RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 USP19O94966 1318 aa23.83■■□□□ 1.4
CXXC1-202ENST00000412036 GCP02774 474 aa23.82■■□□□ 1.4
CXXC1-202ENST00000412036 CABLES1Q8TDN4 633 aa23.82■■□□□ 1.4
CXXC1-202ENST00000412036 FCHSD2O94868 740 aa23.81■■□□□ 1.4
CXXC1-202ENST00000412036 AMPHP49418 695 aa23.81■■□□□ 1.4
CXXC1-202ENST00000412036 IRX6P78412 446 aaPredicted RBP23.81■■□□□ 1.4
CXXC1-202ENST00000412036 DUSP27Q5VZP5 1158 aa23.81■■□□□ 1.4
CXXC1-202ENST00000412036 NPHP3Q7Z494 1330 aa23.81■■□□□ 1.4
CXXC1-202ENST00000412036 TMPOP42166 694 aaKnown RBP23.8■■□□□ 1.4
CXXC1-202ENST00000412036 TRIM35Q9UPQ4 493 aa23.8■■□□□ 1.4
CXXC1-202ENST00000412036 PDE3BQ13370 1112 aa23.8■■□□□ 1.4
CXXC1-202ENST00000412036 SULT6B1Q6IMI4 303 aa23.79■■□□□ 1.4
CXXC1-202ENST00000412036 SLFN5Q08AF3 891 aa23.79■■□□□ 1.4
CXXC1-202ENST00000412036 ZBTB7CA1YPR0 619 aa23.78■■□□□ 1.4
CXXC1-202ENST00000412036 GOLGA2Q08379 1002 aa23.78■■□□□ 1.4
CXXC1-202ENST00000412036 TRMT2AQ8IZ69 625 aaKnown RBP23.78■■□□□ 1.4
CXXC1-202ENST00000412036 LTV1Q96GA3 475 aaPredicted RBP23.77■■□□□ 1.4
CXXC1-202ENST00000412036 EYA1Q99502 592 aa23.77■■□□□ 1.4
CXXC1-202ENST00000412036 TNS3Q68CZ2 1445 aa23.77■■□□□ 1.4
CXXC1-202ENST00000412036 SPATA31A3Q5VYP0 1347 aa23.77■■□□□ 1.4
CXXC1-202ENST00000412036 CRYBG1Q9Y4K1 1723 aa23.76■■□□□ 1.39
CXXC1-202ENST00000412036 ARHGEF25Q86VW2 580 aa23.76■■□□□ 1.39
CXXC1-202ENST00000412036 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
CXXC1-202ENST00000412036 FKBP8Q14318 412 aa23.75■■□□□ 1.39
CXXC1-202ENST00000412036 PELP1Q8IZL8 1130 aaKnown RBP23.75■■□□□ 1.39
CXXC1-202ENST00000412036 SOS2Q07890 1332 aaPredicted RBP23.75■■□□□ 1.39
CXXC1-202ENST00000412036 PHRF1Q9P1Y6 1649 aaKnown RBP23.74■■□□□ 1.39
CXXC1-202ENST00000412036 RGPD2P0DJD1 1756 aa23.74■■□□□ 1.39
CXXC1-202ENST00000412036 ZC3H6P61129 1189 aaKnown RBP23.73■■□□□ 1.39
CXXC1-202ENST00000412036 IP6K1Q92551 441 aa23.73■■□□□ 1.39
CXXC1-202ENST00000412036 MAPK8IP3Q9UPT6 1336 aa23.73■■□□□ 1.39
CXXC1-202ENST00000412036 RIPK4P57078 832 aa23.72■■□□□ 1.39
CXXC1-202ENST00000412036 CCDC27Q2M243 656 aa23.72■■□□□ 1.39
CXXC1-202ENST00000412036 IGSF1Q8N6C5 1336 aa23.72■■□□□ 1.39
CXXC1-202ENST00000412036 USHBP1Q8N6Y0 703 aa23.72■■□□□ 1.39
CXXC1-202ENST00000412036 KCNH5Q8NCM2 988 aa23.72■■□□□ 1.39
CXXC1-202ENST00000412036 RGPD5Q99666 1765 aa23.72■■□□□ 1.39
CXXC1-202ENST00000412036 DLG5Q8TDM6 1919 aa23.72■■□□□ 1.39
CXXC1-202ENST00000412036 NHSL1Q5SYE7 1610 aa23.71■■□□□ 1.39
CXXC1-202ENST00000412036 THUMPD2Q9BTF0 503 aaKnown RBP23.71■■□□□ 1.39
CXXC1-202ENST00000412036 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
CXXC1-202ENST00000412036 RTL1A6NKG5 1358 aa23.7■■□□□ 1.38
CXXC1-202ENST00000412036 ARHGEF10O15013 1369 aa23.7■■□□□ 1.38
CXXC1-202ENST00000412036 RNF123Q5XPI4 1314 aa23.7■■□□□ 1.38
CXXC1-202ENST00000412036 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
CXXC1-202ENST00000412036 KDRP35968 1356 aa23.69■■□□□ 1.38
CXXC1-202ENST00000412036 ROBO1Q9Y6N7 1651 aa23.69■■□□□ 1.38
CXXC1-202ENST00000412036 FAM83GA6ND36 823 aa23.68■■□□□ 1.38
CXXC1-202ENST00000412036 NBPF6Q5VWK0 638 aa23.68■■□□□ 1.38
CXXC1-202ENST00000412036 NBPF4Q96M43 638 aa23.68■■□□□ 1.38
CXXC1-202ENST00000412036 NFE2L2Q16236 605 aa23.68■■□□□ 1.38
CXXC1-202ENST00000412036 NGEFQ8N5V2 710 aa23.67■■□□□ 1.38
CXXC1-202ENST00000412036 RCAN3Q9UKA8 241 aa23.67■■□□□ 1.38
CXXC1-202ENST00000412036 COL18A1P39060 1754 aa23.66■■□□□ 1.38
CXXC1-202ENST00000412036 E9PSI1 815 aa23.66■■□□□ 1.38
CXXC1-202ENST00000412036 DCTN1Q14203 1278 aa23.66■■□□□ 1.38
CXXC1-202ENST00000412036 CHRNA2Q15822 529 aa23.65■■□□□ 1.38
CXXC1-202ENST00000412036 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
CXXC1-202ENST00000412036 TSR2Q969E8 191 aaKnown RBP23.65■■□□□ 1.38
CXXC1-202ENST00000412036 NCBP3Q53F19 620 aaKnown RBP23.64■■□□□ 1.37
CXXC1-202ENST00000412036 KIAA0232Q92628 1395 aa23.62■■□□□ 1.37
CXXC1-202ENST00000412036 MTHFSDQ2M296 383 aaKnown RBP23.62■■□□□ 1.37
CXXC1-202ENST00000412036 PNNQ9H307 717 aaKnown RBP23.62■■□□□ 1.37
CXXC1-202ENST00000412036 ABCA3Q99758 1704 aa23.62■■□□□ 1.37
CXXC1-202ENST00000412036 PLIN1O60240 522 aa23.61■■□□□ 1.37
CXXC1-202ENST00000412036 ANKRD24Q8TF21 1146 aa23.61■■□□□ 1.37
CXXC1-202ENST00000412036 FANCIQ9NVI1 1328 aa23.59■■□□□ 1.37
CXXC1-202ENST00000412036 ERBB3P21860 1342 aa23.58■■□□□ 1.36
CXXC1-202ENST00000412036 RRP1P56182 461 aaKnown RBP23.57■■□□□ 1.36
CXXC1-202ENST00000412036 MCM10Q7L590 875 aa23.57■■□□□ 1.36
CXXC1-202ENST00000412036 NCAPD2Q15021 1401 aa23.55■■□□□ 1.36
CXXC1-202ENST00000412036 BCAR3O75815 825 aa23.55■■□□□ 1.36
CXXC1-202ENST00000412036 NEFLP07196 543 aa23.55■■□□□ 1.36
CXXC1-202ENST00000412036 LMO7Q8WWI1 1683 aa23.54■■□□□ 1.36
CXXC1-202ENST00000412036 CAMTA1Q9Y6Y1 1673 aa23.54■■□□□ 1.36
CXXC1-202ENST00000412036 NEFMP07197 916 aa23.54■■□□□ 1.36
CXXC1-202ENST00000412036 AHDC1Q5TGY3 1603 aaPredicted RBP23.54■■□□□ 1.36
CXXC1-202ENST00000412036 CPDO75976 1380 aa23.54■■□□□ 1.36
CXXC1-202ENST00000412036 PIP4K2BP78356 416 aa23.53■■□□□ 1.36
CXXC1-202ENST00000412036 C20orf194Q5TEA3 1177 aa23.53■■□□□ 1.36
CXXC1-202ENST00000412036 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
CXXC1-202ENST00000412036 LAS1LQ9Y4W2 734 aaKnown RBP23.52■■□□□ 1.36
CXXC1-202ENST00000412036 EXOSC9Q06265 439 aaKnown RBP23.51■■□□□ 1.35
CXXC1-202ENST00000412036 IL16Q14005 1332 aa23.51■■□□□ 1.35
CXXC1-202ENST00000412036 FAM208AQ9UK61 1670 aaKnown RBP23.51■■□□□ 1.35
CXXC1-202ENST00000412036 ZNF853P0CG23 659 aa23.5■■□□□ 1.35
CXXC1-202ENST00000412036 COL16A1Q07092 1604 aaPredicted RBP23.49■■□□□ 1.35
CXXC1-202ENST00000412036 MYH16Q9H6N6 1097 aa23.48■■□□□ 1.35
CXXC1-202ENST00000412036 MBIPQ9NS73 344 aa23.48■■□□□ 1.35
CXXC1-202ENST00000412036 CRB1P82279 1406 aa23.48■■□□□ 1.35
CXXC1-202ENST00000412036 BCL2L13Q9BXK5 485 aa23.48■■□□□ 1.35
CXXC1-202ENST00000412036 PRDM11Q9NQV5 511 aa23.47■■□□□ 1.35
CXXC1-202ENST00000412036 TSPYL6Q8N831 410 aa23.46■■□□□ 1.35
CXXC1-202ENST00000412036 MIS18AQ9NYP9 233 aa23.46■■□□□ 1.35
CXXC1-202ENST00000412036 RARSP54136 660 aaKnown RBP23.45■■□□□ 1.35
CXXC1-202ENST00000412036 NLRP2Q9NX02 1062 aa23.45■■□□□ 1.35
CXXC1-202ENST00000412036 PHLPP1O60346 1717 aa23.45■■□□□ 1.35
CXXC1-202ENST00000412036 KRT24Q2M2I5 525 aa23.45■■□□□ 1.34
CXXC1-202ENST00000412036 IL17REQ8NFR9 667 aa23.45■■□□□ 1.34
CXXC1-202ENST00000412036 MEGF6O75095 1541 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms