RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
GAPDH-202ENST00000396856 THRAP3Q9Y2W1 955 aaKnown RBP17.16■□□□□ 0.34
GAPDH-202ENST00000396856 EVA1CP58658 441 aa17.15■□□□□ 0.34
GAPDH-202ENST00000396856 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
GAPDH-202ENST00000396856 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
GAPDH-202ENST00000396856 LMO7Q8WWI1 1683 aa17.14■□□□□ 0.33
GAPDH-202ENST00000396856 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
GAPDH-202ENST00000396856 GCP02774 474 aa17.14■□□□□ 0.33
GAPDH-202ENST00000396856 SGIP1Q9BQI5 828 aa17.14■□□□□ 0.33
GAPDH-202ENST00000396856 MYOM1P52179 1685 aa17.13■□□□□ 0.33
GAPDH-202ENST00000396856 PARP4Q9UKK3 1724 aaKnown RBP17.13■□□□□ 0.33
GAPDH-202ENST00000396856 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
GAPDH-202ENST00000396856 NLRP6P59044 892 aa17.12■□□□□ 0.33
GAPDH-202ENST00000396856 FHDC1Q9C0D6 1143 aaPredicted RBP17.11■□□□□ 0.33
GAPDH-202ENST00000396856 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
GAPDH-202ENST00000396856 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
GAPDH-202ENST00000396856 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
GAPDH-202ENST00000396856 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
GAPDH-202ENST00000396856 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
GAPDH-202ENST00000396856 TTC21BQ7Z4L5 1316 aa17.09■□□□□ 0.33
GAPDH-202ENST00000396856 OVOS2A0A0G2JMS6 1433 aa17.09■□□□□ 0.33
GAPDH-202ENST00000396856 OVOS2A0A0J9YW53 1432 aa17.09■□□□□ 0.33
GAPDH-202ENST00000396856 CPSF1Q10570 1443 aaKnown RBP17.09■□□□□ 0.33
GAPDH-202ENST00000396856 OVOS2Q6IE36 1432 aa17.09■□□□□ 0.33
GAPDH-202ENST00000396856 SLIT3O75094 1523 aa17.09■□□□□ 0.33
GAPDH-202ENST00000396856 CHD4Q14839 1912 aa17.09■□□□□ 0.33
GAPDH-202ENST00000396856 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
GAPDH-202ENST00000396856 COL5A2P05997 1499 aaPredicted RBP17.07■□□□□ 0.32
GAPDH-202ENST00000396856 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
GAPDH-202ENST00000396856 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
GAPDH-202ENST00000396856 KCNH5Q8NCM2 988 aa17.07■□□□□ 0.32
GAPDH-202ENST00000396856 BCL9O00512 1426 aa17.06■□□□□ 0.32
GAPDH-202ENST00000396856 AATKQ6ZMQ8 1374 aa17.06■□□□□ 0.32
GAPDH-202ENST00000396856 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
GAPDH-202ENST00000396856 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
GAPDH-202ENST00000396856 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
GAPDH-202ENST00000396856 MARCH10Q8NA82 808 aaPredicted RBP17.05■□□□□ 0.32
GAPDH-202ENST00000396856 CRB1P82279 1406 aa17.04■□□□□ 0.32
GAPDH-202ENST00000396856 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
GAPDH-202ENST00000396856 LRRC37A3O60309 1634 aa17.03■□□□□ 0.32
GAPDH-202ENST00000396856 ZBTB7CA1YPR0 619 aa17.03■□□□□ 0.32
GAPDH-202ENST00000396856 TXNRD1Q16881 649 aa17.03■□□□□ 0.32
GAPDH-202ENST00000396856 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
GAPDH-202ENST00000396856 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
GAPDH-202ENST00000396856 MON2Q7Z3U7 1717 aa17.02■□□□□ 0.32
GAPDH-202ENST00000396856 DDB1Q16531 1140 aa17.02■□□□□ 0.32
GAPDH-202ENST00000396856 TMC1Q8TDI8 760 aa17.02■□□□□ 0.32
GAPDH-202ENST00000396856 ARHGEF25Q86VW2 580 aa17.01■□□□□ 0.31
GAPDH-202ENST00000396856 TERF2IPQ9NYB0 399 aa17.01■□□□□ 0.31
GAPDH-202ENST00000396856 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
GAPDH-202ENST00000396856 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
GAPDH-202ENST00000396856 STK32BQ9NY57 414 aa17■□□□□ 0.31
GAPDH-202ENST00000396856 USP31Q70CQ4 1352 aa17■□□□□ 0.31
GAPDH-202ENST00000396856 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
GAPDH-202ENST00000396856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.31
GAPDH-202ENST00000396856 ARXQ96QS3 562 aa16.99■□□□□ 0.31
GAPDH-202ENST00000396856 TESK2Q96S53 571 aa16.99■□□□□ 0.31
GAPDH-202ENST00000396856 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
GAPDH-202ENST00000396856 WDR17Q8IZU2 1322 aa16.98■□□□□ 0.31
GAPDH-202ENST00000396856 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
GAPDH-202ENST00000396856 ABCC6O95255 1503 aa16.98■□□□□ 0.31
GAPDH-202ENST00000396856 TOM1L2Q6ZVM7 507 aa16.98■□□□□ 0.31
GAPDH-202ENST00000396856 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
GAPDH-202ENST00000396856 COL18A1P39060 1754 aa16.97■□□□□ 0.31
GAPDH-202ENST00000396856 NFAT5O94916 1531 aa16.97■□□□□ 0.31
GAPDH-202ENST00000396856 SOX12O15370 315 aa16.97■□□□□ 0.31
GAPDH-202ENST00000396856 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
GAPDH-202ENST00000396856 AXIN2Q9Y2T1 843 aa16.97■□□□□ 0.31
GAPDH-202ENST00000396856 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
GAPDH-202ENST00000396856 USP54Q70EL1 1684 aa16.96■□□□□ 0.31
GAPDH-202ENST00000396856 NME9Q86XW9 330 aa16.95■□□□□ 0.3
GAPDH-202ENST00000396856 CDCA7Q9BWT1 371 aaPredicted RBP16.95■□□□□ 0.3
GAPDH-202ENST00000396856 USP47Q96K76 1375 aa16.94■□□□□ 0.3
GAPDH-202ENST00000396856 CSB-PGBD3P0DP91 1061 aa16.94■□□□□ 0.3
GAPDH-202ENST00000396856 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
GAPDH-202ENST00000396856 TMF1P82094 1093 aa16.93■□□□□ 0.3
GAPDH-202ENST00000396856 CARD10Q9BWT7 1032 aa16.93■□□□□ 0.3
GAPDH-202ENST00000396856 GPR162Q16538 588 aa16.92■□□□□ 0.3
GAPDH-202ENST00000396856 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
GAPDH-202ENST00000396856 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
GAPDH-202ENST00000396856 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
GAPDH-202ENST00000396856 CCDC7Q96M83 1385 aa16.9■□□□□ 0.3
GAPDH-202ENST00000396856 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
GAPDH-202ENST00000396856 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.3
GAPDH-202ENST00000396856 ZNF827Q17R98 1081 aa16.89■□□□□ 0.29
GAPDH-202ENST00000396856 ERBB3P21860 1342 aa16.89■□□□□ 0.29
GAPDH-202ENST00000396856 COL24A1Q17RW2 1714 aa16.88■□□□□ 0.29
GAPDH-202ENST00000396856 EXOC5O00471 708 aa16.88■□□□□ 0.29
GAPDH-202ENST00000396856 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
GAPDH-202ENST00000396856 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
GAPDH-202ENST00000396856 COG3Q96JB2 828 aa16.87■□□□□ 0.29
GAPDH-202ENST00000396856 LTN1O94822 1766 aa16.85■□□□□ 0.29
GAPDH-202ENST00000396856 NLGN2Q8NFZ4 835 aa16.85■□□□□ 0.29
GAPDH-202ENST00000396856 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
GAPDH-202ENST00000396856 NLRP2Q9NX02 1062 aa16.85■□□□□ 0.29
GAPDH-202ENST00000396856 YBX3P16989 372 aaKnown RBP eCLIP16.84■□□□□ 0.291e-62■■□□□ 11.9
GAPDH-202ENST00000396856 ANKRD24Q8TF21 1146 aa16.84■□□□□ 0.29
GAPDH-202ENST00000396856 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
GAPDH-202ENST00000396856 NHSQ6T4R5 1651 aa16.84■□□□□ 0.29
GAPDH-202ENST00000396856 TNS2Q63HR2 1409 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms