RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 SLIT3O75094 1523 aa13.37□□□□□ -0.27
NUP50-205ENST00000419387 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
NUP50-205ENST00000419387 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
NUP50-205ENST00000419387 PIK3C2AO00443 1686 aa13.35□□□□□ -0.27
NUP50-205ENST00000419387 EN1Q05925 392 aaPredicted RBP13.35□□□□□ -0.27
NUP50-205ENST00000419387 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
NUP50-205ENST00000419387 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
NUP50-205ENST00000419387 CRB1P82279 1406 aa13.34□□□□□ -0.27
NUP50-205ENST00000419387 TRIM37O94972 964 aa13.34□□□□□ -0.27
NUP50-205ENST00000419387 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
NUP50-205ENST00000419387 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
NUP50-205ENST00000419387 AKAP12Q02952 1782 aa13.34□□□□□ -0.27
NUP50-205ENST00000419387 SOX12O15370 315 aa13.33□□□□□ -0.28
NUP50-205ENST00000419387 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
NUP50-205ENST00000419387 HDGFL2Q7Z4V5 671 aaPredicted RBP13.33□□□□□ -0.28
NUP50-205ENST00000419387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.28
NUP50-205ENST00000419387 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
NUP50-205ENST00000419387 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.28
NUP50-205ENST00000419387 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
NUP50-205ENST00000419387 DISP2A7MBM2 1401 aa13.31□□□□□ -0.28
NUP50-205ENST00000419387 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
NUP50-205ENST00000419387 APBA3O96018 575 aa13.31□□□□□ -0.28
NUP50-205ENST00000419387 EZH2Q15910 746 aaKnown RBP13.31□□□□□ -0.28
NUP50-205ENST00000419387 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
NUP50-205ENST00000419387 TESK2Q96S53 571 aa13.31□□□□□ -0.28
NUP50-205ENST00000419387 TERF2IPQ9NYB0 399 aa13.31□□□□□ -0.28
NUP50-205ENST00000419387 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
NUP50-205ENST00000419387 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
NUP50-205ENST00000419387 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
NUP50-205ENST00000419387 COL18A1P39060 1754 aa13.3□□□□□ -0.28
NUP50-205ENST00000419387 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
NUP50-205ENST00000419387 NME9Q86XW9 330 aa13.3□□□□□ -0.28
NUP50-205ENST00000419387 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
NUP50-205ENST00000419387 CSB-PGBD3P0DP91 1061 aa13.29□□□□□ -0.28
NUP50-205ENST00000419387 DDB1Q16531 1140 aa13.29□□□□□ -0.28
NUP50-205ENST00000419387 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
NUP50-205ENST00000419387 MON2Q7Z3U7 1717 aa13.28□□□□□ -0.28
NUP50-205ENST00000419387 CDCA7Q9BWT1 371 aaPredicted RBP13.28□□□□□ -0.28
NUP50-205ENST00000419387 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
NUP50-205ENST00000419387 NFAT5O94916 1531 aa13.28□□□□□ -0.28
NUP50-205ENST00000419387 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.28
NUP50-205ENST00000419387 PARP4Q9UKK3 1724 aaKnown RBP13.27□□□□□ -0.28
NUP50-205ENST00000419387 A0A1W2PP64 1363 aa13.27□□□□□ -0.29
NUP50-205ENST00000419387 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
NUP50-205ENST00000419387 PCGF6Q9BYE7 350 aa13.26□□□□□ -0.29
NUP50-205ENST00000419387 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
NUP50-205ENST00000419387 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
NUP50-205ENST00000419387 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
NUP50-205ENST00000419387 NINLQ9Y2I6 1382 aa13.25□□□□□ -0.29
NUP50-205ENST00000419387 EXOC5O00471 708 aa13.25□□□□□ -0.29
NUP50-205ENST00000419387 R3HDM1Q15032 1099 aaKnown RBP13.25□□□□□ -0.29
NUP50-205ENST00000419387 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
NUP50-205ENST00000419387 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
NUP50-205ENST00000419387 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
NUP50-205ENST00000419387 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
NUP50-205ENST00000419387 ABCC6O95255 1503 aa13.23□□□□□ -0.29
NUP50-205ENST00000419387 TMF1P82094 1093 aa13.23□□□□□ -0.29
NUP50-205ENST00000419387 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
NUP50-205ENST00000419387 USP54Q70EL1 1684 aa13.23□□□□□ -0.29
NUP50-205ENST00000419387 SRCAPQ6ZRS2 3230 aa13.22□□□□□ -0.29
NUP50-205ENST00000419387 USP47Q96K76 1375 aa13.22□□□□□ -0.29
NUP50-205ENST00000419387 ERBB3P21860 1342 aa13.22□□□□□ -0.29
NUP50-205ENST00000419387 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
NUP50-205ENST00000419387 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
NUP50-205ENST00000419387 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
NUP50-205ENST00000419387 COG3Q96JB2 828 aa13.22□□□□□ -0.29
NUP50-205ENST00000419387 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
NUP50-205ENST00000419387 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
NUP50-205ENST00000419387 PLSCR1O15162 318 aa13.21□□□□□ -0.29
NUP50-205ENST00000419387 IP6K1Q92551 441 aa13.21□□□□□ -0.29
NUP50-205ENST00000419387 PEAK1Q9H792 1746 aa13.21□□□□□ -0.3
NUP50-205ENST00000419387 BCL9O00512 1426 aa13.21□□□□□ -0.3
NUP50-205ENST00000419387 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
NUP50-205ENST00000419387 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
NUP50-205ENST00000419387 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
NUP50-205ENST00000419387 IL2RBP14784 551 aa13.19□□□□□ -0.3
NUP50-205ENST00000419387 CDCA8Q53HL2 280 aa13.19□□□□□ -0.3
NUP50-205ENST00000419387 PTF1AQ7RTS3 328 aa13.19□□□□□ -0.3
NUP50-205ENST00000419387 LRP5O75197 1615 aa13.19□□□□□ -0.3
NUP50-205ENST00000419387 RREB1Q92766 1687 aa13.18□□□□□ -0.3
NUP50-205ENST00000419387 LTN1O94822 1766 aa13.17□□□□□ -0.3
NUP50-205ENST00000419387 FYB1O15117 783 aa13.17□□□□□ -0.3
NUP50-205ENST00000419387 FBLN1P23142 703 aa13.17□□□□□ -0.3
NUP50-205ENST00000419387 SBF2Q86WG5 1849 aa13.17□□□□□ -0.3
NUP50-205ENST00000419387 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
NUP50-205ENST00000419387 TNS2Q63HR2 1409 aa13.16□□□□□ -0.3
NUP50-205ENST00000419387 AMPHP49418 695 aa13.16□□□□□ -0.3
NUP50-205ENST00000419387 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
NUP50-205ENST00000419387 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
NUP50-205ENST00000419387 KCNQ2O43526 872 aa13.15□□□□□ -0.3
NUP50-205ENST00000419387 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
NUP50-205ENST00000419387 HOXC9P31274 260 aa13.15□□□□□ -0.3
NUP50-205ENST00000419387 PROM2Q8N271 834 aa13.15□□□□□ -0.3
NUP50-205ENST00000419387 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
NUP50-205ENST00000419387 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
NUP50-205ENST00000419387 RRS1Q15050 365 aaKnown RBP13.13□□□□□ -0.31
NUP50-205ENST00000419387 RGPD3A6NKT7 1758 aaPredicted RBP13.12□□□□□ -0.31
NUP50-205ENST00000419387 RGPD4Q7Z3J3 1758 aa13.12□□□□□ -0.31
NUP50-205ENST00000419387 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
NUP50-205ENST00000419387 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms