601 288 aa18.91■□□□□ 0.62
SEMA4D-204ENST00000420101 XPCQ01831 940 aaPredicted RBP18.91■□□□□ 0.62
SEMA4D-204ENST00000420101 FAM161AQ3B820 660 aa18.91■□□□□ 0.62
SEMA4D-204ENST00000420101 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
SEMA4D-204ENST00000420101 ZNF521Q96K83 1311 aa18.91■□□□□ 0.62
SEMA4D-204ENST00000420101 IL13P35225 146 aa18.9■□□□□ 0.62
SEMA4D-204ENST00000420101 AMPHP49418 695 aa18.9■□□□□ 0.62
SEMA4D-204ENST00000420101 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
SEMA4D-204ENST00000420101 USP31Q70CQ4 1352 aa18.9■□□□□ 0.62
SEMA4D-204ENST00000420101 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
SEMA4D-204ENST00000420101 FCHSD2O94868 740 aa18.9■□□□□ 0.62
SEMA4D-204ENST00000420101 CADPS2Q86UW7 1296 aa18.9■□□□□ 0.62
SEMA4D-204ENST00000420101 MSH6P52701 1360 aa18.9■□□□□ 0.62
SEMA4D-204ENST00000420101 E9PSI1 815 aa18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 PRKAR2BP31323 418 aa18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 SLFN5Q08AF3 891 aa18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 C1orf167Q5SNV9 1468 aa18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 KDM2BQ8NHM5 1336 aa18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 PLEKHF1Q96S99 279 aa18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 MAP3K19Q56UN5 1328 aa18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 EIF5BO60841 1220 aaKnown RBP18.88■□□□□ 0.61
SEMA4D-204ENST00000420101 L1TD1Q5T7N2 865 aaKnown RBP18.87■□□□□ 0.61
SEMA4D-204ENST00000420101 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
SEMA4D-204ENST00000420101 IQSEC2Q5JU85 1478 aa18.87■□□□□ 0.61
SEMA4D-204ENST00000420101 VIRMAQ69YN4 1812 aaKnown RBP18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 HSP90AB2PQ58FF8 381 aa18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 KRT28Q7Z3Y7 464 aa18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 PIK3C2AO00443 1686 aa18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 ZBTB7CA1YPR0 619 aa18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 EIF4A2Q14240 407 aaKnown RBP18.86■□□□□ 0.61
SEMA4D-204ENST00000420101 RIPK4P57078 832 aa18.85■□□□□ 0.61
SEMA4D-204ENST00000420101 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
SEMA4D-204ENST00000420101 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
SEMA4D-204ENST00000420101 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
SEMA4D-204ENST00000420101 DCCP43146 1447 aa18.84■□□□□ 0.61
SEMA4D-204ENST00000420101 SBNO1A3KN83 1393 aa18.84■□□□□ 0.61
SEMA4D-204ENST00000420101 WDR63Q8IWG1 891 aa18.84■□□□□ 0.61
SEMA4D-204ENST00000420101 FLT4P35916 1363 aa18.83■□□□□ 0.61
SEMA4D-204ENST00000420101 MST1RQ04912 1400 aa18.83■□□□□ 0.6
SEMA4D-204ENST00000420101 SULT6B1Q6IMI4 303 aa18.81■□□□□ 0.6
SEMA4D-204ENST00000420101 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.81■□□□□ 0.6
SEMA4D-204ENST00000420101 LRRC7Q96NW7 1537 aa18.81■□□□□ 0.6
SEMA4D-204ENST00000420101 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
SEMA4D-204ENST00000420101 KCNH5Q8NCM2 988 aa18.81■□□□□ 0.6
SEMA4D-204ENST00000420101 KIF1AQ12756 1690 aa18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 TRMT2AQ8IZ69 625 aaKnown RBP18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 DDX17Q92841 729 aaKnown RBP18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 LTV1Q96GA3 475 aaPredicted RBP18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 CRBNQ96SW2 442 aa18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 HOXC9P31274 260 aa18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 PHACTR3Q96KR7 559 aa18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
SEMA4D-204ENST00000420101 NFE2L2Q16236 605 aa18.78■□□□□ 0.6
SEMA4D-204ENST00000420101 PEAK1Q9H792 1746 aa18.78■□□□□ 0.6
SEMA4D-204ENST00000420101 C8orf34Q49A92 452 aa18.77■□□□□ 0.6
SEMA4D-204ENST00000420101 AEBP1Q8IUX7 1158 aa18.77■□□□□ 0.6
SEMA4D-204ENST00000420101 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
SEMA4D-204ENST00000420101 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.6
SEMA4D-204ENST00000420101 GCP02774 474 aa18.75■□□□□ 0.59
SEMA4D-204ENST00000420101 BECN1Q14457 450 aa18.75■□□□□ 0.59
SEMA4D-204ENST00000420101 KIF24Q5T7B8 1368 aa18.75■□□□□ 0.59
SEMA4D-204ENST00000420101 PLIN1O60240 522 aa18.74■□□□□ 0.59
SEMA4D-204ENST00000420101 FRAT2O75474 233 aaPredicted RBP18.74■□□□□ 0.59
SEMA4D-204ENST00000420101 LMOD3Q0VAK6 560 aa18.74■□□□□ 0.59
SEMA4D-204ENST00000420101 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
SEMA4D-204ENST00000420101 ARHGEF10O15013 1369 aa18.73■□□□□ 0.59
SEMA4D-204ENST00000420101 USP54Q70EL1 1684 aa18.72■□□□□ 0.59
SEMA4D-204ENST00000420101 IP6K1Q92551 441 aa18.72■□□□□ 0.59
SEMA4D-204ENST00000420101 EYA1Q99502 592 aa18.72■□□□□ 0.59
SEMA4D-204ENST00000420101 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
SEMA4D-204ENST00000420101 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
SEMA4D-204ENST00000420101 BRINP3Q76B58 766 aa18.72■□□□□ 0.59
SEMA4D-204ENST00000420101 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
SEMA4D-204ENST00000420101 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
SEMA4D-204ENST00000420101 IL16Q14005 1332 aa18.7■□□□□ 0.58
SEMA4D-204ENST00000420101 PKNOX2Q96KN3 472 aa18.7■□□□□ 0.58
SEMA4D-204ENST00000420101 CANXP27824 592 aaKnown RBP18.69■□□□□ 0.58
SEMA4D-204ENST00000420101 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
SEMA4D-204ENST00000420101 XIRP1Q702N8 1843 aaKnown RBP18.68■□□□□ 0.58
SEMA4D-204ENST00000420101 USP19O94966 1318 aa18.68■□□□□ 0.58
SEMA4D-204ENST00000420101 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
SEMA4D-204ENST00000420101 RRP9O43818 475 aaKnown RBP18.68■□□□□ 0.58
SEMA4D-204ENST00000420101 ZC3H6P61129 1189 aaKnown RBP18.68■□□□□ 0.58
SEMA4D-204ENST00000420101 NFAT5O94916 1531 aa18.68■□□□□ 0.58
SEMA4D-204ENST00000420101 TRPM3Q9HCF6 1732 aaPredicted RBP18.68■□□□□ 0.58
SEMA4D-204ENST00000420101 ARHGEF25Q86VW2 580 aa18.67■□□□□ 0.58
SEMA4D-204ENST00000420101 BCAR3O75815 825 aa18.67■□□□□ 0.58
SEMA4D-204ENST00000420101 USHBP1Q8N6Y0 703 aa18.67■□□□□ 0.58
SEMA4D-204ENST00000420101 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
SEMA4D-204ENST00000420101 TNS3Q68CZ2 1445 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms