RNA–Protein interactions for RNA: ENST00000396265.4

TSPO-203, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPO, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-203ENST00000396265 AATKQ6ZMQ8 1374 aa20.42■□□□□ 0.86
TSPO-203ENST00000396265 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
TSPO-203ENST00000396265 C11orf95C9JLR9 678 aaPredicted RBP20.4■□□□□ 0.86
TSPO-203ENST00000396265 AXIN2Q9Y2T1 843 aa20.4■□□□□ 0.86
TSPO-203ENST00000396265 PLSCR1O15162 318 aa20.39■□□□□ 0.85
TSPO-203ENST00000396265 MARCH10Q8NA82 808 aaPredicted RBP20.38■□□□□ 0.85
TSPO-203ENST00000396265 PDGFDQ9GZP0 370 aaPredicted RBP20.38■□□□□ 0.85
TSPO-203ENST00000396265 NINLQ9Y2I6 1382 aa20.37■□□□□ 0.85
TSPO-203ENST00000396265 WDR17Q8IZU2 1322 aa20.37■□□□□ 0.85
TSPO-203ENST00000396265 SOX12O15370 315 aa20.37■□□□□ 0.85
TSPO-203ENST00000396265 BCL11BQ9C0K0 894 aaPredicted RBP20.37■□□□□ 0.85
TSPO-203ENST00000396265 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
TSPO-203ENST00000396265 MYOM1P52179 1685 aa20.36■□□□□ 0.85
TSPO-203ENST00000396265 PROM2Q8N271 834 aa20.36■□□□□ 0.85
TSPO-203ENST00000396265 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
TSPO-203ENST00000396265 UTRNP46939 3433 aa20.34■□□□□ 0.85
TSPO-203ENST00000396265 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
TSPO-203ENST00000396265 ZBTB7AO95365 584 aa20.33■□□□□ 0.85
TSPO-203ENST00000396265 ARHGEF25Q86VW2 580 aa20.33■□□□□ 0.85
TSPO-203ENST00000396265 TTC21BQ7Z4L5 1316 aa20.32■□□□□ 0.84
TSPO-203ENST00000396265 EVC2Q86UK5 1308 aa20.32■□□□□ 0.84
TSPO-203ENST00000396265 CSB-PGBD3P0DP91 1061 aa20.32■□□□□ 0.84
TSPO-203ENST00000396265 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
TSPO-203ENST00000396265 CDCA7Q9BWT1 371 aaPredicted RBP20.3■□□□□ 0.84
TSPO-203ENST00000396265 CARD10Q9BWT7 1032 aa20.3■□□□□ 0.84
TSPO-203ENST00000396265 ATF5Q9Y2D1 282 aaPredicted RBP20.3■□□□□ 0.84
TSPO-203ENST00000396265 NFAT5O94916 1531 aa20.3■□□□□ 0.84
TSPO-203ENST00000396265 BCL9O00512 1426 aa20.29■□□□□ 0.84
TSPO-203ENST00000396265 TXNRD1Q16881 649 aa20.29■□□□□ 0.84
TSPO-203ENST00000396265 L3MBTL2Q969R5 705 aa20.29■□□□□ 0.84
TSPO-203ENST00000396265 PTGER2P43116 358 aa20.28■□□□□ 0.84
TSPO-203ENST00000396265 KCNH5Q8NCM2 988 aa20.28■□□□□ 0.84
TSPO-203ENST00000396265 MON2Q7Z3U7 1717 aa20.27■□□□□ 0.84
TSPO-203ENST00000396265 NHSQ6T4R5 1651 aa20.27■□□□□ 0.84
TSPO-203ENST00000396265 EXOC5O00471 708 aa20.27■□□□□ 0.84
TSPO-203ENST00000396265 STK32BQ9NY57 414 aa20.27■□□□□ 0.84
TSPO-203ENST00000396265 LTN1O94822 1766 aa20.26■□□□□ 0.83
TSPO-203ENST00000396265 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
TSPO-203ENST00000396265 TNS2Q63HR2 1409 aa20.26■□□□□ 0.83
TSPO-203ENST00000396265 TTC21AQ8NDW8 1320 aa20.26■□□□□ 0.83
TSPO-203ENST00000396265 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
TSPO-203ENST00000396265 SLC15A2Q16348 729 aa20.25■□□□□ 0.83
TSPO-203ENST00000396265 ROCK2O75116 1388 aaKnown RBP20.24■□□□□ 0.83
TSPO-203ENST00000396265 KTN1Q86UP2 1357 aaKnown RBP20.24■□□□□ 0.83
TSPO-203ENST00000396265 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
TSPO-203ENST00000396265 CHD4Q14839 1912 aa20.23■□□□□ 0.83
TSPO-203ENST00000396265 CCDC7Q96M83 1385 aa20.23■□□□□ 0.83
TSPO-203ENST00000396265 BTAF1O14981 1849 aa20.23■□□□□ 0.83
TSPO-203ENST00000396265 SIN3AQ96ST3 1273 aa20.23■□□□□ 0.83
TSPO-203ENST00000396265 ABCC6O95255 1503 aa20.22■□□□□ 0.83
TSPO-203ENST00000396265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.21■□□□□ 0.83
TSPO-203ENST00000396265 FHDC1Q9C0D6 1143 aaPredicted RBP20.21■□□□□ 0.83
TSPO-203ENST00000396265 USP54Q70EL1 1684 aa20.21■□□□□ 0.83
TSPO-203ENST00000396265 PAPPAQ13219 1627 aa20.2■□□□□ 0.82
TSPO-203ENST00000396265 SYT17Q9BSW7 474 aa20.19■□□□□ 0.82
TSPO-203ENST00000396265 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
TSPO-203ENST00000396265 MTFR1LQ9H019 292 aa20.18■□□□□ 0.82
TSPO-203ENST00000396265 NLRP2Q9NX02 1062 aa20.18■□□□□ 0.82
TSPO-203ENST00000396265 NME9Q86XW9 330 aa20.17■□□□□ 0.82
TSPO-203ENST00000396265 ZNF784Q8NCA9 323 aaPredicted RBP20.17■□□□□ 0.82
TSPO-203ENST00000396265 SGIP1Q9BQI5 828 aa20.17■□□□□ 0.82
TSPO-203ENST00000396265 ERBB3P21860 1342 aa20.17■□□□□ 0.82
TSPO-203ENST00000396265 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
TSPO-203ENST00000396265 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
TSPO-203ENST00000396265 IL2RBP14784 551 aa20.14■□□□□ 0.81
TSPO-203ENST00000396265 ZNF827Q17R98 1081 aa20.14■□□□□ 0.81
TSPO-203ENST00000396265 SBNO2Q9Y2G9 1366 aa20.13■□□□□ 0.81
TSPO-203ENST00000396265 ANKRD24Q8TF21 1146 aa20.13■□□□□ 0.81
TSPO-203ENST00000396265 TUBGCP6Q96RT7 1819 aa20.13■□□□□ 0.81
TSPO-203ENST00000396265 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
TSPO-203ENST00000396265 ARXQ96QS3 562 aa20.11■□□□□ 0.81
TSPO-203ENST00000396265 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
TSPO-203ENST00000396265 GOLGB1Q14789 3259 aaKnown RBP20.1■□□□□ 0.81
TSPO-203ENST00000396265 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
TSPO-203ENST00000396265 RGPD2P0DJD1 1756 aa20.09■□□□□ 0.81
TSPO-203ENST00000396265 SLC12A5Q9H2X9 1139 aa20.09■□□□□ 0.81
TSPO-203ENST00000396265 HDGFL2Q7Z4V5 671 aaPredicted RBP20.07■□□□□ 0.8
TSPO-203ENST00000396265 DOT1LQ8TEK3 1739 aa20.07■□□□□ 0.8
TSPO-203ENST00000396265 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
TSPO-203ENST00000396265 EDC4Q6P2E9 1401 aaKnown RBP20.06■□□□□ 0.8
TSPO-203ENST00000396265 KLHL34Q8N239 644 aa20.06■□□□□ 0.8
TSPO-203ENST00000396265 DDX54Q8TDD1 881 aaKnown RBP20.06■□□□□ 0.8
TSPO-203ENST00000396265 LTV1Q96GA3 475 aaPredicted RBP20.06■□□□□ 0.8
TSPO-203ENST00000396265 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
TSPO-203ENST00000396265 KCNQ4P56696 695 aa20.05■□□□□ 0.8
TSPO-203ENST00000396265 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
TSPO-203ENST00000396265 A0A1W2PP64 1363 aa20.05■□□□□ 0.8
TSPO-203ENST00000396265 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
TSPO-203ENST00000396265 SHANK3Q9BYB0 1731 aa20.05■□□□□ 0.8
TSPO-203ENST00000396265 AKT1S1Q96B36 256 aa20.04■□□□□ 0.8
TSPO-203ENST00000396265 LY75O60449 1722 aa20.03■□□□□ 0.8
TSPO-203ENST00000396265 GPR162Q16538 588 aa20.02■□□□□ 0.8
TSPO-203ENST00000396265 IP6K1Q92551 441 aa20.02■□□□□ 0.8
TSPO-203ENST00000396265 SYTL4Q96C24 671 aaPredicted RBP20.02■□□□□ 0.8
TSPO-203ENST00000396265 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.79
TSPO-203ENST00000396265 SENP3-EIF4A1A0A087X0R7 540 aa20.01■□□□□ 0.79
TSPO-203ENST00000396265 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
TSPO-203ENST00000396265 PELP1Q8IZL8 1130 aaKnown RBP20■□□□□ 0.79
TSPO-203ENST00000396265 TERF2IPQ9NYB0 399 aa20■□□□□ 0.79
TSPO-203ENST00000396265 FBLN1P23142 703 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms