RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 DDB1Q16531 1140 aa24.52■■□□□ 1.52
SCRN1-203ENST00000409570 CABP1Q9NZU7 370 aa24.52■■□□□ 1.52
SCRN1-203ENST00000409570 PTF1AQ7RTS3 328 aa24.5■■□□□ 1.51
SCRN1-203ENST00000409570 ANO8Q9HCE9 1232 aaPredicted RBP24.5■■□□□ 1.51
SCRN1-203ENST00000409570 TOM1L2Q6ZVM7 507 aa24.49■■□□□ 1.51
SCRN1-203ENST00000409570 BCL11BQ9C0K0 894 aaPredicted RBP24.48■■□□□ 1.51
SCRN1-203ENST00000409570 AXIN2Q9Y2T1 843 aa24.48■■□□□ 1.51
SCRN1-203ENST00000409570 WDR17Q8IZU2 1322 aa24.47■■□□□ 1.51
SCRN1-203ENST00000409570 MARCH10Q8NA82 808 aaPredicted RBP24.46■■□□□ 1.51
SCRN1-203ENST00000409570 BCL9O00512 1426 aa24.45■■□□□ 1.51
SCRN1-203ENST00000409570 CPSF1Q10570 1443 aaKnown RBP24.45■■□□□ 1.51
SCRN1-203ENST00000409570 PROM2Q8N271 834 aa24.45■■□□□ 1.5
SCRN1-203ENST00000409570 TRPM1Q7Z4N2 1603 aa24.44■■□□□ 1.5
SCRN1-203ENST00000409570 PDGFDQ9GZP0 370 aaPredicted RBP24.44■■□□□ 1.5
SCRN1-203ENST00000409570 MYOM1P52179 1685 aa24.43■■□□□ 1.5
SCRN1-203ENST00000409570 DCAF8L1A6NGE4 600 aa24.43■■□□□ 1.5
SCRN1-203ENST00000409570 ARHGEF25Q86VW2 580 aa24.42■■□□□ 1.5
SCRN1-203ENST00000409570 CDCA7Q9BWT1 371 aaPredicted RBP24.42■■□□□ 1.5
SCRN1-203ENST00000409570 TTC21BQ7Z4L5 1316 aa24.39■■□□□ 1.5
SCRN1-203ENST00000409570 EVC2Q86UK5 1308 aa24.39■■□□□ 1.5
SCRN1-203ENST00000409570 CARD10Q9BWT7 1032 aa24.39■■□□□ 1.49
SCRN1-203ENST00000409570 ZBTB7AO95365 584 aa24.38■■□□□ 1.49
SCRN1-203ENST00000409570 NFAT5O94916 1531 aa24.38■■□□□ 1.49
SCRN1-203ENST00000409570 PTGER2P43116 358 aa24.37■■□□□ 1.49
SCRN1-203ENST00000409570 KCNH5Q8NCM2 988 aa24.37■■□□□ 1.49
SCRN1-203ENST00000409570 KAT6BQ8WYB5 2073 aa24.36■■□□□ 1.49
SCRN1-203ENST00000409570 TXNRD1Q16881 649 aa24.36■■□□□ 1.49
SCRN1-203ENST00000409570 ZNF692Q9BU19 519 aaPredicted RBP24.36■■□□□ 1.49
SCRN1-203ENST00000409570 NHSQ6T4R5 1651 aa24.35■■□□□ 1.49
SCRN1-203ENST00000409570 SOX12O15370 315 aa24.35■■□□□ 1.49
SCRN1-203ENST00000409570 CSB-PGBD3P0DP91 1061 aa24.35■■□□□ 1.49
SCRN1-203ENST00000409570 L3MBTL2Q969R5 705 aa24.34■■□□□ 1.49
SCRN1-203ENST00000409570 ATF5Q9Y2D1 282 aaPredicted RBP24.34■■□□□ 1.49
SCRN1-203ENST00000409570 MON2Q7Z3U7 1717 aa24.34■■□□□ 1.49
SCRN1-203ENST00000409570 UTRNP46939 3433 aa24.34■■□□□ 1.49
SCRN1-203ENST00000409570 TTC21AQ8NDW8 1320 aa24.34■■□□□ 1.49
SCRN1-203ENST00000409570 CHD4Q14839 1912 aa24.33■■□□□ 1.49
SCRN1-203ENST00000409570 EXOC5O00471 708 aa24.33■■□□□ 1.49
SCRN1-203ENST00000409570 STK32BQ9NY57 414 aa24.33■■□□□ 1.49
SCRN1-203ENST00000409570 ABCC6O95255 1503 aa24.33■■□□□ 1.49
SCRN1-203ENST00000409570 CCDC7Q96M83 1385 aa24.32■■□□□ 1.48
SCRN1-203ENST00000409570 SLC15A2Q16348 729 aa24.32■■□□□ 1.48
SCRN1-203ENST00000409570 TNS2Q63HR2 1409 aa24.32■■□□□ 1.48
SCRN1-203ENST00000409570 USP54Q70EL1 1684 aa24.3■■□□□ 1.48
SCRN1-203ENST00000409570 LTN1O94822 1766 aa24.3■■□□□ 1.48
SCRN1-203ENST00000409570 BTAF1O14981 1849 aa24.28■■□□□ 1.48
SCRN1-203ENST00000409570 PAPPAQ13219 1627 aa24.28■■□□□ 1.48
SCRN1-203ENST00000409570 KTN1Q86UP2 1357 aaKnown RBP24.28■■□□□ 1.48
SCRN1-203ENST00000409570 SGIP1Q9BQI5 828 aa24.27■■□□□ 1.48
SCRN1-203ENST00000409570 SYT17Q9BSW7 474 aa24.26■■□□□ 1.47
SCRN1-203ENST00000409570 FHDC1Q9C0D6 1143 aaPredicted RBP24.26■■□□□ 1.47
SCRN1-203ENST00000409570 MTFR1LQ9H019 292 aa24.26■■□□□ 1.47
SCRN1-203ENST00000409570 ROCK2O75116 1388 aaKnown RBP24.25■■□□□ 1.47
SCRN1-203ENST00000409570 ACSBG1Q96GR2 724 aa24.24■■□□□ 1.47
SCRN1-203ENST00000409570 ZNF784Q8NCA9 323 aaPredicted RBP24.23■■□□□ 1.47
SCRN1-203ENST00000409570 USP31Q70CQ4 1352 aa24.23■■□□□ 1.47
SCRN1-203ENST00000409570 ERBB3P21860 1342 aa24.22■■□□□ 1.47
SCRN1-203ENST00000409570 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
SCRN1-203ENST00000409570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.2■■□□□ 1.46
SCRN1-203ENST00000409570 NLRP2Q9NX02 1062 aa24.2■■□□□ 1.46
SCRN1-203ENST00000409570 CD163L1Q9NR16 1453 aa24.19■■□□□ 1.46
SCRN1-203ENST00000409570 IL2RBP14784 551 aa24.18■■□□□ 1.46
SCRN1-203ENST00000409570 NME9Q86XW9 330 aa24.18■■□□□ 1.46
SCRN1-203ENST00000409570 QSER1Q2KHR3 1735 aa24.18■■□□□ 1.46
SCRN1-203ENST00000409570 SBNO2Q9Y2G9 1366 aa24.17■■□□□ 1.46
SCRN1-203ENST00000409570 ZNF827Q17R98 1081 aa24.16■■□□□ 1.46
SCRN1-203ENST00000409570 ARXQ96QS3 562 aa24.16■■□□□ 1.46
SCRN1-203ENST00000409570 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
SCRN1-203ENST00000409570 COL24A1Q17RW2 1714 aa24.15■■□□□ 1.46
SCRN1-203ENST00000409570 TUBGCP6Q96RT7 1819 aa24.14■■□□□ 1.46
SCRN1-203ENST00000409570 ANKRD24Q8TF21 1146 aa24.14■■□□□ 1.45
SCRN1-203ENST00000409570 LRRC4BQ9NT99 713 aa24.14■■□□□ 1.45
SCRN1-203ENST00000409570 NEUROD1Q13562 356 aa24.13■■□□□ 1.45
SCRN1-203ENST00000409570 FAM208AQ9UK61 1670 aaKnown RBP24.11■■□□□ 1.45
SCRN1-203ENST00000409570 EDC4Q6P2E9 1401 aaKnown RBP24.1■■□□□ 1.45
SCRN1-203ENST00000409570 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
SCRN1-203ENST00000409570 AKT1S1Q96B36 256 aa24.09■■□□□ 1.45
SCRN1-203ENST00000409570 SLC12A5Q9H2X9 1139 aa24.09■■□□□ 1.45
SCRN1-203ENST00000409570 HDGFL2Q7Z4V5 671 aaPredicted RBP24.08■■□□□ 1.45
SCRN1-203ENST00000409570 RGPD2P0DJD1 1756 aa24.08■■□□□ 1.44
SCRN1-203ENST00000409570 LY75O60449 1722 aa24.07■■□□□ 1.44
SCRN1-203ENST00000409570 DOT1LQ8TEK3 1739 aa24.07■■□□□ 1.44
SCRN1-203ENST00000409570 SHANK3Q9BYB0 1731 aa24.06■■□□□ 1.44
SCRN1-203ENST00000409570 GOLGB1Q14789 3259 aaKnown RBP24.06■■□□□ 1.44
SCRN1-203ENST00000409570 A0A1W2PP64 1363 aa24.05■■□□□ 1.44
SCRN1-203ENST00000409570 SLC27A3Q5K4L6 730 aa24.05■■□□□ 1.44
SCRN1-203ENST00000409570 SLC16A10Q8TF71 515 aa24.05■■□□□ 1.44
SCRN1-203ENST00000409570 DDX54Q8TDD1 881 aaKnown RBP24.04■■□□□ 1.44
SCRN1-203ENST00000409570 IP6K1Q92551 441 aa24.04■■□□□ 1.44
SCRN1-203ENST00000409570 PNPLA7Q6ZV29 1317 aa24.04■■□□□ 1.44
SCRN1-203ENST00000409570 C1QTNF8P60827 252 aa24.03■■□□□ 1.44
SCRN1-203ENST00000409570 CARD11Q9BXL7 1154 aa24.03■■□□□ 1.44
SCRN1-203ENST00000409570 GPR162Q16538 588 aa24.02■■□□□ 1.44
SCRN1-203ENST00000409570 SENP3-EIF4A1A0A087X0R7 540 aa24.01■■□□□ 1.43
SCRN1-203ENST00000409570 LTV1Q96GA3 475 aaPredicted RBP24.01■■□□□ 1.43
SCRN1-203ENST00000409570 TERF2IPQ9NYB0 399 aa24.01■■□□□ 1.43
SCRN1-203ENST00000409570 POLD1P28340 1107 aa24■■□□□ 1.43
SCRN1-203ENST00000409570 KCNQ4P56696 695 aa24■■□□□ 1.43
SCRN1-203ENST00000409570 KLHL34Q8N239 644 aa23.99■■□□□ 1.43
SCRN1-203ENST00000409570 NSD2O96028 1365 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 959.8 ms