RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-202ENST00000419300 RPRD2Q5VT52 1461 aaKnown RBP11.91□□□□□ -0.5
LINC00963-202ENST00000419300 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
LINC00963-202ENST00000419300 PDILTQ8N807 584 aa11.9□□□□□ -0.5
LINC00963-202ENST00000419300 LRPPRCP42704 1394 aaKnown RBP11.9□□□□□ -0.5
LINC00963-202ENST00000419300 CCDC30Q5VVM6 783 aa11.9□□□□□ -0.5
LINC00963-202ENST00000419300 CYP46A1Q9Y6A2 500 aa11.9□□□□□ -0.5
LINC00963-202ENST00000419300 CCDC183Q5T5S1 534 aa11.9□□□□□ -0.5
LINC00963-202ENST00000419300 TRAK1Q9UPV9 953 aa11.9□□□□□ -0.5
LINC00963-202ENST00000419300 NAIPQ13075 1403 aa11.9□□□□□ -0.5
LINC00963-202ENST00000419300 PRIMPOLQ96LW4 560 aa11.9□□□□□ -0.5
LINC00963-202ENST00000419300 NSD2O96028 1365 aa11.9□□□□□ -0.5
LINC00963-202ENST00000419300 PPP2R1AP30153 589 aa11.9□□□□□ -0.51
LINC00963-202ENST00000419300 ABCA10Q8WWZ4 1543 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 SMTNL1A8MU46 457 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 GNAI2P04899 355 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 NEK4P51957 841 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 PPFIBP1Q86W92 1011 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 ATAD2Q6PL18 1390 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 CT47A1Q5JQC4 288 aaPredicted RBP11.89□□□□□ -0.51
LINC00963-202ENST00000419300 ANKRD18AQ8IVF6 992 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 ADAMTS8Q9UP79 889 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 KRT32Q14532 448 aa11.89□□□□□ -0.51
LINC00963-202ENST00000419300 IFT140Q96RY7 1462 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 MRC2Q9UBG0 1479 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 SHROOM2Q13796 1616 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 LRRCC1Q9C099 1032 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 PATL2C9JE40 543 aaKnown RBP11.88□□□□□ -0.51
LINC00963-202ENST00000419300 ZSCAN12O43309 604 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 SLC3A2P08195 630 aaKnown RBP11.88□□□□□ -0.51
LINC00963-202ENST00000419300 CHD1LQ86WJ1 897 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 RNF214Q8ND24 703 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 PPP6R1Q9UPN7 881 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 ANKRD30BQ9BXX2 1392 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 AEBP2Q6ZN18 517 aaPredicted RBP11.88□□□□□ -0.51
LINC00963-202ENST00000419300 PDZRN3Q9UPQ7 1066 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 KIF18AQ8NI77 898 aa11.88□□□□□ -0.51
LINC00963-202ENST00000419300 HS1BP3Q53T59 392 aa11.87□□□□□ -0.51
LINC00963-202ENST00000419300 ODF2Q5BJF6 829 aa11.87□□□□□ -0.51
LINC00963-202ENST00000419300 MAPKBP1O60336 1514 aa11.87□□□□□ -0.51
LINC00963-202ENST00000419300 HMGB2P26583 209 aaKnown RBP11.87□□□□□ -0.51
LINC00963-202ENST00000419300 CLASRPQ8N2M8 674 aaKnown RBP11.87□□□□□ -0.51
LINC00963-202ENST00000419300 MAP3K11Q16584 847 aa11.87□□□□□ -0.51
LINC00963-202ENST00000419300 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
LINC00963-202ENST00000419300 TSPYL4Q9UJ04 414 aa11.87□□□□□ -0.51
LINC00963-202ENST00000419300 GOLGA6L9A6NEM1 432 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 CTAGE5O15320 804 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 OFD1O75665 1012 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
LINC00963-202ENST00000419300 GAS2L2Q8NHY3 880 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 FIBPO43427 364 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 NUP62CLQ9H1M0 184 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 UGGT2Q9NYU1 1516 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 TRIM34Q9BYJ4 488 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 PAXBP1Q9Y5B6 917 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 GSDMDP57764 484 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 VPS37DQ86XT2 251 aa11.86□□□□□ -0.51
LINC00963-202ENST00000419300 SH2B1Q9NRF2 756 aaPredicted RBP11.86□□□□□ -0.51
LINC00963-202ENST00000419300 SERPINC1P01008 464 aa11.85□□□□□ -0.51
LINC00963-202ENST00000419300 TUBB4BP68371 445 aa11.85□□□□□ -0.51
LINC00963-202ENST00000419300 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC00963-202ENST00000419300 STK38Q15208 465 aa11.85□□□□□ -0.51
LINC00963-202ENST00000419300 POLR3GO15318 223 aaPredicted RBP11.85□□□□□ -0.51
LINC00963-202ENST00000419300 HSP90AB2PQ58FF8 381 aa11.85□□□□□ -0.51
LINC00963-202ENST00000419300 CCDC43Q96MW1 224 aaKnown RBP11.85□□□□□ -0.51
LINC00963-202ENST00000419300 SLC26A8Q96RN1 970 aa11.85□□□□□ -0.51
LINC00963-202ENST00000419300 FSD1Q9BTV5 496 aa11.85□□□□□ -0.51
LINC00963-202ENST00000419300 STK11IPQ8N1F8 1099 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 MICALCLQ6ZW33 695 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 SCAND2PQ9GZW5 306 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-202ENST00000419300 FILIP1Q7Z7B0 1213 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 CCDC148Q8NFR7 591 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 SHTN1A0MZ66 631 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 SPATA32Q96LK8 384 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 PLXNC1O60486 1568 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 GOLGA6L10A0A0M3HER8 536 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 TUBB4AP04350 444 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 TMCO3Q6UWJ1 677 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 SFPQP23246 707 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00963-202ENST00000419300 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
LINC00963-202ENST00000419300 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.51
LINC00963-202ENST00000419300 TCP11L2Q8N4U5 519 aa11.83□□□□□ -0.52
LINC00963-202ENST00000419300 WASF1Q92558 559 aa11.83□□□□□ -0.52
LINC00963-202ENST00000419300 TRIM22Q8IYM9 498 aa11.83□□□□□ -0.52
LINC00963-202ENST00000419300 LUZP1Q86V48 1076 aa11.83□□□□□ -0.52
LINC00963-202ENST00000419300 NOB1Q9ULX3 412 aaKnown RBP11.83□□□□□ -0.52
LINC00963-202ENST00000419300 G3V3G9 751 aa11.83□□□□□ -0.52
LINC00963-202ENST00000419300 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
LINC00963-202ENST00000419300 TBC1D2BQ9UPU7 963 aa11.83□□□□□ -0.52
LINC00963-202ENST00000419300 ME1P48163 572 aa11.83□□□□□ -0.52
LINC00963-202ENST00000419300 RBM10P98175 930 aaKnown RBP11.83□□□□□ -0.52
LINC00963-202ENST00000419300 CCDC181Q5TID7 509 aa11.82□□□□□ -0.52
LINC00963-202ENST00000419300 UBXN4Q92575 508 aa11.82□□□□□ -0.52
LINC00963-202ENST00000419300 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
LINC00963-202ENST00000419300 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
LINC00963-202ENST00000419300 NUP160Q12769 1436 aa11.82□□□□□ -0.52
LINC00963-202ENST00000419300 CEP131Q9UPN4 1083 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms