RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 RAPGEF3O95398 923 aa29.22■■■□□ 2.27
KHSRP-201ENST00000398148 ZSCAN23Q3MJ62 389 aa29.22■■■□□ 2.27
KHSRP-201ENST00000398148 NPATQ14207 1427 aa29.22■■■□□ 2.27
KHSRP-201ENST00000398148 PLEKHM2Q8IWE5 1019 aa29.22■■■□□ 2.27
KHSRP-201ENST00000398148 NSFL1CQ9UNZ2 370 aaKnown RBP29.22■■■□□ 2.27
KHSRP-201ENST00000398148 CCDC173Q0VFZ6 552 aa29.22■■■□□ 2.27
KHSRP-201ENST00000398148 RRS1Q15050 365 aaKnown RBP29.21■■■□□ 2.27
KHSRP-201ENST00000398148 SHROOM2Q13796 1616 aa29.21■■■□□ 2.27
KHSRP-201ENST00000398148 DTNBO60941 627 aa29.21■■■□□ 2.27
KHSRP-201ENST00000398148 WAPLQ7Z5K2 1190 aa29.21■■■□□ 2.27
KHSRP-201ENST00000398148 CDK19Q9BWU1 502 aa29.21■■■□□ 2.27
KHSRP-201ENST00000398148 ZSCAN30Q86W11 494 aa29.2■■■□□ 2.27
KHSRP-201ENST00000398148 ALDH1L2Q3SY69 923 aa29.19■■■□□ 2.26
KHSRP-201ENST00000398148 TULP4Q9NRJ4 1543 aa29.19■■■□□ 2.26
KHSRP-201ENST00000398148 KLHL40Q2TBA0 621 aa29.19■■■□□ 2.26
KHSRP-201ENST00000398148 POLKQ9UBT6 870 aa29.19■■■□□ 2.26
KHSRP-201ENST00000398148 SYCE3A1L190 88 aa29.18■■■□□ 2.26
KHSRP-201ENST00000398148 HDGFL2Q7Z4V5 671 aaPredicted RBP29.18■■■□□ 2.26
KHSRP-201ENST00000398148 NCKAP5LQ9HCH0 1330 aa29.17■■■□□ 2.26
KHSRP-201ENST00000398148 KIAA1210Q9ULL0 1709 aa29.17■■■□□ 2.26
KHSRP-201ENST00000398148 LMBRD1Q9NUN5 540 aa29.16■■■□□ 2.26
KHSRP-201ENST00000398148 MIS18AQ9NYP9 233 aa29.16■■■□□ 2.26
KHSRP-201ENST00000398148 PPRC1Q5VV67 1664 aaKnown RBP29.15■■■□□ 2.26
KHSRP-201ENST00000398148 FCHSD2O94868 740 aa29.15■■■□□ 2.26
KHSRP-201ENST00000398148 GPT2Q8TD30 523 aa29.14■■■□□ 2.26
KHSRP-201ENST00000398148 IL16Q14005 1332 aa29.14■■■□□ 2.26
KHSRP-201ENST00000398148 SDSP20132 328 aa29.14■■■□□ 2.26
KHSRP-201ENST00000398148 NFE2L2Q16236 605 aa29.14■■■□□ 2.26
KHSRP-201ENST00000398148 ISY1Q9ULR0 285 aaKnown RBP29.14■■■□□ 2.26
KHSRP-201ENST00000398148 SLC4A10Q6U841 1118 aa29.13■■■□□ 2.25
KHSRP-201ENST00000398148 GDPD2Q9HCC8 539 aa29.13■■■□□ 2.25
KHSRP-201ENST00000398148 ADGRB1O14514 1584 aa29.13■■■□□ 2.25
KHSRP-201ENST00000398148 NME9Q86XW9 330 aa29.13■■■□□ 2.25
KHSRP-201ENST00000398148 USP26Q9BXU7 913 aa29.13■■■□□ 2.25
KHSRP-201ENST00000398148 EFCAB6Q5THR3 1501 aa29.12■■■□□ 2.25
KHSRP-201ENST00000398148 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
KHSRP-201ENST00000398148 JARID2Q92833 1246 aaPredicted RBP29.11■■■□□ 2.25
KHSRP-201ENST00000398148 STAG3Q9UJ98 1225 aa29.11■■■□□ 2.25
KHSRP-201ENST00000398148 MROH1Q8NDA8 1641 aa29.11■■■□□ 2.25
KHSRP-201ENST00000398148 TTC22Q5TAA0 569 aa29.1■■■□□ 2.25
KHSRP-201ENST00000398148 NUTM2FA1L443 756 aa29.1■■■□□ 2.25
KHSRP-201ENST00000398148 NRXN1Q9ULB1 1477 aa29.1■■■□□ 2.25
KHSRP-201ENST00000398148 PPP1R9BQ96SB3 815 aa29.1■■■□□ 2.25
KHSRP-201ENST00000398148 RABEP1Q15276 862 aa29.09■■■□□ 2.25
KHSRP-201ENST00000398148 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
KHSRP-201ENST00000398148 TMEM63CQ9P1W3 806 aa29.09■■■□□ 2.25
KHSRP-201ENST00000398148 NSD2O96028 1365 aa29.09■■■□□ 2.25
KHSRP-201ENST00000398148 GNAI1P63096 354 aa29.08■■■□□ 2.25
KHSRP-201ENST00000398148 ZDHHC9Q9Y397 364 aa29.08■■■□□ 2.25
KHSRP-201ENST00000398148 FBXO31Q5XUX0 539 aaPredicted RBP29.08■■■□□ 2.25
KHSRP-201ENST00000398148 MCM10Q7L590 875 aa29.08■■■□□ 2.25
KHSRP-201ENST00000398148 ADGRB2O60241 1585 aa29.08■■■□□ 2.25
KHSRP-201ENST00000398148 MEIS3Q99687 375 aa29.07■■■□□ 2.24
KHSRP-201ENST00000398148 NEK4P51957 841 aa29.07■■■□□ 2.24
KHSRP-201ENST00000398148 AEBP1Q8IUX7 1158 aa29.06■■■□□ 2.24
KHSRP-201ENST00000398148 TPM2P07951 284 aa29.06■■■□□ 2.24
KHSRP-201ENST00000398148 NECTIN2Q92692 538 aa29.06■■■□□ 2.24
KHSRP-201ENST00000398148 F6X3S4 739 aa29.05■■■□□ 2.24
KHSRP-201ENST00000398148 OFD1O75665 1012 aa29.05■■■□□ 2.24
KHSRP-201ENST00000398148 LARP6Q9BRS8 491 aaKnown RBP29.05■■■□□ 2.24
KHSRP-201ENST00000398148 NUCB2P80303 420 aa29.04■■■□□ 2.24
KHSRP-201ENST00000398148 INTS3Q68E01 1043 aaKnown RBP29.04■■■□□ 2.24
KHSRP-201ENST00000398148 ZNF830Q96NB3 372 aaPredicted RBP29.04■■■□□ 2.24
KHSRP-201ENST00000398148 ADGRB3O60242 1522 aa29.04■■■□□ 2.24
KHSRP-201ENST00000398148 GLI2P10070 1586 aa29.03■■■□□ 2.24
KHSRP-201ENST00000398148 TSC1Q92574 1164 aa29.03■■■□□ 2.24
KHSRP-201ENST00000398148 COL3A1P02461 1466 aaPredicted RBP29.03■■■□□ 2.24
KHSRP-201ENST00000398148 PTMAP06454 111 aaKnown RBP29.03■■■□□ 2.24
KHSRP-201ENST00000398148 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.03■■■□□ 2.24
KHSRP-201ENST00000398148 UQCRHLA0A096LP55 91 aa29.02■■■□□ 2.24
KHSRP-201ENST00000398148 UQCRHP07919 91 aa29.02■■■□□ 2.24
KHSRP-201ENST00000398148 ST18O60284 1047 aa29.02■■■□□ 2.24
KHSRP-201ENST00000398148 DCTPP1Q9H773 170 aa29.02■■■□□ 2.24
KHSRP-201ENST00000398148 EXOC6BQ9Y2D4 811 aa29.02■■■□□ 2.24
KHSRP-201ENST00000398148 ABCC4O15439 1325 aa29.02■■■□□ 2.24
KHSRP-201ENST00000398148 MYO3AQ8NEV4 1616 aa29.02■■■□□ 2.24
KHSRP-201ENST00000398148 INO80Q9ULG1 1556 aaPredicted RBP29.01■■■□□ 2.23
KHSRP-201ENST00000398148 PTMSP20962 102 aa29.01■■■□□ 2.23
KHSRP-201ENST00000398148 FAM177BA6PVY3 158 aa29■■■□□ 2.23
KHSRP-201ENST00000398148 UPF3BQ9BZI7 483 aaKnown RBP29■■■□□ 2.23
KHSRP-201ENST00000398148 API5Q9BZZ5 524 aaKnown RBP29■■■□□ 2.23
KHSRP-201ENST00000398148 LRRC7Q96NW7 1537 aa28.99■■■□□ 2.23
KHSRP-201ENST00000398148 PLCB2Q00722 1185 aa28.99■■■□□ 2.23
KHSRP-201ENST00000398148 RILPL2Q969X0 211 aa28.99■■■□□ 2.23
KHSRP-201ENST00000398148 RPGRIP1LQ68CZ1 1315 aa28.99■■■□□ 2.23
KHSRP-201ENST00000398148 CFAP74Q9C0B2 1584 aa28.99■■■□□ 2.23
KHSRP-201ENST00000398148 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.98■■■□□ 2.23
KHSRP-201ENST00000398148 PRDM10Q9NQV6 1147 aa28.98■■■□□ 2.23
KHSRP-201ENST00000398148 IFT57Q9NWB7 429 aa28.98■■■□□ 2.23
KHSRP-201ENST00000398148 PDCL3Q9H2J4 239 aa28.98■■■□□ 2.23
KHSRP-201ENST00000398148 IFT172Q9UG01 1749 aa28.98■■■□□ 2.23
KHSRP-201ENST00000398148 ZNF445P59923 1031 aa28.98■■■□□ 2.23
KHSRP-201ENST00000398148 DNTTIP2Q5QJE6 756 aaKnown RBP28.97■■■□□ 2.23
KHSRP-201ENST00000398148 CEP85Q6P2H3 762 aa28.96■■■□□ 2.23
KHSRP-201ENST00000398148 CASC1Q6TDU7 716 aa28.96■■■□□ 2.23
KHSRP-201ENST00000398148 C17orf53Q8N3J3 647 aaPredicted RBP28.96■■■□□ 2.23
KHSRP-201ENST00000398148 CFAP44Q96MT7 982 aa28.96■■■□□ 2.23
KHSRP-201ENST00000398148 CAMSAP1Q5T5Y3 1602 aa28.96■■■□□ 2.23
KHSRP-201ENST00000398148 SETBP1Q9Y6X0 1596 aa28.96■■■□□ 2.23
KHSRP-201ENST00000398148 CHMP4BQ9H444 224 aaKnown RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms