RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
SNED1-204ENST00000401884 TULP1O00294 542 aaPredicted RBP21.34■■□□□ 1.01
SNED1-204ENST00000401884 POLR3AO14802 1390 aaPredicted RBP21.34■■□□□ 1.01
SNED1-204ENST00000401884 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
SNED1-204ENST00000401884 ISY1Q9ULR0 285 aaKnown RBP21.33■■□□□ 1.01
SNED1-204ENST00000401884 RNF123Q5XPI4 1314 aa21.33■■□□□ 1
SNED1-204ENST00000401884 CPLX2Q6PUV4 134 aaKnown RBP21.33■■□□□ 1
SNED1-204ENST00000401884 TBC1D32Q96NH3 1257 aa21.33■■□□□ 1
SNED1-204ENST00000401884 GRPEL1Q9HAV7 217 aa21.33■■□□□ 1
SNED1-204ENST00000401884 SRGAP3O43295 1099 aa21.32■■□□□ 1
SNED1-204ENST00000401884 GTF2E1P29083 439 aaPredicted RBP21.32■■□□□ 1
SNED1-204ENST00000401884 C8orf34Q49A92 452 aa21.32■■□□□ 1
SNED1-204ENST00000401884 CPLX1O14810 134 aa21.32■■□□□ 1
SNED1-204ENST00000401884 IL16Q14005 1332 aa21.32■■□□□ 1
SNED1-204ENST00000401884 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
SNED1-204ENST00000401884 CCDC27Q2M243 656 aa21.32■■□□□ 1
SNED1-204ENST00000401884 ATF3P18847 181 aa21.31■■□□□ 1
SNED1-204ENST00000401884 TNNQ9UQP3 1299 aa21.31■■□□□ 1
SNED1-204ENST00000401884 A2MP01023 1474 aa21.31■■□□□ 1
SNED1-204ENST00000401884 PIK3C2GO75747 1445 aa21.31■■□□□ 1
SNED1-204ENST00000401884 SMARCA5O60264 1052 aaPredicted RBP21.31■■□□□ 1
SNED1-204ENST00000401884 ANKRD36BQ8N2N9 1353 aa21.31■■□□□ 1
SNED1-204ENST00000401884 DENND4BO75064 1496 aaPredicted RBP21.3■■□□□ 1
SNED1-204ENST00000401884 RLBP1P12271 317 aa21.3■■□□□ 1
SNED1-204ENST00000401884 PSMA5P28066 241 aa21.3■■□□□ 1
SNED1-204ENST00000401884 APPP05067 770 aa21.29■■□□□ 1
SNED1-204ENST00000401884 F6X3S4 739 aa21.29■■□□□ 1
SNED1-204ENST00000401884 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.29■■□□□ 1
SNED1-204ENST00000401884 FAM83GA6ND36 823 aa21.29■■□□□ 1
SNED1-204ENST00000401884 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
SNED1-204ENST00000401884 MAP4K4O95819 1239 aaPredicted RBP21.28■■□□□ 1
SNED1-204ENST00000401884 GNAT3A8MTJ3 354 aa21.28■■□□□ 1
SNED1-204ENST00000401884 FIBPO43427 364 aa21.28■■□□□ 1
SNED1-204ENST00000401884 BMP2KLQ5H9B9 411 aa21.28■■□□□ 1
SNED1-204ENST00000401884 MBIPQ9NS73 344 aa21.28■■□□□ 1
SNED1-204ENST00000401884 ERC1Q8IUD2 1116 aa21.28■■□□□ 1
SNED1-204ENST00000401884 HDAC1Q13547 482 aaPredicted RBP21.27■■□□□ 1
SNED1-204ENST00000401884 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.27■■□□□ 1
SNED1-204ENST00000401884 TRDNQ13061 729 aa21.27■□□□□ 0.99
SNED1-204ENST00000401884 FAM13BQ9NYF5 915 aa21.26■□□□□ 0.99
SNED1-204ENST00000401884 FOSBP53539 338 aa21.26■□□□□ 0.99
SNED1-204ENST00000401884 PROSER2Q86WR7 435 aaPredicted RBP21.25■□□□□ 0.99
SNED1-204ENST00000401884 SASS6Q6UVJ0 657 aa21.25■□□□□ 0.99
SNED1-204ENST00000401884 PDCP20941 246 aa21.25■□□□□ 0.99
SNED1-204ENST00000401884 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
SNED1-204ENST00000401884 CCDC173Q0VFZ6 552 aa21.24■□□□□ 0.99
SNED1-204ENST00000401884 SYNE3Q6ZMZ3 975 aa21.24■□□□□ 0.99
SNED1-204ENST00000401884 SYTL4Q96C24 671 aaPredicted RBP21.24■□□□□ 0.99
SNED1-204ENST00000401884 SIL1Q9H173 461 aa21.24■□□□□ 0.99
SNED1-204ENST00000401884 ASXL2Q76L83 1435 aa21.24■□□□□ 0.99
SNED1-204ENST00000401884 HIP1O00291 1037 aa21.24■□□□□ 0.99
SNED1-204ENST00000401884 EIF2AK4Q9P2K8 1649 aaKnown RBP21.23■□□□□ 0.99
SNED1-204ENST00000401884 TBC1D9Q6ZT07 1266 aa21.23■□□□□ 0.99
SNED1-204ENST00000401884 UPF3BQ9BZI7 483 aaKnown RBP21.23■□□□□ 0.99
SNED1-204ENST00000401884 WASHC4Q2M389 1173 aa21.23■□□□□ 0.99
SNED1-204ENST00000401884 RASSF8Q8NHQ8 419 aa21.23■□□□□ 0.99
SNED1-204ENST00000401884 PUS7Q96PZ0 661 aaKnown RBP21.23■□□□□ 0.99
SNED1-204ENST00000401884 WDR33Q9C0J8 1336 aaKnown RBP21.23■□□□□ 0.99
SNED1-204ENST00000401884 DNAJC2Q99543 621 aaKnown RBP21.23■□□□□ 0.99
SNED1-204ENST00000401884 CYP46A1Q9Y6A2 500 aa21.23■□□□□ 0.99
SNED1-204ENST00000401884 MX1P20591 662 aa21.22■□□□□ 0.99
SNED1-204ENST00000401884 CCDC73Q6ZRK6 1079 aa21.22■□□□□ 0.99
SNED1-204ENST00000401884 CREBRFQ8IUR6 639 aa21.22■□□□□ 0.99
SNED1-204ENST00000401884 CWC27Q6UX04 472 aaKnown RBP21.21■□□□□ 0.99
SNED1-204ENST00000401884 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
SNED1-204ENST00000401884 R3HCC1Q9Y3T6 440 aaKnown RBP21.21■□□□□ 0.99
SNED1-204ENST00000401884 BTBD11A6QL63 1104 aa21.21■□□□□ 0.99
SNED1-204ENST00000401884 ARHGAP45Q92619 1136 aa21.21■□□□□ 0.99
SNED1-204ENST00000401884 RALYLQ86SE5 291 aaKnown RBP21.21■□□□□ 0.99
SNED1-204ENST00000401884 CCDC39Q9UFE4 941 aa21.21■□□□□ 0.99
SNED1-204ENST00000401884 AKAP17AQ02040 695 aaKnown RBP21.21■□□□□ 0.99
SNED1-204ENST00000401884 TAF7Q15545 349 aaPredicted RBP21.21■□□□□ 0.99
SNED1-204ENST00000401884 TSPY26PQ9H489 355 aa21.21■□□□□ 0.99
SNED1-204ENST00000401884 AMOTL2Q9Y2J4 779 aa21.21■□□□□ 0.99
SNED1-204ENST00000401884 NPC1L1Q9UHC9 1359 aa21.21■□□□□ 0.99
SNED1-204ENST00000401884 TATP17735 454 aaPredicted RBP21.2■□□□□ 0.98
SNED1-204ENST00000401884 NUCB1Q02818 461 aa21.2■□□□□ 0.98
SNED1-204ENST00000401884 POLKQ9UBT6 870 aa21.2■□□□□ 0.98
SNED1-204ENST00000401884 ESPNB1AK53 854 aa21.2■□□□□ 0.98
SNED1-204ENST00000401884 TRIM29Q14134 588 aa21.2■□□□□ 0.98
SNED1-204ENST00000401884 TNPO1Q92973 898 aaKnown RBP21.2■□□□□ 0.98
SNED1-204ENST00000401884 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
SNED1-204ENST00000401884 ANKLE2Q86XL3 938 aa21.19■□□□□ 0.98
SNED1-204ENST00000401884 GCC2Q8IWJ2 1684 aa21.19■□□□□ 0.98
SNED1-204ENST00000401884 XPCQ01831 940 aaPredicted RBP21.19■□□□□ 0.98
SNED1-204ENST00000401884 AACSQ86V21 672 aa21.19■□□□□ 0.98
SNED1-204ENST00000401884 ZNF592Q92610 1267 aa21.18■□□□□ 0.98
SNED1-204ENST00000401884 ANO8Q9HCE9 1232 aaPredicted RBP21.18■□□□□ 0.98
SNED1-204ENST00000401884 MYL6BP14649 208 aa21.18■□□□□ 0.98
SNED1-204ENST00000401884 KIF1BPQ96EK5 621 aa21.18■□□□□ 0.98
SNED1-204ENST00000401884 KDM6BO15054 1643 aa21.18■□□□□ 0.98
SNED1-204ENST00000401884 WDR7Q9Y4E6 1490 aa21.18■□□□□ 0.98
SNED1-204ENST00000401884 PTPRCP08575 1304 aa21.17■□□□□ 0.98
SNED1-204ENST00000401884 ZNF518AQ6AHZ1 1483 aa21.17■□□□□ 0.98
SNED1-204ENST00000401884 SSFA2P28290 1259 aa21.17■□□□□ 0.98
SNED1-204ENST00000401884 PPP6R1Q9UPN7 881 aa21.17■□□□□ 0.98
SNED1-204ENST00000401884 SEC24BO95487 1268 aa21.17■□□□□ 0.98
SNED1-204ENST00000401884 HSP90AB2PQ58FF8 381 aa21.17■□□□□ 0.98
SNED1-204ENST00000401884 FBXW7Q969H0 707 aa21.17■□□□□ 0.98
SNED1-204ENST00000401884 FLIIQ13045 1269 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms