RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
DEPDC4-203ENST00000416321 FLT4P35916 1363 aa13.46□□□□□ -0.25
DEPDC4-203ENST00000416321 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.25
DEPDC4-203ENST00000416321 MAP3K19Q56UN5 1328 aa13.46□□□□□ -0.25
DEPDC4-203ENST00000416321 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
DEPDC4-203ENST00000416321 CCDC146Q8IYE0 955 aa13.46□□□□□ -0.25
DEPDC4-203ENST00000416321 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
DEPDC4-203ENST00000416321 NHSL1Q5SYE7 1610 aa13.45□□□□□ -0.26
DEPDC4-203ENST00000416321 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
DEPDC4-203ENST00000416321 SLIT3O75094 1523 aa13.44□□□□□ -0.26
DEPDC4-203ENST00000416321 SPATA31A3Q5VYP0 1347 aa13.44□□□□□ -0.26
DEPDC4-203ENST00000416321 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
DEPDC4-203ENST00000416321 TOM1O60784 492 aa13.44□□□□□ -0.26
DEPDC4-203ENST00000416321 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
DEPDC4-203ENST00000416321 USP19O94966 1318 aa13.43□□□□□ -0.26
DEPDC4-203ENST00000416321 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
DEPDC4-203ENST00000416321 LTN1O94822 1766 aa13.43□□□□□ -0.26
DEPDC4-203ENST00000416321 GCP02774 474 aa13.43□□□□□ -0.26
DEPDC4-203ENST00000416321 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
DEPDC4-203ENST00000416321 SALL2Q9Y467 1007 aaPredicted RBP13.43□□□□□ -0.26
DEPDC4-203ENST00000416321 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
DEPDC4-203ENST00000416321 NFAT5O94916 1531 aa13.43□□□□□ -0.26
DEPDC4-203ENST00000416321 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
DEPDC4-203ENST00000416321 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
DEPDC4-203ENST00000416321 IL13P35225 146 aa13.42□□□□□ -0.26
DEPDC4-203ENST00000416321 NGEFQ8N5V2 710 aa13.42□□□□□ -0.26
DEPDC4-203ENST00000416321 APAF1O14727 1248 aa13.41□□□□□ -0.26
DEPDC4-203ENST00000416321 FCHSD2O94868 740 aa13.41□□□□□ -0.26
DEPDC4-203ENST00000416321 HOXC9P31274 260 aa13.41□□□□□ -0.26
DEPDC4-203ENST00000416321 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
DEPDC4-203ENST00000416321 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
DEPDC4-203ENST00000416321 IQSEC2Q5JU85 1478 aa13.41□□□□□ -0.26
DEPDC4-203ENST00000416321 PHRF1Q9P1Y6 1649 aaKnown RBP13.4□□□□□ -0.26
DEPDC4-203ENST00000416321 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
DEPDC4-203ENST00000416321 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
DEPDC4-203ENST00000416321 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
DEPDC4-203ENST00000416321 PIP4K2BP78356 416 aa13.39□□□□□ -0.27
DEPDC4-203ENST00000416321 PDE3BQ13370 1112 aa13.39□□□□□ -0.27
DEPDC4-203ENST00000416321 IP6K1Q92551 441 aa13.39□□□□□ -0.27
DEPDC4-203ENST00000416321 HMOX1P09601 288 aa13.38□□□□□ -0.27
DEPDC4-203ENST00000416321 ARHGEF25Q86VW2 580 aa13.38□□□□□ -0.27
DEPDC4-203ENST00000416321 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
DEPDC4-203ENST00000416321 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
DEPDC4-203ENST00000416321 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
DEPDC4-203ENST00000416321 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
DEPDC4-203ENST00000416321 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
DEPDC4-203ENST00000416321 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
DEPDC4-203ENST00000416321 NEUROD2Q15784 382 aa13.36□□□□□ -0.27
DEPDC4-203ENST00000416321 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
DEPDC4-203ENST00000416321 CABLES1Q8TDN4 633 aa13.36□□□□□ -0.27
DEPDC4-203ENST00000416321 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
DEPDC4-203ENST00000416321 CERKQ8TCT0 537 aa13.35□□□□□ -0.27
DEPDC4-203ENST00000416321 RRP7AQ9Y3A4 280 aaKnown RBP13.35□□□□□ -0.27
DEPDC4-203ENST00000416321 CRYBG1Q9Y4K1 1723 aa13.35□□□□□ -0.27
DEPDC4-203ENST00000416321 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
DEPDC4-203ENST00000416321 ABCB7O75027 752 aa13.34□□□□□ -0.27
DEPDC4-203ENST00000416321 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
DEPDC4-203ENST00000416321 IGSF1Q8N6C5 1336 aa13.34□□□□□ -0.27
DEPDC4-203ENST00000416321 ABCC6O95255 1503 aa13.34□□□□□ -0.27
DEPDC4-203ENST00000416321 CPDO75976 1380 aa13.33□□□□□ -0.27
DEPDC4-203ENST00000416321 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
DEPDC4-203ENST00000416321 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
DEPDC4-203ENST00000416321 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
DEPDC4-203ENST00000416321 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
DEPDC4-203ENST00000416321 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
DEPDC4-203ENST00000416321 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
DEPDC4-203ENST00000416321 LMOD3Q0VAK6 560 aa13.32□□□□□ -0.28
DEPDC4-203ENST00000416321 AEBP1Q8IUX7 1158 aa13.32□□□□□ -0.28
DEPDC4-203ENST00000416321 ANKRD24Q8TF21 1146 aa13.32□□□□□ -0.28
DEPDC4-203ENST00000416321 EYA1Q99502 592 aa13.32□□□□□ -0.28
DEPDC4-203ENST00000416321 ABCA3Q99758 1704 aa13.32□□□□□ -0.28
DEPDC4-203ENST00000416321 RIPK4P57078 832 aa13.31□□□□□ -0.28
DEPDC4-203ENST00000416321 NFE2L2Q16236 605 aa13.31□□□□□ -0.28
DEPDC4-203ENST00000416321 CCDC27Q2M243 656 aa13.31□□□□□ -0.28
DEPDC4-203ENST00000416321 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
DEPDC4-203ENST00000416321 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
DEPDC4-203ENST00000416321 COL16A1Q07092 1604 aaPredicted RBP13.3□□□□□ -0.28
DEPDC4-203ENST00000416321 KDRP35968 1356 aa13.3□□□□□ -0.28
DEPDC4-203ENST00000416321 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
DEPDC4-203ENST00000416321 E9PSI1 815 aa13.29□□□□□ -0.28
DEPDC4-203ENST00000416321 WDR63Q8IWG1 891 aa13.29□□□□□ -0.28
DEPDC4-203ENST00000416321 ERBB3P21860 1342 aa13.29□□□□□ -0.28
DEPDC4-203ENST00000416321 ZNF521Q96K83 1311 aa13.29□□□□□ -0.28
DEPDC4-203ENST00000416321 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
DEPDC4-203ENST00000416321 RGPD5Q99666 1765 aa13.28□□□□□ -0.28
DEPDC4-203ENST00000416321 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
DEPDC4-203ENST00000416321 GAS2L2Q8NHY3 880 aa13.28□□□□□ -0.28
DEPDC4-203ENST00000416321 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
DEPDC4-203ENST00000416321 PHACTR3Q96KR7 559 aa13.28□□□□□ -0.28
DEPDC4-203ENST00000416321 NLRP2Q9NX02 1062 aa13.28□□□□□ -0.28
DEPDC4-203ENST00000416321 NEFLP07196 543 aa13.27□□□□□ -0.29
DEPDC4-203ENST00000416321 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.29
DEPDC4-203ENST00000416321 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.29
DEPDC4-203ENST00000416321 NBPF4Q96M43 638 aa13.27□□□□□ -0.29
DEPDC4-203ENST00000416321 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.29
DEPDC4-203ENST00000416321 COL18A1P39060 1754 aa13.27□□□□□ -0.29
DEPDC4-203ENST00000416321 MYH16Q9H6N6 1097 aa13.26□□□□□ -0.29
DEPDC4-203ENST00000416321 RGPD2P0DJD1 1756 aa13.25□□□□□ -0.29
DEPDC4-203ENST00000416321 EVA1CP58658 441 aa13.25□□□□□ -0.29
DEPDC4-203ENST00000416321 SLFN5Q08AF3 891 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms