RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 WDR17Q8IZU2 1322 aa19.58■□□□□ 0.73
SEC13-205ENST00000397101 CENPJQ9HC77 1338 aaPredicted RBP19.58■□□□□ 0.73
SEC13-205ENST00000397101 NLRP6P59044 892 aa19.58■□□□□ 0.72
SEC13-205ENST00000397101 TOM1L2Q6ZVM7 507 aa19.58■□□□□ 0.72
SEC13-205ENST00000397101 PTGER2P43116 358 aa19.56■□□□□ 0.72
SEC13-205ENST00000397101 MARCH10Q8NA82 808 aaPredicted RBP19.56■□□□□ 0.72
SEC13-205ENST00000397101 CABP2Q9NPB3 220 aa19.56■□□□□ 0.72
SEC13-205ENST00000397101 COL18A1P39060 1754 aa19.55■□□□□ 0.72
SEC13-205ENST00000397101 NBPF1Q3BBV0 1214 aa19.55■□□□□ 0.72
SEC13-205ENST00000397101 CARD10Q9BWT7 1032 aa19.54■□□□□ 0.72
SEC13-205ENST00000397101 CABP1Q9NZU7 370 aa19.54■□□□□ 0.72
SEC13-205ENST00000397101 PTF1AQ7RTS3 328 aa19.53■□□□□ 0.72
SEC13-205ENST00000397101 ARHGEF25Q86VW2 580 aa19.53■□□□□ 0.72
SEC13-205ENST00000397101 KCNH5Q8NCM2 988 aa19.53■□□□□ 0.72
SEC13-205ENST00000397101 AXIN2Q9Y2T1 843 aa19.53■□□□□ 0.72
SEC13-205ENST00000397101 WNK3Q9BYP7 1800 aa19.53■□□□□ 0.72
SEC13-205ENST00000397101 CPSF1Q10570 1443 aaKnown RBP19.52■□□□□ 0.72
SEC13-205ENST00000397101 ZBTB7AO95365 584 aa19.52■□□□□ 0.72
SEC13-205ENST00000397101 SLC15A2Q16348 729 aa19.52■□□□□ 0.72
SEC13-205ENST00000397101 TXNRD1Q16881 649 aa19.52■□□□□ 0.72
SEC13-205ENST00000397101 PDGFDQ9GZP0 370 aaPredicted RBP19.52■□□□□ 0.72
SEC13-205ENST00000397101 STK32BQ9NY57 414 aa19.52■□□□□ 0.72
SEC13-205ENST00000397101 ZBTB7CA1YPR0 619 aa19.51■□□□□ 0.71
SEC13-205ENST00000397101 ZNF784Q8NCA9 323 aaPredicted RBP19.51■□□□□ 0.71
SEC13-205ENST00000397101 ZNF692Q9BU19 519 aaPredicted RBP19.51■□□□□ 0.71
SEC13-205ENST00000397101 MTFR1LQ9H019 292 aa19.51■□□□□ 0.71
SEC13-205ENST00000397101 PIK3C2AO00443 1686 aa19.5■□□□□ 0.71
SEC13-205ENST00000397101 SYT17Q9BSW7 474 aa19.5■□□□□ 0.71
SEC13-205ENST00000397101 MYOM1P52179 1685 aa19.49■□□□□ 0.71
SEC13-205ENST00000397101 CCDC7Q96M83 1385 aa19.49■□□□□ 0.71
SEC13-205ENST00000397101 EXOC5O00471 708 aa19.49■□□□□ 0.71
SEC13-205ENST00000397101 SGIP1Q9BQI5 828 aa19.49■□□□□ 0.71
SEC13-205ENST00000397101 ABCC6O95255 1503 aa19.49■□□□□ 0.71
SEC13-205ENST00000397101 AKAP12Q02952 1782 aa19.49■□□□□ 0.71
SEC13-205ENST00000397101 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
SEC13-205ENST00000397101 MAP3K5Q99683 1374 aa19.47■□□□□ 0.71
SEC13-205ENST00000397101 QRICH2Q9H0J4 1663 aa19.47■□□□□ 0.71
SEC13-205ENST00000397101 FHDC1Q9C0D6 1143 aaPredicted RBP19.47■□□□□ 0.71
SEC13-205ENST00000397101 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
SEC13-205ENST00000397101 TTC21BQ7Z4L5 1316 aa19.47■□□□□ 0.71
SEC13-205ENST00000397101 EVC2Q86UK5 1308 aa19.47■□□□□ 0.71
SEC13-205ENST00000397101 TTC21AQ8NDW8 1320 aa19.47■□□□□ 0.71
SEC13-205ENST00000397101 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
SEC13-205ENST00000397101 TNS2Q63HR2 1409 aa19.46■□□□□ 0.71
SEC13-205ENST00000397101 TRPM1Q7Z4N2 1603 aa19.45■□□□□ 0.7
SEC13-205ENST00000397101 CSB-PGBD3P0DP91 1061 aa19.44■□□□□ 0.7
SEC13-205ENST00000397101 SIN3AQ96ST3 1273 aa19.44■□□□□ 0.7
SEC13-205ENST00000397101 GOLGB1Q14789 3259 aaKnown RBP19.43■□□□□ 0.7
SEC13-205ENST00000397101 NFAT5O94916 1531 aa19.43■□□□□ 0.7
SEC13-205ENST00000397101 NHSQ6T4R5 1651 aa19.41■□□□□ 0.7
SEC13-205ENST00000397101 ARXQ96QS3 562 aa19.41■□□□□ 0.7
SEC13-205ENST00000397101 CHD4Q14839 1912 aa19.4■□□□□ 0.7
SEC13-205ENST00000397101 PAPPAQ13219 1627 aa19.4■□□□□ 0.7
SEC13-205ENST00000397101 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
SEC13-205ENST00000397101 ERBB3P21860 1342 aa19.38■□□□□ 0.69
SEC13-205ENST00000397101 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
SEC13-205ENST00000397101 RGPD5Q99666 1765 aa19.38■□□□□ 0.69
SEC13-205ENST00000397101 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
SEC13-205ENST00000397101 SLC16A10Q8TF71 515 aa19.36■□□□□ 0.69
SEC13-205ENST00000397101 SOX12O15370 315 aa19.35■□□□□ 0.69
SEC13-205ENST00000397101 IL2RBP14784 551 aa19.35■□□□□ 0.69
SEC13-205ENST00000397101 KTN1Q86UP2 1357 aaKnown RBP19.34■□□□□ 0.69
SEC13-205ENST00000397101 SENP3-EIF4A1A0A087X0R7 540 aa19.34■□□□□ 0.69
SEC13-205ENST00000397101 USP54Q70EL1 1684 aa19.33■□□□□ 0.69
SEC13-205ENST00000397101 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
SEC13-205ENST00000397101 SLC27A3Q5K4L6 730 aa19.33■□□□□ 0.68
SEC13-205ENST00000397101 ACSBG1Q96GR2 724 aa19.33■□□□□ 0.68
SEC13-205ENST00000397101 ZNF827Q17R98 1081 aa19.32■□□□□ 0.68
SEC13-205ENST00000397101 L3MBTL2Q969R5 705 aa19.32■□□□□ 0.68
SEC13-205ENST00000397101 AKT1S1Q96B36 256 aa19.31■□□□□ 0.68
SEC13-205ENST00000397101 LRRC4BQ9NT99 713 aa19.31■□□□□ 0.68
SEC13-205ENST00000397101 NLRP2Q9NX02 1062 aa19.31■□□□□ 0.68
SEC13-205ENST00000397101 SBNO2Q9Y2G9 1366 aa19.31■□□□□ 0.68
SEC13-205ENST00000397101 MON2Q7Z3U7 1717 aa19.3■□□□□ 0.68
SEC13-205ENST00000397101 BTAF1O14981 1849 aa19.3■□□□□ 0.68
SEC13-205ENST00000397101 COL24A1Q17RW2 1714 aa19.29■□□□□ 0.68
SEC13-205ENST00000397101 QSER1Q2KHR3 1735 aa19.29■□□□□ 0.68
SEC13-205ENST00000397101 GPR162Q16538 588 aa19.29■□□□□ 0.68
SEC13-205ENST00000397101 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
SEC13-205ENST00000397101 CEP350Q5VT06 3117 aa19.28■□□□□ 0.68
SEC13-205ENST00000397101 POLD1P28340 1107 aa19.28■□□□□ 0.68
SEC13-205ENST00000397101 ANKRD24Q8TF21 1146 aa19.27■□□□□ 0.68
SEC13-205ENST00000397101 CD163L1Q9NR16 1453 aa19.25■□□□□ 0.67
SEC13-205ENST00000397101 GIGYF1O75420 1035 aaPredicted RBP19.25■□□□□ 0.67
SEC13-205ENST00000397101 TIMELESSQ9UNS1 1208 aa19.25■□□□□ 0.67
SEC13-205ENST00000397101 PNPLA7Q6ZV29 1317 aa19.25■□□□□ 0.67
SEC13-205ENST00000397101 NME9Q86XW9 330 aa19.24■□□□□ 0.67
SEC13-205ENST00000397101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.24■□□□□ 0.67
SEC13-205ENST00000397101 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
SEC13-205ENST00000397101 LTN1O94822 1766 aa19.22■□□□□ 0.67
SEC13-205ENST00000397101 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
SEC13-205ENST00000397101 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
SEC13-205ENST00000397101 IP6K1Q92551 441 aa19.21■□□□□ 0.67
SEC13-205ENST00000397101 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
SEC13-205ENST00000397101 TFCP2L1Q9NZI6 479 aa19.21■□□□□ 0.67
SEC13-205ENST00000397101 GRIN3BO60391 1043 aa19.2■□□□□ 0.66
SEC13-205ENST00000397101 IFFO2Q5TF58 517 aa19.2■□□□□ 0.66
SEC13-205ENST00000397101 FAM208AQ9UK61 1670 aaKnown RBP19.19■□□□□ 0.66
SEC13-205ENST00000397101 DDX54Q8TDD1 881 aaKnown RBP19.18■□□□□ 0.66
SEC13-205ENST00000397101 SHANK3Q9BYB0 1731 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms