RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 STK31Q9BXU1 1019 aa15.77■□□□□ 0.11
ATG9A-203ENST00000409033 TRMT2AQ8IZ69 625 aaKnown RBP15.77■□□□□ 0.11
ATG9A-203ENST00000409033 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
ATG9A-203ENST00000409033 RICTORQ6R327 1708 aa15.76■□□□□ 0.11
ATG9A-203ENST00000409033 ZC3H6P61129 1189 aaKnown RBP15.75■□□□□ 0.11
ATG9A-203ENST00000409033 PLEKHF1Q96S99 279 aa15.75■□□□□ 0.11
ATG9A-203ENST00000409033 PTPRMP28827 1452 aa15.75■□□□□ 0.11
ATG9A-203ENST00000409033 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
ATG9A-203ENST00000409033 IL13P35225 146 aa15.75■□□□□ 0.11
ATG9A-203ENST00000409033 BECN1Q14457 450 aa15.75■□□□□ 0.11
ATG9A-203ENST00000409033 FKBP5Q13451 457 aaPredicted RBP15.75■□□□□ 0.11
ATG9A-203ENST00000409033 MYOM1P52179 1685 aa15.74■□□□□ 0.11
ATG9A-203ENST00000409033 PREX1Q8TCU6 1659 aa15.74■□□□□ 0.11
ATG9A-203ENST00000409033 F6X3S4 739 aa15.74■□□□□ 0.11
ATG9A-203ENST00000409033 MAP3K19Q56UN5 1328 aa15.74■□□□□ 0.11
ATG9A-203ENST00000409033 SETBP1Q9Y6X0 1596 aa15.74■□□□□ 0.11
ATG9A-203ENST00000409033 INSRP06213 1382 aa15.73■□□□□ 0.11
ATG9A-203ENST00000409033 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
ATG9A-203ENST00000409033 PHF8Q9UPP1 1060 aa15.73■□□□□ 0.11
ATG9A-203ENST00000409033 SEC24BO95487 1268 aa15.72■□□□□ 0.11
ATG9A-203ENST00000409033 KDM2BQ8NHM5 1336 aa15.72■□□□□ 0.11
ATG9A-203ENST00000409033 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.11
ATG9A-203ENST00000409033 ZFYVE9O95405 1425 aa15.7■□□□□ 0.1
ATG9A-203ENST00000409033 EDC4Q6P2E9 1401 aaKnown RBP15.7■□□□□ 0.1
ATG9A-203ENST00000409033 TEFQ10587 303 aa15.7■□□□□ 0.1
ATG9A-203ENST00000409033 C8orf34Q49A92 452 aa15.7■□□□□ 0.1
ATG9A-203ENST00000409033 API5Q9BZZ5 524 aaKnown RBP15.69■□□□□ 0.1
ATG9A-203ENST00000409033 HSPA2P54652 639 aa15.69■□□□□ 0.1
ATG9A-203ENST00000409033 MTHFSDQ2M296 383 aaKnown RBP15.69■□□□□ 0.1
ATG9A-203ENST00000409033 NLRP2Q9NX02 1062 aa15.69■□□□□ 0.1
ATG9A-203ENST00000409033 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
ATG9A-203ENST00000409033 TMEM131LA2VDJ0 1609 aa15.69■□□□□ 0.1
ATG9A-203ENST00000409033 ZC3H13Q5T200 1668 aaKnown RBP15.68■□□□□ 0.1
ATG9A-203ENST00000409033 VAMP4O75379 141 aa15.68■□□□□ 0.1
ATG9A-203ENST00000409033 DDX17Q92841 729 aaKnown RBP15.68■□□□□ 0.1
ATG9A-203ENST00000409033 LRRC59Q96AG4 307 aaKnown RBP15.68■□□□□ 0.1
ATG9A-203ENST00000409033 CFAP44Q96MT7 982 aa15.68■□□□□ 0.1
ATG9A-203ENST00000409033 ORAI2Q96SN7 254 aa15.68■□□□□ 0.1
ATG9A-203ENST00000409033 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
ATG9A-203ENST00000409033 EYA1Q99502 592 aa15.68■□□□□ 0.1
ATG9A-203ENST00000409033 ANXA1P04083 346 aa15.67■□□□□ 0.1
ATG9A-203ENST00000409033 OS9Q13438 667 aaPredicted RBP15.67■□□□□ 0.1
ATG9A-203ENST00000409033 TPRNQ4KMQ1 711 aa15.67■□□□□ 0.1
ATG9A-203ENST00000409033 TBX22Q9Y458 520 aa15.67■□□□□ 0.1
ATG9A-203ENST00000409033 SETD1BQ9UPS6 1966 aaKnown RBP15.66■□□□□ 0.1
ATG9A-203ENST00000409033 CHMP4BQ9H444 224 aaKnown RBP15.66■□□□□ 0.1
ATG9A-203ENST00000409033 ARHGEF28Q8N1W1 1705 aaKnown RBP15.66■□□□□ 0.1
ATG9A-203ENST00000409033 ARHGEF40Q8TER5 1519 aa15.66■□□□□ 0.1
ATG9A-203ENST00000409033 SMARCA5O60264 1052 aaPredicted RBP15.65■□□□□ 0.1
ATG9A-203ENST00000409033 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
ATG9A-203ENST00000409033 CT47B1P0C2W7 299 aaPredicted RBP15.65■□□□□ 0.1
ATG9A-203ENST00000409033 ATF3P18847 181 aa15.65■□□□□ 0.1
ATG9A-203ENST00000409033 MPRIPQ6WCQ1 1025 aa15.65■□□□□ 0.1
ATG9A-203ENST00000409033 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
ATG9A-203ENST00000409033 AIMP1Q12904 312 aaKnown RBP15.64■□□□□ 0.09
ATG9A-203ENST00000409033 ZNF530Q6P9A1 599 aaPredicted RBP15.64■□□□□ 0.09
ATG9A-203ENST00000409033 GAS2L2Q8NHY3 880 aa15.64■□□□□ 0.09
ATG9A-203ENST00000409033 HSP90AB1P08238 724 aaKnown RBP15.64■□□□□ 0.09
ATG9A-203ENST00000409033 C1orf141Q5JVX7 400 aa15.64■□□□□ 0.09
ATG9A-203ENST00000409033 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
ATG9A-203ENST00000409033 NOL8Q76FK4 1167 aaKnown RBP15.63■□□□□ 0.09
ATG9A-203ENST00000409033 MRPL50Q8N5N7 158 aaKnown RBP15.63■□□□□ 0.09
ATG9A-203ENST00000409033 GZF1Q9H116 711 aaPredicted RBP15.63■□□□□ 0.09
ATG9A-203ENST00000409033 HDGFL1Q5TGJ6 251 aa15.62■□□□□ 0.09
ATG9A-203ENST00000409033 IFT172Q9UG01 1749 aa15.62■□□□□ 0.09
ATG9A-203ENST00000409033 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
ATG9A-203ENST00000409033 CHD1LQ86WJ1 897 aa15.62■□□□□ 0.09
ATG9A-203ENST00000409033 HSCBQ8IWL3 235 aa15.62■□□□□ 0.09
ATG9A-203ENST00000409033 IL16Q14005 1332 aa15.62■□□□□ 0.09
ATG9A-203ENST00000409033 C22orf23Q9BZE7 217 aa15.61■□□□□ 0.09
ATG9A-203ENST00000409033 CHRNA2Q15822 529 aa15.61■□□□□ 0.09
ATG9A-203ENST00000409033 ALDH1L2Q3SY69 923 aa15.61■□□□□ 0.09
ATG9A-203ENST00000409033 GNAT3A8MTJ3 354 aa15.61■□□□□ 0.09
ATG9A-203ENST00000409033 G2E3Q7L622 706 aa15.61■□□□□ 0.09
ATG9A-203ENST00000409033 MEIS3Q99687 375 aa15.61■□□□□ 0.09
ATG9A-203ENST00000409033 EXOC6BQ9Y2D4 811 aa15.61■□□□□ 0.09
ATG9A-203ENST00000409033 TSHZ3Q63HK5 1081 aa15.6■□□□□ 0.09
ATG9A-203ENST00000409033 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
ATG9A-203ENST00000409033 CD163L1Q9NR16 1453 aa15.6■□□□□ 0.09
ATG9A-203ENST00000409033 CCDC9Q9Y3X0 531 aaKnown RBP15.6■□□□□ 0.09
ATG9A-203ENST00000409033 CPS1P31327 1500 aa15.6■□□□□ 0.09
ATG9A-203ENST00000409033 PLEKHG3A1L390 1219 aa15.6■□□□□ 0.09
ATG9A-203ENST00000409033 RILPL2Q969X0 211 aa15.59■□□□□ 0.09
ATG9A-203ENST00000409033 PLEKHG1Q9ULL1 1385 aa15.59■□□□□ 0.09
ATG9A-203ENST00000409033 FRAT2O75474 233 aaPredicted RBP15.59■□□□□ 0.09
ATG9A-203ENST00000409033 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
ATG9A-203ENST00000409033 HOXC9P31274 260 aa15.58■□□□□ 0.09
ATG9A-203ENST00000409033 NFKBIBQ15653 356 aa15.58■□□□□ 0.09
ATG9A-203ENST00000409033 ATP7BP35670 1465 aa15.58■□□□□ 0.09
ATG9A-203ENST00000409033 C16orf71Q8IYS4 520 aaPredicted RBP15.58■□□□□ 0.08
ATG9A-203ENST00000409033 FLT4P35916 1363 aa15.57■□□□□ 0.08
ATG9A-203ENST00000409033 NLRP1Q9C000 1473 aa15.57■□□□□ 0.08
ATG9A-203ENST00000409033 HMMRO75330 724 aa15.57■□□□□ 0.08
ATG9A-203ENST00000409033 RAPGEF4Q8WZA2 1011 aa15.57■□□□□ 0.08
ATG9A-203ENST00000409033 LRRC7Q96NW7 1537 aa15.56■□□□□ 0.08
ATG9A-203ENST00000409033 ADAMTS13Q76LX8 1427 aa15.56■□□□□ 0.08
ATG9A-203ENST00000409033 USP6P35125 1406 aa15.56■□□□□ 0.08
ATG9A-203ENST00000409033 TTC21AQ8NDW8 1320 aa15.56■□□□□ 0.08
ATG9A-203ENST00000409033 KRT28Q7Z3Y7 464 aa15.56■□□□□ 0.08
ATG9A-203ENST00000409033 AGLP35573 1532 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms