RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.26
CXCL12-206ENST00000395795 EDC4Q6P2E9 1401 aaKnown RBP22.91■■□□□ 1.26
CXCL12-206ENST00000395795 WDR17Q8IZU2 1322 aa22.9■■□□□ 1.26
CXCL12-206ENST00000395795 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
CXCL12-206ENST00000395795 PEAK1Q9H792 1746 aa22.9■■□□□ 1.26
CXCL12-206ENST00000395795 SOX12O15370 315 aa22.89■■□□□ 1.25
CXCL12-206ENST00000395795 BAG6P46379 1132 aa22.89■■□□□ 1.25
CXCL12-206ENST00000395795 OVOS2A0A0J9YW53 1432 aa22.89■■□□□ 1.25
CXCL12-206ENST00000395795 OVOS2Q6IE36 1432 aa22.89■■□□□ 1.25
CXCL12-206ENST00000395795 ABCC6O95255 1503 aa22.88■■□□□ 1.25
CXCL12-206ENST00000395795 TRIM37O94972 964 aa22.88■■□□□ 1.25
CXCL12-206ENST00000395795 LRRC37A3O60309 1634 aa22.88■■□□□ 1.25
CXCL12-206ENST00000395795 CAMKK2Q96RR4 588 aa22.87■■□□□ 1.25
CXCL12-206ENST00000395795 WNK3Q9BYP7 1800 aa22.86■■□□□ 1.25
CXCL12-206ENST00000395795 USP47Q96K76 1375 aa22.86■■□□□ 1.25
CXCL12-206ENST00000395795 PDE3BQ13370 1112 aa22.85■■□□□ 1.25
CXCL12-206ENST00000395795 TOM1L2Q6ZVM7 507 aa22.85■■□□□ 1.25
CXCL12-206ENST00000395795 HDGFL2Q7Z4V5 671 aaPredicted RBP22.85■■□□□ 1.25
CXCL12-206ENST00000395795 EZH2Q15910 746 aaKnown RBP22.84■■□□□ 1.25
CXCL12-206ENST00000395795 TERF2IPQ9NYB0 399 aa22.84■■□□□ 1.25
CXCL12-206ENST00000395795 NINLQ9Y2I6 1382 aa22.84■■□□□ 1.25
CXCL12-206ENST00000395795 CARD10Q9BWT7 1032 aa22.83■■□□□ 1.25
CXCL12-206ENST00000395795 CLSPNQ9HAW4 1339 aa22.81■■□□□ 1.24
CXCL12-206ENST00000395795 TIMELESSQ9UNS1 1208 aa22.8■■□□□ 1.24
CXCL12-206ENST00000395795 ERBB3P21860 1342 aa22.8■■□□□ 1.24
CXCL12-206ENST00000395795 LTN1O94822 1766 aa22.79■■□□□ 1.24
CXCL12-206ENST00000395795 PTF1AQ7RTS3 328 aa22.79■■□□□ 1.24
CXCL12-206ENST00000395795 MARCH10Q8NA82 808 aaPredicted RBP22.79■■□□□ 1.24
CXCL12-206ENST00000395795 ANKRD36BQ8N2N9 1353 aa22.78■■□□□ 1.24
CXCL12-206ENST00000395795 RREB1Q92766 1687 aa22.78■■□□□ 1.24
CXCL12-206ENST00000395795 OVOS2A0A0G2JMS6 1433 aa22.78■■□□□ 1.24
CXCL12-206ENST00000395795 PSDA5PKW4 1024 aaPredicted RBP22.78■■□□□ 1.24
CXCL12-206ENST00000395795 BCL9O00512 1426 aa22.78■■□□□ 1.24
CXCL12-206ENST00000395795 APBA3O96018 575 aa22.78■■□□□ 1.24
CXCL12-206ENST00000395795 DDB1Q16531 1140 aa22.77■■□□□ 1.24
CXCL12-206ENST00000395795 SBF2Q86WG5 1849 aa22.77■■□□□ 1.24
CXCL12-206ENST00000395795 SLC24A1O60721 1099 aa22.76■■□□□ 1.23
CXCL12-206ENST00000395795 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
CXCL12-206ENST00000395795 PARD3Q8TEW0 1356 aa22.76■■□□□ 1.23
CXCL12-206ENST00000395795 CCDC7Q96M83 1385 aa22.76■■□□□ 1.23
CXCL12-206ENST00000395795 FBLN1P23142 703 aa22.75■■□□□ 1.23
CXCL12-206ENST00000395795 CDCA7Q9BWT1 371 aaPredicted RBP22.75■■□□□ 1.23
CXCL12-206ENST00000395795 CSB-PGBD3P0DP91 1061 aa22.74■■□□□ 1.23
CXCL12-206ENST00000395795 TMF1P82094 1093 aa22.74■■□□□ 1.23
CXCL12-206ENST00000395795 LRP5O75197 1615 aa22.74■■□□□ 1.23
CXCL12-206ENST00000395795 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
CXCL12-206ENST00000395795 R3HDM1Q15032 1099 aaKnown RBP22.72■■□□□ 1.23
CXCL12-206ENST00000395795 MYOM1P52179 1685 aa22.71■■□□□ 1.23
CXCL12-206ENST00000395795 C11orf95C9JLR9 678 aaPredicted RBP22.71■■□□□ 1.23
CXCL12-206ENST00000395795 FYB1O15117 783 aa22.71■■□□□ 1.23
CXCL12-206ENST00000395795 ANKRD24Q8TF21 1146 aa22.71■■□□□ 1.23
CXCL12-206ENST00000395795 IP6K1Q92551 441 aa22.71■■□□□ 1.23
CXCL12-206ENST00000395795 MAP3K19Q56UN5 1328 aa22.71■■□□□ 1.23
CXCL12-206ENST00000395795 TNS2Q63HR2 1409 aa22.71■■□□□ 1.23
CXCL12-206ENST00000395795 CARD14Q9BXL6 1004 aa22.69■■□□□ 1.22
CXCL12-206ENST00000395795 BCL11BQ9C0K0 894 aaPredicted RBP22.68■■□□□ 1.22
CXCL12-206ENST00000395795 NLRP2Q9NX02 1062 aa22.68■■□□□ 1.22
CXCL12-206ENST00000395795 PROM2Q8N271 834 aa22.67■■□□□ 1.22
CXCL12-206ENST00000395795 COG3Q96JB2 828 aa22.67■■□□□ 1.22
CXCL12-206ENST00000395795 RGPD3A6NKT7 1758 aaPredicted RBP22.67■■□□□ 1.22
CXCL12-206ENST00000395795 RGPD4Q7Z3J3 1758 aa22.67■■□□□ 1.22
CXCL12-206ENST00000395795 EXOC5O00471 708 aa22.66■■□□□ 1.22
CXCL12-206ENST00000395795 PLSCR1O15162 318 aa22.66■■□□□ 1.22
CXCL12-206ENST00000395795 GGNBP2Q9H3C7 697 aa22.66■■□□□ 1.22
CXCL12-206ENST00000395795 HOXC9P31274 260 aa22.65■■□□□ 1.22
CXCL12-206ENST00000395795 FAM208AQ9UK61 1670 aaKnown RBP22.65■■□□□ 1.22
CXCL12-206ENST00000395795 IL2RBP14784 551 aa22.64■■□□□ 1.21
CXCL12-206ENST00000395795 KCNQ2O43526 872 aa22.62■■□□□ 1.21
CXCL12-206ENST00000395795 RRS1Q15050 365 aaKnown RBP22.62■■□□□ 1.21
CXCL12-206ENST00000395795 CDCA8Q53HL2 280 aa22.62■■□□□ 1.21
CXCL12-206ENST00000395795 LTV1Q96GA3 475 aaPredicted RBP22.6■■□□□ 1.21
CXCL12-206ENST00000395795 ANO8Q9HCE9 1232 aaPredicted RBP22.6■■□□□ 1.21
CXCL12-206ENST00000395795 RGPD2P0DJD1 1756 aa22.6■■□□□ 1.21
CXCL12-206ENST00000395795 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
CXCL12-206ENST00000395795 NHSQ6T4R5 1651 aa22.59■■□□□ 1.21
CXCL12-206ENST00000395795 KIF20BQ96Q89 1820 aa22.59■■□□□ 1.21
CXCL12-206ENST00000395795 NSD3Q9BZ95 1437 aa22.58■■□□□ 1.21
CXCL12-206ENST00000395795 AMPHP49418 695 aa22.57■■□□□ 1.2
CXCL12-206ENST00000395795 MEGF6O75095 1541 aa22.57■■□□□ 1.2
CXCL12-206ENST00000395795 SHANK3Q9BYB0 1731 aa22.55■■□□□ 1.2
CXCL12-206ENST00000395795 NBPF6Q5VWK0 638 aa22.55■■□□□ 1.2
CXCL12-206ENST00000395795 NBPF4Q96M43 638 aa22.55■■□□□ 1.2
CXCL12-206ENST00000395795 HSPA5P11021 654 aaKnown RBP22.54■■□□□ 1.2
CXCL12-206ENST00000395795 NBPF14Q5TI25 921 aa22.54■■□□□ 1.2
CXCL12-206ENST00000395795 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
CXCL12-206ENST00000395795 ACSBG1Q96GR2 724 aa22.54■■□□□ 1.2
CXCL12-206ENST00000395795 TXNRD1Q16881 649 aa22.53■■□□□ 1.2
CXCL12-206ENST00000395795 HSP90AB2PQ58FF8 381 aa22.53■■□□□ 1.2
CXCL12-206ENST00000395795 INSRP06213 1382 aa22.52■■□□□ 1.2
CXCL12-206ENST00000395795 PDGFDQ9GZP0 370 aaPredicted RBP22.52■■□□□ 1.2
CXCL12-206ENST00000395795 CASZ1Q86V15 1759 aa22.51■■□□□ 1.19
CXCL12-206ENST00000395795 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
CXCL12-206ENST00000395795 BTAF1O14981 1849 aa22.5■■□□□ 1.19
CXCL12-206ENST00000395795 EMILIN1Q9Y6C2 1016 aa22.5■■□□□ 1.19
CXCL12-206ENST00000395795 ANKRD26Q9UPS8 1709 aa22.49■■□□□ 1.19
CXCL12-206ENST00000395795 EIF4G2P78344 907 aaKnown RBP eCLIP22.49■■□□□ 1.19
CXCL12-206ENST00000395795 USHBP1Q8N6Y0 703 aa22.49■■□□□ 1.19
CXCL12-206ENST00000395795 PAPPAQ13219 1627 aa22.49■■□□□ 1.19
CXCL12-206ENST00000395795 FLT4P35916 1363 aa22.49■■□□□ 1.19
CXCL12-206ENST00000395795 DDX54Q8TDD1 881 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms