RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.37
NUB1-201ENST00000413040 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.36
NUB1-201ENST00000413040 ZBTB7BO15156 539 aaPredicted RBP17.33■□□□□ 0.36
NUB1-201ENST00000413040 HSP90AA1P07900 732 aaKnown RBP17.33■□□□□ 0.36
NUB1-201ENST00000413040 ANTXR1Q9H6X2 564 aa17.32■□□□□ 0.36
NUB1-201ENST00000413040 IFT57Q9NWB7 429 aa17.32■□□□□ 0.36
NUB1-201ENST00000413040 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
NUB1-201ENST00000413040 FAM135BQ49AJ0 1406 aa17.31■□□□□ 0.36
NUB1-201ENST00000413040 A2ML1A8K2U0 1454 aa17.31■□□□□ 0.36
NUB1-201ENST00000413040 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
NUB1-201ENST00000413040 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
NUB1-201ENST00000413040 MED14O60244 1454 aa17.31■□□□□ 0.36
NUB1-201ENST00000413040 MCM10Q7L590 875 aa17.3■□□□□ 0.36
NUB1-201ENST00000413040 HDGFP51858 240 aaKnown RBP17.3■□□□□ 0.36
NUB1-201ENST00000413040 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
NUB1-201ENST00000413040 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
NUB1-201ENST00000413040 SLC26A8Q96RN1 970 aa17.29■□□□□ 0.36
NUB1-201ENST00000413040 CHMP4BQ9H444 224 aaKnown RBP17.29■□□□□ 0.36
NUB1-201ENST00000413040 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
NUB1-201ENST00000413040 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
NUB1-201ENST00000413040 CHMP5Q9NZZ3 219 aa17.28■□□□□ 0.36
NUB1-201ENST00000413040 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
NUB1-201ENST00000413040 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
NUB1-201ENST00000413040 EDC4Q6P2E9 1401 aaKnown RBP17.28■□□□□ 0.36
NUB1-201ENST00000413040 API5Q9BZZ5 524 aaKnown RBP17.27■□□□□ 0.36
NUB1-201ENST00000413040 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.35
NUB1-201ENST00000413040 GCC1Q96CN9 775 aa17.27■□□□□ 0.35
NUB1-201ENST00000413040 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.35
NUB1-201ENST00000413040 ZMYM3Q14202 1370 aa17.26■□□□□ 0.35
NUB1-201ENST00000413040 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
NUB1-201ENST00000413040 SIRT2Q8IXJ6 389 aa17.26■□□□□ 0.35
NUB1-201ENST00000413040 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
NUB1-201ENST00000413040 MCM4P33991 863 aa17.26■□□□□ 0.35
NUB1-201ENST00000413040 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
NUB1-201ENST00000413040 ATP7BP35670 1465 aa17.26■□□□□ 0.35
NUB1-201ENST00000413040 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
NUB1-201ENST00000413040 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
NUB1-201ENST00000413040 SLC4A10Q6U841 1118 aa17.24■□□□□ 0.35
NUB1-201ENST00000413040 CLTCQ00610 1675 aaKnown RBP17.24■□□□□ 0.35
NUB1-201ENST00000413040 ACEP12821 1306 aa17.24■□□□□ 0.35
NUB1-201ENST00000413040 ZNF853P0CG23 659 aa17.24■□□□□ 0.35
NUB1-201ENST00000413040 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
NUB1-201ENST00000413040 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.24■□□□□ 0.35
NUB1-201ENST00000413040 BMP2KLQ5H9B9 411 aa17.24■□□□□ 0.35
NUB1-201ENST00000413040 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
NUB1-201ENST00000413040 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
NUB1-201ENST00000413040 C16orf71Q8IYS4 520 aaPredicted RBP17.22■□□□□ 0.35
NUB1-201ENST00000413040 CPSF1Q10570 1443 aaKnown RBP17.22■□□□□ 0.35
NUB1-201ENST00000413040 TTC21BQ7Z4L5 1316 aa17.22■□□□□ 0.35
NUB1-201ENST00000413040 KIF20BQ96Q89 1820 aa17.22■□□□□ 0.35
NUB1-201ENST00000413040 CPS1P31327 1500 aa17.22■□□□□ 0.35
NUB1-201ENST00000413040 ANKRD26Q9UPS8 1709 aa17.21■□□□□ 0.35
NUB1-201ENST00000413040 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
NUB1-201ENST00000413040 ABCC4O15439 1325 aa17.2■□□□□ 0.34
NUB1-201ENST00000413040 FOXO3O43524 673 aa17.2■□□□□ 0.34
NUB1-201ENST00000413040 NUTM2GQ5VZR2 741 aa17.2■□□□□ 0.34
NUB1-201ENST00000413040 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
NUB1-201ENST00000413040 TRAK2O60296 914 aa17.2■□□□□ 0.34
NUB1-201ENST00000413040 RTF1Q92541 710 aaKnown RBP17.2■□□□□ 0.34
NUB1-201ENST00000413040 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
NUB1-201ENST00000413040 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
NUB1-201ENST00000413040 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
NUB1-201ENST00000413040 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
NUB1-201ENST00000413040 ROBO2Q9HCK4 1378 aa17.18■□□□□ 0.34
NUB1-201ENST00000413040 RBM25P49756 843 aaKnown RBP17.18■□□□□ 0.34
NUB1-201ENST00000413040 AMPHP49418 695 aa17.18■□□□□ 0.34
NUB1-201ENST00000413040 C14orf37Q86TY3 774 aa17.18■□□□□ 0.34
NUB1-201ENST00000413040 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
NUB1-201ENST00000413040 GOLGA6L3A6NEY3 463 aa17.18■□□□□ 0.34
NUB1-201ENST00000413040 F6X3S4 739 aa17.18■□□□□ 0.34
NUB1-201ENST00000413040 LTKP29376 864 aa17.18■□□□□ 0.34
NUB1-201ENST00000413040 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
NUB1-201ENST00000413040 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
NUB1-201ENST00000413040 TNRQ92752 1358 aa17.17■□□□□ 0.34
NUB1-201ENST00000413040 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
NUB1-201ENST00000413040 CD2BP2O95400 341 aaKnown RBP17.17■□□□□ 0.34
NUB1-201ENST00000413040 L1TD1Q5T7N2 865 aaKnown RBP17.17■□□□□ 0.34
NUB1-201ENST00000413040 MEIS3Q99687 375 aa17.17■□□□□ 0.34
NUB1-201ENST00000413040 CDC45O75419 566 aa17.17■□□□□ 0.34
NUB1-201ENST00000413040 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
NUB1-201ENST00000413040 PTCH1Q13635 1447 aa17.16■□□□□ 0.34
NUB1-201ENST00000413040 DLC1Q96QB1 1528 aa17.16■□□□□ 0.34
NUB1-201ENST00000413040 GSPT1P15170 499 aaKnown RBP17.15■□□□□ 0.34
NUB1-201ENST00000413040 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
NUB1-201ENST00000413040 PLEKHM2Q8IWE5 1019 aa17.15■□□□□ 0.34
NUB1-201ENST00000413040 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
NUB1-201ENST00000413040 CHL1O00533 1208 aa17.14■□□□□ 0.33
NUB1-201ENST00000413040 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
NUB1-201ENST00000413040 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
NUB1-201ENST00000413040 AMOTL2Q9Y2J4 779 aa17.13■□□□□ 0.33
NUB1-201ENST00000413040 SPATA31D1Q6ZQQ2 1576 aa17.13■□□□□ 0.33
NUB1-201ENST00000413040 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
NUB1-201ENST00000413040 G2E3Q7L622 706 aa17.13■□□□□ 0.33
NUB1-201ENST00000413040 PANK2Q9BZ23 570 aa17.13■□□□□ 0.33
NUB1-201ENST00000413040 DIP2BQ9P265 1576 aa17.13■□□□□ 0.33
NUB1-201ENST00000413040 TMEM2Q9UHN6 1383 aa17.13■□□□□ 0.33
NUB1-201ENST00000413040 EIF5BO60841 1220 aaKnown RBP17.12■□□□□ 0.33
NUB1-201ENST00000413040 MTHFSDQ2M296 383 aaKnown RBP17.12■□□□□ 0.33
NUB1-201ENST00000413040 MAP3K19Q56UN5 1328 aa17.12■□□□□ 0.33
NUB1-201ENST00000413040 KIF2CQ99661 725 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms