RNA–Protein interactions for RNA: ENST00000410611.1

RN7SKP220-201, Transcript of RNA, 7SK small nuclear pseudogene 220, humanhuman

BASIC

Gene RN7SKP220, Length 288 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP220-201ENST00000410611 LRP6O75581 1613 aa4.3□□□□□ -1.72
RN7SKP220-201ENST00000410611 USP32Q8NFA0 1604 aa4.3□□□□□ -1.72
RN7SKP220-201ENST00000410611 MED1Q15648 1581 aaPredicted RBP4.3□□□□□ -1.72
RN7SKP220-201ENST00000410611 TNS3Q68CZ2 1445 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 PPIP5K1Q6PFW1 1433 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 CPDO75976 1380 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 USP31Q70CQ4 1352 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 USP47Q96K76 1375 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 NINLQ9Y2I6 1382 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 COL22A1Q8NFW1 1626 aaPredicted RBP4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 AFF2P51816 1311 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 TTC21AQ8NDW8 1320 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 PAK3O75914 559 aaPredicted RBP4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 TMF1P82094 1093 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 PDE4CQ08493 712 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 VPS72Q15906 364 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 MEX3CQ5U5Q3 659 aaKnown RBP4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 ARHGEF25Q86VW2 580 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 GJD4Q96KN9 370 aaPredicted RBP4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 C8orf37Q96NL8 207 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 DCBLD2Q96PD2 775 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 CARD14Q9BXL6 1004 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 USP21Q9UK80 565 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 TRPC5Q9UL62 973 aaPredicted RBP4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 SLIT2O94813 1529 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 ARHGEF28Q8N1W1 1705 aaKnown RBP4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 USP6P35125 1406 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 KIF1AQ12756 1690 aa4.29□□□□□ -1.72
RN7SKP220-201ENST00000410611 C11orf95C9JLR9 678 aaPredicted RBP4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 FYB1O15117 783 aa4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 HSPA5P11021 654 aaKnown RBP4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 NLRP6P59044 892 aa4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 LMOD2Q6P5Q4 547 aa4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 HDGFL2Q7Z4V5 671 aaPredicted RBP4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 IFNLR1Q8IU57 520 aaPredicted RBP4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 KCNH5Q8NCM2 988 aa4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 BCCIPQ9P287 314 aaKnown RBP eCLIP4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 CD163L1Q9NR16 1453 aa4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 CDK12Q9NYV4 1490 aaPredicted RBP4.28□□□□□ -1.72
RN7SKP220-201ENST00000410611 AATKQ6ZMQ8 1374 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 KTN1Q86UP2 1357 aaKnown RBP4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 NEFLP07196 543 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 CLCN6P51797 869 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 DHX37Q8IY37 1157 aaKnown RBP4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 KCTD17Q8N5Z5 321 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 TMC1Q8TDI8 760 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 OTUD5Q96G74 571 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 CLEC11AQ9Y240 323 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 AXIN2Q9Y2T1 843 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 ATRNO75882 1429 aa4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 RGPD8O14715 1765 aaPredicted RBP4.27□□□□□ -1.73
RN7SKP220-201ENST00000410611 SPATA31A5Q5VU36 1347 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 SPATA31A7Q8IWB4 1347 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 PER1O15534 1290 aaPredicted RBP4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 ZC3H6P61129 1189 aaKnown RBP4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 NUTM2GQ5VZR2 741 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 BARGINQ6ZT62 677 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 CCDC125Q86Z20 511 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 RGS22Q8NE09 1264 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 ARID3AQ99856 593 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 C1orf115Q9H7X2 142 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 PRDM11Q9NQV5 511 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 BTG4Q9NY30 223 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 THRAP3Q9Y2W1 955 aaKnown RBP4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 EDC4Q6P2E9 1401 aaKnown RBP4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 TRPM3Q9HCF6 1732 aaPredicted RBP4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 ANKRD36BQ8N2N9 1353 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 KIAA0232Q92628 1395 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 ALS2Q96Q42 1657 aa4.26□□□□□ -1.73
RN7SKP220-201ENST00000410611 SPATA31A1Q5TZJ5 1347 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 RAD21O60216 631 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 NME9Q86XW9 330 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 SEPT12Q8IYM1 358 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 IP6K1Q92551 441 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 CARD10Q9BWT7 1032 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 ZRANB1Q9UGI0 708 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 TOPAZ1Q8N9V7 1692 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 A0A1W2PP64 1363 aa4.25□□□□□ -1.73
RN7SKP220-201ENST00000410611 EVA1CP58658 441 aa4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 CHRNA2Q15822 529 aa4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 TCP11L2Q8N4U5 519 aa4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 SPDYE1Q8NFV5 336 aaPredicted RBP4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 UPF1Q92900 1129 aaKnown RBP eCLIP4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 COG3Q96JB2 828 aa4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 PANK3Q9H999 370 aa4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 QRICH2Q9H0J4 1663 aa4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 KIF24Q5T7B8 1368 aa4.24□□□□□ -1.73
RN7SKP220-201ENST00000410611 CGNL1Q0VF96 1302 aa4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 WASHC2AQ641Q2 1341 aa4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 WDR17Q8IZU2 1322 aa4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 CAMTA1Q9Y6Y1 1673 aa4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 SLIT3O75094 1523 aa4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 ECM2O94769 699 aaPredicted RBP4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 MYCNP04198 464 aaPredicted RBP4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 NEUROD2Q15784 382 aa4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 LARP1Q6PKG0 1096 aaKnown RBP4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 CDCA7Q9BWT1 371 aaPredicted RBP4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 ITSN1Q15811 1721 aa4.23□□□□□ -1.73
RN7SKP220-201ENST00000410611 KIF7Q2M1P5 1343 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms