RNA–Protein interactions for RNA: ENST00000412870.1

CASKP1-201, Transcript of calcium/calmodulin dependent serine protein kinase pseudogene 1, humanhuman

BASIC

Gene CASKP1, Length 582 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKP1-201ENST00000412870 SMPD1P17405 629 aa11.52□□□□□ -0.57
CASKP1-201ENST00000412870 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
CASKP1-201ENST00000412870 MMP16P51512 607 aa11.52□□□□□ -0.57
CASKP1-201ENST00000412870 ACIN1Q9UKV3 1341 aaKnown RBP11.52□□□□□ -0.57
CASKP1-201ENST00000412870 ZC3H4Q9UPT8 1303 aaKnown RBP11.52□□□□□ -0.57
CASKP1-201ENST00000412870 ZBTB7CA1YPR0 619 aa11.51□□□□□ -0.57
CASKP1-201ENST00000412870 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
CASKP1-201ENST00000412870 NUDT12Q9BQG2 462 aa11.51□□□□□ -0.57
CASKP1-201ENST00000412870 ATP13A2Q9NQ11 1180 aa11.51□□□□□ -0.57
CASKP1-201ENST00000412870 EVA1BQ9NVM1 165 aa11.51□□□□□ -0.57
CASKP1-201ENST00000412870 INSM1Q01101 510 aaPredicted RBP11.5□□□□□ -0.57
CASKP1-201ENST00000412870 MAFBQ9Y5Q3 323 aaPredicted RBP11.5□□□□□ -0.57
CASKP1-201ENST00000412870 KCNH2Q12809 1159 aa11.49□□□□□ -0.57
CASKP1-201ENST00000412870 PIK3CDO00329 1044 aa11.48□□□□□ -0.57
CASKP1-201ENST00000412870 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
CASKP1-201ENST00000412870 OCSTAMPQ9BR26 566 aa11.48□□□□□ -0.57
CASKP1-201ENST00000412870 J3QL48 77 aa11.47□□□□□ -0.57
CASKP1-201ENST00000412870 ATP9BO43861 1147 aa11.46□□□□□ -0.57
CASKP1-201ENST00000412870 CDCA8Q53HL2 280 aa11.46□□□□□ -0.57
CASKP1-201ENST00000412870 AEBP1Q8IUX7 1158 aa11.46□□□□□ -0.57
CASKP1-201ENST00000412870 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.57
CASKP1-201ENST00000412870 TRIM47Q96LD4 638 aa11.45□□□□□ -0.58
CASKP1-201ENST00000412870 WNT7AO00755 349 aa11.44□□□□□ -0.58
CASKP1-201ENST00000412870 PDXDC2PQ6P474 469 aa11.44□□□□□ -0.58
CASKP1-201ENST00000412870 MRGPRX2Q96LB1 330 aa11.44□□□□□ -0.58
CASKP1-201ENST00000412870 CARNS1A5YM72 827 aa11.43□□□□□ -0.58
CASKP1-201ENST00000412870 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
CASKP1-201ENST00000412870 ARMC2Q8NEN0 867 aa11.43□□□□□ -0.58
CASKP1-201ENST00000412870 SNIP1Q8TAD8 396 aaKnown RBP11.43□□□□□ -0.58
CASKP1-201ENST00000412870 HPS1Q92902 700 aa11.43□□□□□ -0.58
CASKP1-201ENST00000412870 GPKOWQ92917 476 aaPredicted RBP eCLIP11.43□□□□□ -0.58
CASKP1-201ENST00000412870 GPSM3Q9Y4H4 160 aa11.43□□□□□ -0.58
CASKP1-201ENST00000412870 ZBTB24O43167 697 aaPredicted RBP11.42□□□□□ -0.58
CASKP1-201ENST00000412870 ATG7O95352 703 aa11.42□□□□□ -0.58
CASKP1-201ENST00000412870 PTK2Q05397 1052 aa11.42□□□□□ -0.58
CASKP1-201ENST00000412870 FAM174AQ8TBP5 190 aa11.42□□□□□ -0.58
CASKP1-201ENST00000412870 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
CASKP1-201ENST00000412870 CSB-PGBD3P0DP91 1061 aa11.41□□□□□ -0.58
CASKP1-201ENST00000412870 TRIM32Q13049 653 aa11.41□□□□□ -0.58
CASKP1-201ENST00000412870 PDE4CQ08493 712 aa11.4□□□□□ -0.58
CASKP1-201ENST00000412870 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.58
CASKP1-201ENST00000412870 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
CASKP1-201ENST00000412870 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
CASKP1-201ENST00000412870 NFATC2IPQ8NCF5 419 aa11.4□□□□□ -0.58
CASKP1-201ENST00000412870 UNC93B1Q9H1C4 597 aa11.4□□□□□ -0.58
CASKP1-201ENST00000412870 SKIP12755 728 aa11.39□□□□□ -0.59
CASKP1-201ENST00000412870 CEP126Q9P2H0 1117 aa11.39□□□□□ -0.59
CASKP1-201ENST00000412870 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
CASKP1-201ENST00000412870 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
CASKP1-201ENST00000412870 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
CASKP1-201ENST00000412870 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
CASKP1-201ENST00000412870 PCDHB9Q9Y5E1 797 aa11.38□□□□□ -0.59
CASKP1-201ENST00000412870 USP17L5A8MUK1 530 aa11.37□□□□□ -0.59
CASKP1-201ENST00000412870 SH3BP5LQ7L8J4 393 aa11.37□□□□□ -0.59
CASKP1-201ENST00000412870 ADAM32Q8TC27 787 aa11.37□□□□□ -0.59
CASKP1-201ENST00000412870 ARHGAP9Q9BRR9 750 aa11.37□□□□□ -0.59
CASKP1-201ENST00000412870 VRTNQ9H8Y1 702 aa11.37□□□□□ -0.59
CASKP1-201ENST00000412870 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
CASKP1-201ENST00000412870 LORP23490 312 aaPredicted RBP11.36□□□□□ -0.59
CASKP1-201ENST00000412870 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
CASKP1-201ENST00000412870 PHTF2Q8N3S3 785 aa11.36□□□□□ -0.59
CASKP1-201ENST00000412870 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
CASKP1-201ENST00000412870 DEPDC4Q8N2C3 294 aa11.35□□□□□ -0.59
CASKP1-201ENST00000412870 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
CASKP1-201ENST00000412870 SLFNL1Q499Z3 407 aa11.33□□□□□ -0.6
CASKP1-201ENST00000412870 ZMIZ1Q9ULJ6 1067 aa11.33□□□□□ -0.6
CASKP1-201ENST00000412870 LOC100996750A0A140TA64 210 aa11.32□□□□□ -0.6
CASKP1-201ENST00000412870 BRD1O95696 1058 aa11.32□□□□□ -0.6
CASKP1-201ENST00000412870 SKOR1P84550 965 aa11.32□□□□□ -0.6
CASKP1-201ENST00000412870 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
CASKP1-201ENST00000412870 RNF135Q8IUD6 432 aa11.32□□□□□ -0.6
CASKP1-201ENST00000412870 BAP1Q92560 729 aa11.32□□□□□ -0.6
CASKP1-201ENST00000412870 KRTAP4-6Q9BYQ5 205 aa11.32□□□□□ -0.6
CASKP1-201ENST00000412870 GMPRP36959 345 aa11.31□□□□□ -0.6
CASKP1-201ENST00000412870 NCOA4Q13772 614 aa11.31□□□□□ -0.6
CASKP1-201ENST00000412870 LINC01559Q495D7 138 aa11.31□□□□□ -0.6
CASKP1-201ENST00000412870 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
CASKP1-201ENST00000412870 PLPP7Q8NBV4 271 aa11.31□□□□□ -0.6
CASKP1-201ENST00000412870 ZNF592Q92610 1267 aa11.31□□□□□ -0.6
CASKP1-201ENST00000412870 CARD14Q9BXL6 1004 aa11.31□□□□□ -0.6
CASKP1-201ENST00000412870 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
CASKP1-201ENST00000412870 CCDC9Q9Y3X0 531 aaKnown RBP11.31□□□□□ -0.6
CASKP1-201ENST00000412870 ELOAQ14241 798 aaKnown RBP11.3□□□□□ -0.6
CASKP1-201ENST00000412870 STK32AQ8WU08 396 aa11.3□□□□□ -0.6
CASKP1-201ENST00000412870 MAGEB6P1A0A0J9YX57 407 aa11.29□□□□□ -0.6
CASKP1-201ENST00000412870 VEGFBP49765 207 aa11.29□□□□□ -0.6
CASKP1-201ENST00000412870 TSGA10IPQ3SY00 556 aa11.29□□□□□ -0.6
CASKP1-201ENST00000412870 C4orf48Q5BLP8 95 aa11.29□□□□□ -0.6
CASKP1-201ENST00000412870 FOXJ1Q92949 421 aa11.29□□□□□ -0.6
CASKP1-201ENST00000412870 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
CASKP1-201ENST00000412870 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
CASKP1-201ENST00000412870 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
CASKP1-201ENST00000412870 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
CASKP1-201ENST00000412870 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
CASKP1-201ENST00000412870 TMEM164Q5U3C3 297 aa11.28□□□□□ -0.6
CASKP1-201ENST00000412870 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
CASKP1-201ENST00000412870 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
CASKP1-201ENST00000412870 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L10C9JJH3 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms