RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 DNAJC2Q99543 621 aaKnown RBP15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 NACAP1Q9BZK3 213 aa15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 CEBPZQ03701 1054 aaKnown RBP15.83■□□□□ 0.12
LDLRAD4-203ENST00000399848 TRIM21P19474 475 aaKnown RBP15.83■□□□□ 0.12
LDLRAD4-203ENST00000399848 DYDC1Q8WWB3 177 aa15.82■□□□□ 0.12
LDLRAD4-203ENST00000399848 SRCIN1Q9C0H9 1055 aa15.82■□□□□ 0.12
LDLRAD4-203ENST00000399848 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
LDLRAD4-203ENST00000399848 TTC39AQ5SRH9 613 aa15.82■□□□□ 0.12
LDLRAD4-203ENST00000399848 TAX1BP1Q86VP1 789 aa15.81■□□□□ 0.12
LDLRAD4-203ENST00000399848 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
LDLRAD4-203ENST00000399848 CCDC69A6NI79 296 aa15.81■□□□□ 0.12
LDLRAD4-203ENST00000399848 TANGO6Q9C0B7 1094 aa15.81■□□□□ 0.12
LDLRAD4-203ENST00000399848 NOL7Q9UMY1 257 aaKnown RBP15.81■□□□□ 0.12
LDLRAD4-203ENST00000399848 CCT4P50991 539 aaKnown RBP15.8■□□□□ 0.12
LDLRAD4-203ENST00000399848 K7ELQ4 463 aaPredicted RBP15.8■□□□□ 0.12
LDLRAD4-203ENST00000399848 LRRFIP2Q9Y608 721 aaKnown RBP15.8■□□□□ 0.12
LDLRAD4-203ENST00000399848 ZSCAN25Q6NSZ9 544 aa15.8■□□□□ 0.12
LDLRAD4-203ENST00000399848 UQCRHLA0A096LP55 91 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 UQCRHP07919 91 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 SLC26A8Q96RN1 970 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 BMP2KQ9NSY1 1161 aaPredicted RBP15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 RRP9O43818 475 aaKnown RBP15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 PDCL2Q8N4E4 241 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 GRPEL1Q9HAV7 217 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 SMTNL1A8MU46 457 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 CEP57L1Q8IYX8 460 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 CNNM1Q9NRU3 951 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 NLRP2Q9NX02 1062 aa15.79■□□□□ 0.12
LDLRAD4-203ENST00000399848 KIF2AO00139 706 aaPredicted RBP15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 JAKMIP3Q5VZ66 844 aa15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 ZNF397Q8NF99 534 aaPredicted RBP15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 PTPRGP23470 1445 aa15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 CCDC91Q7Z6B0 441 aa15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 BEGAINQ9BUH8 593 aa15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 KDM4AO75164 1064 aa15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 RBM10P98175 930 aaKnown RBP15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 LARP1BQ659C4 914 aaKnown RBP15.78■□□□□ 0.12
LDLRAD4-203ENST00000399848 PKNOX2Q96KN3 472 aa15.77■□□□□ 0.12
LDLRAD4-203ENST00000399848 KIAA1328Q86T90 577 aa15.77■□□□□ 0.12
LDLRAD4-203ENST00000399848 MCM3P25205 808 aa15.77■□□□□ 0.11
LDLRAD4-203ENST00000399848 PPM1FP49593 454 aaPredicted RBP15.77■□□□□ 0.11
LDLRAD4-203ENST00000399848 GBP3Q9H0R5 595 aa15.77■□□□□ 0.11
LDLRAD4-203ENST00000399848 KIF21BO75037 1637 aa15.77■□□□□ 0.11
LDLRAD4-203ENST00000399848 MAP9Q49MG5 647 aa15.77■□□□□ 0.11
LDLRAD4-203ENST00000399848 FAM177A1Q8N128 213 aaPredicted RBP15.77■□□□□ 0.11
LDLRAD4-203ENST00000399848 CCDC148Q8NFR7 591 aa15.77■□□□□ 0.11
LDLRAD4-203ENST00000399848 CCDC57Q2TAC2 916 aa15.77■□□□□ 0.11
LDLRAD4-203ENST00000399848 EPB41L2O43491 1005 aaKnown RBP15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 PLEKHO1Q53GL0 409 aaPredicted RBP15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 ZHX3Q9H4I2 956 aa15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 SPATA32Q96LK8 384 aa15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 CIZ1Q9ULV3 898 aaPredicted RBP15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 SOGA3Q5TF21 947 aa15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 DNAI2Q9GZS0 605 aa15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 FGD6Q6ZV73 1430 aa15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 MTHFSP49914 203 aa15.76■□□□□ 0.11
LDLRAD4-203ENST00000399848 KRT32Q14532 448 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 FAM193AP78312 1265 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 CCDC102AQ96A19 550 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 PDZRN3Q9UPQ7 1066 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 PROSER2Q86WR7 435 aaPredicted RBP15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 WASF1Q92558 559 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 SUPT6HQ7KZ85 1726 aaKnown RBP15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 IMMTQ16891 758 aaKnown RBP15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 CRACR2AQ9BSW2 395 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 ATP2B2Q01814 1243 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 ARHGAP5Q13017 1502 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 TWISTNBQ3B726 338 aaPredicted RBP15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 UPF3BQ9BZI7 483 aaKnown RBP15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 BRPF3Q9ULD4 1205 aa15.75■□□□□ 0.11
LDLRAD4-203ENST00000399848 NUP62CLQ9H1M0 184 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 CEP131Q9UPN4 1083 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 PPP1R12BO60237 982 aaPredicted RBP15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 ARHGAP29Q52LW3 1261 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 TCP11L2Q8N4U5 519 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 ADAMTS8Q9UP79 889 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 TAF4BQ92750 862 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 CETN2P41208 172 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 SEPT11Q9NVA2 429 aaKnown RBP15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 CTNNA3Q9UI47 895 aa15.74■□□□□ 0.11
LDLRAD4-203ENST00000399848 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 BLOC1S2Q6QNY1 142 aa15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 NOB1Q9ULX3 412 aaKnown RBP15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 TTLL12Q14166 644 aaPredicted RBP15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 UBXN4Q92575 508 aa15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 ZSCAN31Q96LW9 406 aaPredicted RBP15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 NLRP6P59044 892 aa15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 GGNBP2Q9H3C7 697 aa15.73■□□□□ 0.11
LDLRAD4-203ENST00000399848 STK3Q13188 491 aa15.72■□□□□ 0.11
LDLRAD4-203ENST00000399848 ABTB2Q8N961 1025 aa15.72■□□□□ 0.11
LDLRAD4-203ENST00000399848 SHTN1A0MZ66 631 aa15.72■□□□□ 0.11
LDLRAD4-203ENST00000399848 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
LDLRAD4-203ENST00000399848 EIF5P55010 431 aaKnown RBP15.71■□□□□ 0.11
LDLRAD4-203ENST00000399848 MAP3K11Q16584 847 aa15.71■□□□□ 0.1
LDLRAD4-203ENST00000399848 PNISRQ8TF01 805 aaKnown RBP15.71■□□□□ 0.1
LDLRAD4-203ENST00000399848 MAP2K1Q02750 393 aaPredicted RBP15.71■□□□□ 0.1
LDLRAD4-203ENST00000399848 CABP2Q9NPB3 220 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms