RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 MAP4K5Q9Y4K4 846 aa8.52□□□□□ -1.05
CMC1-202ENST00000396610 J3QL48 77 aa8.51□□□□□ -1.05
CMC1-202ENST00000396610 ADH1CP00326 375 aa8.51□□□□□ -1.05
CMC1-202ENST00000396610 VASH1Q7L8A9 365 aaPredicted RBP8.51□□□□□ -1.05
CMC1-202ENST00000396610 ADAMTS19Q8TE59 1207 aa8.51□□□□□ -1.05
CMC1-202ENST00000396610 CDK15Q96Q40 435 aa8.51□□□□□ -1.05
CMC1-202ENST00000396610 NBPF20Q3BBV1 942 aa8.5□□□□□ -1.05
CMC1-202ENST00000396610 SMPD1P17405 629 aa8.49□□□□□ -1.05
CMC1-202ENST00000396610 ERICH6Q7L0X2 663 aa8.49□□□□□ -1.05
CMC1-202ENST00000396610 MPNDQ8N594 471 aa8.49□□□□□ -1.05
CMC1-202ENST00000396610 KCTD15Q96SI1 283 aaPredicted RBP8.49□□□□□ -1.05
CMC1-202ENST00000396610 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
CMC1-202ENST00000396610 NR3C2P08235 984 aa8.48□□□□□ -1.05
CMC1-202ENST00000396610 SOX11P35716 441 aa8.48□□□□□ -1.05
CMC1-202ENST00000396610 RAB15P59190 212 aa8.48□□□□□ -1.05
CMC1-202ENST00000396610 SEMA3FQ13275 785 aa8.48□□□□□ -1.05
CMC1-202ENST00000396610 INTS6LQ5JSJ4 861 aaKnown RBP8.48□□□□□ -1.05
CMC1-202ENST00000396610 GLMNQ92990 594 aa8.48□□□□□ -1.05
CMC1-202ENST00000396610 AAASQ9NRG9 546 aa8.48□□□□□ -1.05
CMC1-202ENST00000396610 ZNF777Q9ULD5 760 aaPredicted RBP8.48□□□□□ -1.05
CMC1-202ENST00000396610 WASF2Q9Y6W5 498 aa8.48□□□□□ -1.05
CMC1-202ENST00000396610 GRM5P41594 1212 aa8.47□□□□□ -1.05
CMC1-202ENST00000396610 NNTQ13423 1086 aa8.47□□□□□ -1.05
CMC1-202ENST00000396610 ZNF592Q92610 1267 aa8.47□□□□□ -1.05
CMC1-202ENST00000396610 ALG2Q9H553 416 aa8.47□□□□□ -1.05
CMC1-202ENST00000396610 ESPNB1AK53 854 aa8.46□□□□□ -1.06
CMC1-202ENST00000396610 GIGYF1O75420 1035 aaPredicted RBP8.46□□□□□ -1.06
CMC1-202ENST00000396610 CRIPAKQ8N1N5 446 aa8.46□□□□□ -1.06
CMC1-202ENST00000396610 ARID3CA6NKF2 412 aa8.45□□□□□ -1.06
CMC1-202ENST00000396610 POTECB2RU33 542 aa8.45□□□□□ -1.06
CMC1-202ENST00000396610 ST8SIA5O15466 376 aa8.45□□□□□ -1.06
CMC1-202ENST00000396610 MCCD1P59942 119 aaPredicted RBP8.45□□□□□ -1.06
CMC1-202ENST00000396610 HDGFL1Q5TGJ6 251 aa8.45□□□□□ -1.06
CMC1-202ENST00000396610 CEP126Q9P2H0 1117 aa8.45□□□□□ -1.06
CMC1-202ENST00000396610 PIK3CDO00329 1044 aa8.44□□□□□ -1.06
CMC1-202ENST00000396610 AVPP01185 164 aa8.44□□□□□ -1.06
CMC1-202ENST00000396610 NR5A1Q13285 461 aa8.44□□□□□ -1.06
CMC1-202ENST00000396610 CTC1Q2NKJ3 1217 aa8.44□□□□□ -1.06
CMC1-202ENST00000396610 HPS1Q92902 700 aa8.44□□□□□ -1.06
CMC1-202ENST00000396610 UCN2Q96RP3 112 aa8.44□□□□□ -1.06
CMC1-202ENST00000396610 CCDC116Q8IYX3 515 aa8.43□□□□□ -1.06
CMC1-202ENST00000396610 CALR3Q96L12 384 aaKnown RBP8.43□□□□□ -1.06
CMC1-202ENST00000396610 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
CMC1-202ENST00000396610 PPP1R26Q5T8A7 1209 aaPredicted RBP8.42□□□□□ -1.06
CMC1-202ENST00000396610 RNF135Q8IUD6 432 aa8.42□□□□□ -1.06
CMC1-202ENST00000396610 SEPT12Q8IYM1 358 aa8.42□□□□□ -1.06
CMC1-202ENST00000396610 ERVH48-1M5A8F1 160 aa8.41□□□□□ -1.06
CMC1-202ENST00000396610 AXIN1O15169 862 aa8.41□□□□□ -1.06
CMC1-202ENST00000396610 CCDC85AQ96PX6 553 aaPredicted RBP8.41□□□□□ -1.06
CMC1-202ENST00000396610 C1orf115Q9H7X2 142 aa8.41□□□□□ -1.06
CMC1-202ENST00000396610 SUPT5HO00267 1087 aaKnown RBP8.4□□□□□ -1.06
CMC1-202ENST00000396610 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
CMC1-202ENST00000396610 WDR4P57081 412 aaKnown RBP8.4□□□□□ -1.06
CMC1-202ENST00000396610 PHTF2Q8N3S3 785 aa8.4□□□□□ -1.06
CMC1-202ENST00000396610 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
CMC1-202ENST00000396610 PCDHB11Q9Y5F2 797 aa8.4□□□□□ -1.06
CMC1-202ENST00000396610 TIMP2P16035 220 aa8.39□□□□□ -1.07
CMC1-202ENST00000396610 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
CMC1-202ENST00000396610 RNF20Q5VTR2 975 aa8.39□□□□□ -1.07
CMC1-202ENST00000396610 TREML4Q6UXN2 200 aa8.39□□□□□ -1.07
CMC1-202ENST00000396610 ZNF784Q8NCA9 323 aaPredicted RBP8.39□□□□□ -1.07
CMC1-202ENST00000396610 ITPKCQ96DU7 683 aa8.39□□□□□ -1.07
CMC1-202ENST00000396610 KLF16Q9BXK1 252 aaPredicted RBP8.39□□□□□ -1.07
CMC1-202ENST00000396610 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
CMC1-202ENST00000396610 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
CMC1-202ENST00000396610 SKIP12755 728 aa8.38□□□□□ -1.07
CMC1-202ENST00000396610 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
CMC1-202ENST00000396610 TBC1D9Q6ZT07 1266 aa8.38□□□□□ -1.07
CMC1-202ENST00000396610 CYLDQ9NQC7 956 aa8.38□□□□□ -1.07
CMC1-202ENST00000396610 DOLKQ9UPQ8 538 aa8.38□□□□□ -1.07
CMC1-202ENST00000396610 EMILIN1Q9Y6C2 1016 aa8.38□□□□□ -1.07
CMC1-202ENST00000396610 PLPP7Q8NBV4 271 aa8.37□□□□□ -1.07
CMC1-202ENST00000396610 CDCA7Q9BWT1 371 aaPredicted RBP8.37□□□□□ -1.07
CMC1-202ENST00000396610 USP17L5A8MUK1 530 aa8.36□□□□□ -1.07
CMC1-202ENST00000396610 C11orf95C9JLR9 678 aaPredicted RBP8.36□□□□□ -1.07
CMC1-202ENST00000396610 SCTRP47872 440 aa8.36□□□□□ -1.07
CMC1-202ENST00000396610 OXLD1Q5BKU9 147 aa8.36□□□□□ -1.07
CMC1-202ENST00000396610 NFATC2IPQ8NCF5 419 aa8.36□□□□□ -1.07
CMC1-202ENST00000396610 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
CMC1-202ENST00000396610 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
CMC1-202ENST00000396610 DEPDC4Q8N2C3 294 aa8.35□□□□□ -1.07
CMC1-202ENST00000396610 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
CMC1-202ENST00000396610 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
CMC1-202ENST00000396610 CAPN5O15484 640 aaPredicted RBP8.34□□□□□ -1.07
CMC1-202ENST00000396610 ATP9BO43861 1147 aa8.34□□□□□ -1.07
CMC1-202ENST00000396610 LILRA1O75019 489 aa8.34□□□□□ -1.07
CMC1-202ENST00000396610 CBLBQ13191 982 aa8.34□□□□□ -1.07
CMC1-202ENST00000396610 PPP1R12CQ9BZL4 782 aa8.34□□□□□ -1.07
CMC1-202ENST00000396610 GMPR2Q9P2T1 348 aaKnown RBP8.34□□□□□ -1.07
CMC1-202ENST00000396610 DACH1Q9UI36 760 aa8.34□□□□□ -1.07
CMC1-202ENST00000396610 USP17L3A6NCW0 530 aa8.33□□□□□ -1.08
CMC1-202ENST00000396610 USP17L4A6NCW7 530 aa8.33□□□□□ -1.08
CMC1-202ENST00000396610 ERVK-9P63128 1117 aa8.33□□□□□ -1.08
CMC1-202ENST00000396610 NCOA4Q13772 614 aa8.33□□□□□ -1.08
CMC1-202ENST00000396610 MAP7D1Q3KQU3 841 aa8.33□□□□□ -1.08
CMC1-202ENST00000396610 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
CMC1-202ENST00000396610 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
CMC1-202ENST00000396610 USP17L1Q7RTZ2 530 aa8.33□□□□□ -1.08
CMC1-202ENST00000396610 CCDC125Q86Z20 511 aa8.33□□□□□ -1.08
CMC1-202ENST00000396610 CCDC97Q96F63 343 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms