RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 MARF1Q9Y4F3 1742 aaKnown RBP19.71■□□□□ 0.75
MBD1-209ENST00000398495 RLBP1P12271 317 aa19.71■□□□□ 0.75
MBD1-209ENST00000398495 SOX12O15370 315 aa19.7■□□□□ 0.74
MBD1-209ENST00000398495 THUMPD2Q9BTF0 503 aaKnown RBP19.7■□□□□ 0.74
MBD1-209ENST00000398495 MSH5O43196 834 aa19.68■□□□□ 0.74
MBD1-209ENST00000398495 NPHP4O75161 1426 aaPredicted RBP19.68■□□□□ 0.74
MBD1-209ENST00000398495 MS4A1P11836 297 aa19.68■□□□□ 0.74
MBD1-209ENST00000398495 AEBP1Q8IUX7 1158 aa19.68■□□□□ 0.74
MBD1-209ENST00000398495 USP54Q70EL1 1684 aa19.68■□□□□ 0.74
MBD1-209ENST00000398495 CLUAP1Q96AJ1 413 aa19.67■□□□□ 0.74
MBD1-209ENST00000398495 HSP90AB2PQ58FF8 381 aa19.67■□□□□ 0.74
MBD1-209ENST00000398495 SSH1Q8WYL5 1049 aa19.67■□□□□ 0.74
MBD1-209ENST00000398495 SMC4Q9NTJ3 1288 aa19.67■□□□□ 0.74
MBD1-209ENST00000398495 MAP3K19Q56UN5 1328 aa19.66■□□□□ 0.74
MBD1-209ENST00000398495 RBM33Q96EV2 1170 aaKnown RBP19.66■□□□□ 0.74
MBD1-209ENST00000398495 LAS1LQ9Y4W2 734 aaKnown RBP19.66■□□□□ 0.74
MBD1-209ENST00000398495 IGHDP01880 384 aa19.64■□□□□ 0.74
MBD1-209ENST00000398495 ZKSCAN2Q63HK3 967 aa19.64■□□□□ 0.74
MBD1-209ENST00000398495 SULT6B1Q6IMI4 303 aa19.64■□□□□ 0.74
MBD1-209ENST00000398495 ADGRL3Q9HAR2 1447 aa19.64■□□□□ 0.74
MBD1-209ENST00000398495 SBNO1A3KN83 1393 aa19.63■□□□□ 0.73
MBD1-209ENST00000398495 PDE4AP27815 886 aa19.63■□□□□ 0.73
MBD1-209ENST00000398495 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
MBD1-209ENST00000398495 FLT4P35916 1363 aa19.62■□□□□ 0.73
MBD1-209ENST00000398495 LMOD3Q0VAK6 560 aa19.62■□□□□ 0.73
MBD1-209ENST00000398495 IFT57Q9NWB7 429 aa19.62■□□□□ 0.73
MBD1-209ENST00000398495 FAM83GA6ND36 823 aa19.61■□□□□ 0.73
MBD1-209ENST00000398495 ZNF853P0CG23 659 aa19.61■□□□□ 0.73
MBD1-209ENST00000398495 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
MBD1-209ENST00000398495 ARHGEF10O15013 1369 aa19.61■□□□□ 0.73
MBD1-209ENST00000398495 NUTM2GQ5VZR2 741 aa19.61■□□□□ 0.73
MBD1-209ENST00000398495 DZIP1LQ8IYY4 767 aaKnown RBP19.61■□□□□ 0.73
MBD1-209ENST00000398495 NLRP6P59044 892 aa19.6■□□□□ 0.73
MBD1-209ENST00000398495 MVPQ14764 893 aaKnown RBP19.6■□□□□ 0.73
MBD1-209ENST00000398495 BACH2Q9BYV9 841 aa19.6■□□□□ 0.73
MBD1-209ENST00000398495 PHF8Q9UPP1 1060 aa19.6■□□□□ 0.73
MBD1-209ENST00000398495 TRIM27P14373 513 aa19.6■□□□□ 0.73
MBD1-209ENST00000398495 GNAI1P63096 354 aa19.6■□□□□ 0.73
MBD1-209ENST00000398495 FTSJ3Q8IY81 847 aaKnown RBP19.6■□□□□ 0.73
MBD1-209ENST00000398495 DCTN1Q14203 1278 aa19.59■□□□□ 0.73
MBD1-209ENST00000398495 MBIPQ9NS73 344 aa19.59■□□□□ 0.73
MBD1-209ENST00000398495 NOB1Q9ULX3 412 aaKnown RBP19.59■□□□□ 0.73
MBD1-209ENST00000398495 AAMPQ13685 434 aa19.58■□□□□ 0.72
MBD1-209ENST00000398495 PCDHB15Q9Y5E8 787 aa19.58■□□□□ 0.72
MBD1-209ENST00000398495 ALDH1L2Q3SY69 923 aa19.57■□□□□ 0.72
MBD1-209ENST00000398495 ATF7IPQ6VMQ6 1270 aa19.57■□□□□ 0.72
MBD1-209ENST00000398495 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
MBD1-209ENST00000398495 AMPHP49418 695 aa19.57■□□□□ 0.72
MBD1-209ENST00000398495 KIF16BQ96L93 1317 aa19.56■□□□□ 0.72
MBD1-209ENST00000398495 TSPYL6Q8N831 410 aa19.56■□□□□ 0.72
MBD1-209ENST00000398495 ABTB2Q8N961 1025 aa19.56■□□□□ 0.72
MBD1-209ENST00000398495 CFAP44Q96MT7 982 aa19.56■□□□□ 0.72
MBD1-209ENST00000398495 VAMP4O75379 141 aa19.55■□□□□ 0.72
MBD1-209ENST00000398495 RGS3P49796 1198 aa19.55■□□□□ 0.72
MBD1-209ENST00000398495 LTN1O94822 1766 aa19.54■□□□□ 0.72
MBD1-209ENST00000398495 IGSF1Q8N6C5 1336 aa19.53■□□□□ 0.72
MBD1-209ENST00000398495 C14orf37Q86TY3 774 aa19.53■□□□□ 0.72
MBD1-209ENST00000398495 ZNF428Q96B54 188 aa19.53■□□□□ 0.72
MBD1-209ENST00000398495 KDRP35968 1356 aa19.53■□□□□ 0.72
MBD1-209ENST00000398495 HOXC9P31274 260 aa19.53■□□□□ 0.72
MBD1-209ENST00000398495 ITPRIPQ8IWB1 547 aa19.53■□□□□ 0.72
MBD1-209ENST00000398495 EYA1Q99502 592 aa19.53■□□□□ 0.72
MBD1-209ENST00000398495 NFAT5O94916 1531 aa19.52■□□□□ 0.72
MBD1-209ENST00000398495 ANP32AP39687 249 aaKnown RBP19.52■□□□□ 0.72
MBD1-209ENST00000398495 ESCO1Q5FWF5 840 aa19.52■□□□□ 0.72
MBD1-209ENST00000398495 MCM10Q7L590 875 aa19.52■□□□□ 0.72
MBD1-209ENST00000398495 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
MBD1-209ENST00000398495 MRPL50Q8N5N7 158 aaKnown RBP19.52■□□□□ 0.72
MBD1-209ENST00000398495 C8orf58Q8NAV2 365 aa19.52■□□□□ 0.72
MBD1-209ENST00000398495 ELL2O00472 640 aaPredicted RBP19.51■□□□□ 0.71
MBD1-209ENST00000398495 IPO8O15397 1037 aaKnown RBP19.51■□□□□ 0.71
MBD1-209ENST00000398495 KIF24Q5T7B8 1368 aa19.51■□□□□ 0.71
MBD1-209ENST00000398495 BRPF1P55201 1214 aaPredicted RBP19.51■□□□□ 0.71
MBD1-209ENST00000398495 TWISTNBQ3B726 338 aaPredicted RBP19.51■□□□□ 0.71
MBD1-209ENST00000398495 DDX19BQ9UMR2 479 aa19.5■□□□□ 0.71
MBD1-209ENST00000398495 FOXO3O43524 673 aa19.49■□□□□ 0.71
MBD1-209ENST00000398495 NPM2Q86SE8 214 aaKnown RBP19.49■□□□□ 0.71
MBD1-209ENST00000398495 ANP32EQ9BTT0 268 aa19.49■□□□□ 0.71
MBD1-209ENST00000398495 CRB1P82279 1406 aa19.49■□□□□ 0.71
MBD1-209ENST00000398495 MTHFSDQ2M296 383 aaKnown RBP19.49■□□□□ 0.71
MBD1-209ENST00000398495 RTL1A6NKG5 1358 aa19.48■□□□□ 0.71
MBD1-209ENST00000398495 PSME1Q06323 249 aa19.47■□□□□ 0.71
MBD1-209ENST00000398495 C8orf34Q49A92 452 aa19.47■□□□□ 0.71
MBD1-209ENST00000398495 ORAI2Q96SN7 254 aa19.47■□□□□ 0.71
MBD1-209ENST00000398495 RWDD1Q9H446 243 aaPredicted RBP19.47■□□□□ 0.71
MBD1-209ENST00000398495 VIRMAQ69YN4 1812 aaKnown RBP19.47■□□□□ 0.71
MBD1-209ENST00000398495 LRRC37A3O60309 1634 aa19.47■□□□□ 0.71
MBD1-209ENST00000398495 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
MBD1-209ENST00000398495 CHL1O00533 1208 aa19.46■□□□□ 0.71
MBD1-209ENST00000398495 PROSER2Q86WR7 435 aaPredicted RBP19.46■□□□□ 0.71
MBD1-209ENST00000398495 LTV1Q96GA3 475 aaPredicted RBP19.46■□□□□ 0.71
MBD1-209ENST00000398495 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
MBD1-209ENST00000398495 KRT24Q2M2I5 525 aa19.45■□□□□ 0.7
MBD1-209ENST00000398495 IPO9Q96P70 1041 aaKnown RBP19.45■□□□□ 0.7
MBD1-209ENST00000398495 STRCP1A6NGW2 1772 aa19.45■□□□□ 0.7
MBD1-209ENST00000398495 ARHGAP45Q92619 1136 aa19.44■□□□□ 0.7
MBD1-209ENST00000398495 PDZRN3Q9UPQ7 1066 aa19.44■□□□□ 0.7
MBD1-209ENST00000398495 PHRF1Q9P1Y6 1649 aaKnown RBP19.44■□□□□ 0.7
MBD1-209ENST00000398495 KIF1AQ12756 1690 aa19.44■□□□□ 0.7
MBD1-209ENST00000398495 XPCQ01831 940 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms