RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 BLMP54132 1417 aaPredicted RBP17.45■□□□□ 0.38
NDEL1-203ENST00000402554 BTG4Q9NY30 223 aa17.45■□□□□ 0.38
NDEL1-203ENST00000402554 GLI3P10071 1580 aa17.44■□□□□ 0.38
NDEL1-203ENST00000402554 GCP02774 474 aa17.44■□□□□ 0.38
NDEL1-203ENST00000402554 RXRBP28702 533 aa17.44■□□□□ 0.38
NDEL1-203ENST00000402554 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
NDEL1-203ENST00000402554 UNC5CLQ8IV45 518 aa17.44■□□□□ 0.38
NDEL1-203ENST00000402554 KIF20BQ96Q89 1820 aa17.44■□□□□ 0.38
NDEL1-203ENST00000402554 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
NDEL1-203ENST00000402554 NEFLP07196 543 aa17.44■□□□□ 0.38
NDEL1-203ENST00000402554 TRPC5Q9UL62 973 aaPredicted RBP17.44■□□□□ 0.38
NDEL1-203ENST00000402554 RGS12O14924 1447 aa17.43■□□□□ 0.38
NDEL1-203ENST00000402554 NFAT5O94916 1531 aa17.43■□□□□ 0.38
NDEL1-203ENST00000402554 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
NDEL1-203ENST00000402554 LTN1O94822 1766 aa17.41■□□□□ 0.38
NDEL1-203ENST00000402554 RGPD5Q99666 1765 aa17.41■□□□□ 0.38
NDEL1-203ENST00000402554 RBM6P78332 1123 aaKnown RBP17.41■□□□□ 0.38
NDEL1-203ENST00000402554 ADAMTS8Q9UP79 889 aa17.41■□□□□ 0.38
NDEL1-203ENST00000402554 CAMTA1Q9Y6Y1 1673 aa17.41■□□□□ 0.38
NDEL1-203ENST00000402554 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
NDEL1-203ENST00000402554 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
NDEL1-203ENST00000402554 SMG6Q86US8 1419 aaKnown RBP17.41■□□□□ 0.38
NDEL1-203ENST00000402554 COL18A1P39060 1754 aa17.4■□□□□ 0.38
NDEL1-203ENST00000402554 CPDO75976 1380 aa17.4■□□□□ 0.38
NDEL1-203ENST00000402554 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
NDEL1-203ENST00000402554 SENP3-EIF4A1A0A087X0R7 540 aa17.4■□□□□ 0.38
NDEL1-203ENST00000402554 CCDC9Q9Y3X0 531 aaKnown RBP17.4■□□□□ 0.38
NDEL1-203ENST00000402554 FKBP8Q14318 412 aa17.39■□□□□ 0.37
NDEL1-203ENST00000402554 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
NDEL1-203ENST00000402554 GJD4Q96KN9 370 aaPredicted RBP17.38■□□□□ 0.37
NDEL1-203ENST00000402554 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
NDEL1-203ENST00000402554 CDK12Q9NYV4 1490 aaPredicted RBP17.38■□□□□ 0.37
NDEL1-203ENST00000402554 NUDCQ9Y266 331 aa17.37■□□□□ 0.37
NDEL1-203ENST00000402554 VPS72Q15906 364 aa17.37■□□□□ 0.37
NDEL1-203ENST00000402554 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
NDEL1-203ENST00000402554 SOCS7O14512 581 aa17.36■□□□□ 0.37
NDEL1-203ENST00000402554 BRWD3Q6RI45 1802 aa17.36■□□□□ 0.37
NDEL1-203ENST00000402554 KCNH5Q8NCM2 988 aa17.35■□□□□ 0.37
NDEL1-203ENST00000402554 COL5A2P05997 1499 aaPredicted RBP17.35■□□□□ 0.37
NDEL1-203ENST00000402554 FYB1O15117 783 aa17.35■□□□□ 0.37
NDEL1-203ENST00000402554 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
NDEL1-203ENST00000402554 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
NDEL1-203ENST00000402554 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
NDEL1-203ENST00000402554 FBLN1P23142 703 aa17.34■□□□□ 0.37
NDEL1-203ENST00000402554 ARHGEF25Q86VW2 580 aa17.34■□□□□ 0.37
NDEL1-203ENST00000402554 AATKQ6ZMQ8 1374 aa17.33■□□□□ 0.37
NDEL1-203ENST00000402554 COG3Q96JB2 828 aa17.33■□□□□ 0.37
NDEL1-203ENST00000402554 CFAP53Q96M91 514 aa17.33■□□□□ 0.37
NDEL1-203ENST00000402554 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.37
NDEL1-203ENST00000402554 MTHFSP49914 203 aa17.33■□□□□ 0.36
NDEL1-203ENST00000402554 LARP1Q6PKG0 1096 aaKnown RBP17.33■□□□□ 0.36
NDEL1-203ENST00000402554 EVA1CP58658 441 aa17.32■□□□□ 0.36
NDEL1-203ENST00000402554 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
NDEL1-203ENST00000402554 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
NDEL1-203ENST00000402554 FAM98CQ17RN3 349 aaKnown RBP17.31■□□□□ 0.36
NDEL1-203ENST00000402554 USP35Q9P2H5 1018 aa17.31■□□□□ 0.36
NDEL1-203ENST00000402554 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
NDEL1-203ENST00000402554 A0A0G2JS52 829 aa17.29■□□□□ 0.36
NDEL1-203ENST00000402554 MYT1Q01538 1121 aa17.29■□□□□ 0.36
NDEL1-203ENST00000402554 SPATA31A1Q5TZJ5 1347 aa17.29■□□□□ 0.36
NDEL1-203ENST00000402554 ABCC6O95255 1503 aa17.28■□□□□ 0.36
NDEL1-203ENST00000402554 WNK3Q9BYP7 1800 aa17.28■□□□□ 0.36
NDEL1-203ENST00000402554 PEAK1Q9H792 1746 aa17.28■□□□□ 0.36
NDEL1-203ENST00000402554 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
NDEL1-203ENST00000402554 RRS1Q15050 365 aaKnown RBP17.27■□□□□ 0.36
NDEL1-203ENST00000402554 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
NDEL1-203ENST00000402554 MAP3K19Q56UN5 1328 aa17.26■□□□□ 0.35
NDEL1-203ENST00000402554 CRB1P82279 1406 aa17.26■□□□□ 0.35
NDEL1-203ENST00000402554 EP400Q96L91 3159 aa17.25■□□□□ 0.35
NDEL1-203ENST00000402554 RGPD2P0DJD1 1756 aa17.25■□□□□ 0.35
NDEL1-203ENST00000402554 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
NDEL1-203ENST00000402554 CSB-PGBD3P0DP91 1061 aa17.24■□□□□ 0.35
NDEL1-203ENST00000402554 TOM1L2Q6ZVM7 507 aa17.24■□□□□ 0.35
NDEL1-203ENST00000402554 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
NDEL1-203ENST00000402554 CDCA7LQ96GN5 454 aa17.24■□□□□ 0.35
NDEL1-203ENST00000402554 APAF1O14727 1248 aa17.23■□□□□ 0.35
NDEL1-203ENST00000402554 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
NDEL1-203ENST00000402554 MAP2P11137 1827 aaKnown RBP17.23■□□□□ 0.35
NDEL1-203ENST00000402554 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
NDEL1-203ENST00000402554 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
NDEL1-203ENST00000402554 ERICH6BQ5W0A0 696 aa17.22■□□□□ 0.35
NDEL1-203ENST00000402554 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
NDEL1-203ENST00000402554 HOXC9P31274 260 aa17.22■□□□□ 0.35
NDEL1-203ENST00000402554 AMPHP49418 695 aa17.22■□□□□ 0.35
NDEL1-203ENST00000402554 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
NDEL1-203ENST00000402554 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
NDEL1-203ENST00000402554 ERBB3P21860 1342 aa17.22■□□□□ 0.35
NDEL1-203ENST00000402554 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
NDEL1-203ENST00000402554 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
NDEL1-203ENST00000402554 IP6K1Q92551 441 aa17.21■□□□□ 0.35
NDEL1-203ENST00000402554 RUNDC1Q96C34 613 aa17.21■□□□□ 0.35
NDEL1-203ENST00000402554 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.35
NDEL1-203ENST00000402554 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.35
NDEL1-203ENST00000402554 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
NDEL1-203ENST00000402554 FAM182BQ5T319 152 aa17.2■□□□□ 0.34
NDEL1-203ENST00000402554 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
NDEL1-203ENST00000402554 U2AF1L5P0DN76 240 aaPredicted RBP17.19■□□□□ 0.34
NDEL1-203ENST00000402554 U2AF1Q01081 240 aaKnown RBP eCLIP17.19■□□□□ 0.341e-9■□□□□ 8.6
NDEL1-203ENST00000402554 GOLGA2Q08379 1002 aa17.19■□□□□ 0.34
NDEL1-203ENST00000402554 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.343e-7■■■□□ 17.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms