RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 EIF5BO60841 1220 aaKnown RBP22.88■■□□□ 1.25
SREBF1-204ENST00000395756 MVPQ14764 893 aaKnown RBP22.87■■□□□ 1.25
SREBF1-204ENST00000395756 LRRC7Q96NW7 1537 aa22.86■■□□□ 1.25
SREBF1-204ENST00000395756 ATF7IPQ6VMQ6 1270 aa22.86■■□□□ 1.25
SREBF1-204ENST00000395756 NLRP6P59044 892 aa22.85■■□□□ 1.25
SREBF1-204ENST00000395756 MAP2P11137 1827 aaKnown RBP22.85■■□□□ 1.25
SREBF1-204ENST00000395756 TMEM57Q8N5G2 664 aa22.84■■□□□ 1.25
SREBF1-204ENST00000395756 MBIPQ9NS73 344 aa22.84■■□□□ 1.25
SREBF1-204ENST00000395756 KIF20BQ96Q89 1820 aa22.84■■□□□ 1.25
SREBF1-204ENST00000395756 NCBP3Q53F19 620 aaKnown RBP22.84■■□□□ 1.25
SREBF1-204ENST00000395756 MCM10Q7L590 875 aa22.84■■□□□ 1.25
SREBF1-204ENST00000395756 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.84■■□□□ 1.25
SREBF1-204ENST00000395756 ADGRB2O60241 1585 aa22.84■■□□□ 1.25
SREBF1-204ENST00000395756 CDC42BPGQ6DT37 1551 aa22.84■■□□□ 1.25
SREBF1-204ENST00000395756 ZBTB7CA1YPR0 619 aa22.84■■□□□ 1.25
SREBF1-204ENST00000395756 LTV1Q96GA3 475 aaPredicted RBP22.84■■□□□ 1.25
SREBF1-204ENST00000395756 IL16Q14005 1332 aa22.83■■□□□ 1.25
SREBF1-204ENST00000395756 FAM161AQ3B820 660 aa22.83■■□□□ 1.25
SREBF1-204ENST00000395756 SLC4A3P48751 1232 aa22.83■■□□□ 1.24
SREBF1-204ENST00000395756 AMPHP49418 695 aa22.83■■□□□ 1.24
SREBF1-204ENST00000395756 AATKQ6ZMQ8 1374 aa22.82■■□□□ 1.24
SREBF1-204ENST00000395756 C8orf34Q49A92 452 aa22.82■■□□□ 1.24
SREBF1-204ENST00000395756 USP6P35125 1406 aa22.81■■□□□ 1.24
SREBF1-204ENST00000395756 KRT24Q2M2I5 525 aa22.81■■□□□ 1.24
SREBF1-204ENST00000395756 CT47B1P0C2W7 299 aaPredicted RBP22.81■■□□□ 1.24
SREBF1-204ENST00000395756 C8orf58Q8NAV2 365 aa22.81■■□□□ 1.24
SREBF1-204ENST00000395756 MIS18AQ9NYP9 233 aa22.81■■□□□ 1.24
SREBF1-204ENST00000395756 MAP3K19Q56UN5 1328 aa22.81■■□□□ 1.24
SREBF1-204ENST00000395756 C3P01024 1663 aa22.8■■□□□ 1.24
SREBF1-204ENST00000395756 ANKRD26Q9UPS8 1709 aa22.8■■□□□ 1.24
SREBF1-204ENST00000395756 FOXO3O43524 673 aa22.8■■□□□ 1.24
SREBF1-204ENST00000395756 GNAI1P63096 354 aa22.8■■□□□ 1.24
SREBF1-204ENST00000395756 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
SREBF1-204ENST00000395756 PDZRN3Q9UPQ7 1066 aa22.79■■□□□ 1.24
SREBF1-204ENST00000395756 VAMP4O75379 141 aa22.79■■□□□ 1.24
SREBF1-204ENST00000395756 ABTB2Q8N961 1025 aa22.79■■□□□ 1.24
SREBF1-204ENST00000395756 RWDD1Q9H446 243 aaPredicted RBP22.79■■□□□ 1.24
SREBF1-204ENST00000395756 TWISTNBQ3B726 338 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-204ENST00000395756 IPO8O15397 1037 aaKnown RBP22.77■■□□□ 1.24
SREBF1-204ENST00000395756 CDK12Q9NYV4 1490 aaPredicted RBP22.77■■□□□ 1.24
SREBF1-204ENST00000395756 C1orf115Q9H7X2 142 aa22.76■■□□□ 1.23
SREBF1-204ENST00000395756 CALD1Q05682 793 aaKnown RBP22.76■■□□□ 1.23
SREBF1-204ENST00000395756 IFT57Q9NWB7 429 aa22.76■■□□□ 1.23
SREBF1-204ENST00000395756 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
SREBF1-204ENST00000395756 IL27Q8NEV9 243 aa22.75■■□□□ 1.23
SREBF1-204ENST00000395756 DDX19BQ9UMR2 479 aa22.75■■□□□ 1.23
SREBF1-204ENST00000395756 CFAP44Q96MT7 982 aa22.75■■□□□ 1.23
SREBF1-204ENST00000395756 LMOD3Q0VAK6 560 aa22.74■■□□□ 1.23
SREBF1-204ENST00000395756 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
SREBF1-204ENST00000395756 FER1L4A9Z1Z3 1794 aa22.73■■□□□ 1.23
SREBF1-204ENST00000395756 KIF16BQ96L93 1317 aa22.73■■□□□ 1.23
SREBF1-204ENST00000395756 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
SREBF1-204ENST00000395756 LMOD2Q6P5Q4 547 aa22.73■■□□□ 1.23
SREBF1-204ENST00000395756 SEC24BO95487 1268 aa22.73■■□□□ 1.23
SREBF1-204ENST00000395756 SLIT1O75093 1534 aa22.72■■□□□ 1.23
SREBF1-204ENST00000395756 KNDC1Q76NI1 1749 aa22.71■■□□□ 1.23
SREBF1-204ENST00000395756 ALDH1L2Q3SY69 923 aa22.71■■□□□ 1.23
SREBF1-204ENST00000395756 MRPL50Q8N5N7 158 aaKnown RBP22.71■■□□□ 1.23
SREBF1-204ENST00000395756 EYA1Q99502 592 aa22.71■■□□□ 1.23
SREBF1-204ENST00000395756 OVOS2A0A0J9YW53 1432 aa22.7■■□□□ 1.22
SREBF1-204ENST00000395756 OVOS2Q6IE36 1432 aa22.7■■□□□ 1.22
SREBF1-204ENST00000395756 ZNF853P0CG23 659 aa22.7■■□□□ 1.22
SREBF1-204ENST00000395756 MTHFSDQ2M296 383 aaKnown RBP22.7■■□□□ 1.22
SREBF1-204ENST00000395756 USHBP1Q8N6Y0 703 aa22.7■■□□□ 1.22
SREBF1-204ENST00000395756 TTC21AQ8NDW8 1320 aa22.68■■□□□ 1.22
SREBF1-204ENST00000395756 PHF8Q9UPP1 1060 aa22.68■■□□□ 1.22
SREBF1-204ENST00000395756 PSME1Q06323 249 aa22.68■■□□□ 1.22
SREBF1-204ENST00000395756 ZBTB40Q9NUA8 1239 aa22.68■■□□□ 1.22
SREBF1-204ENST00000395756 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-204ENST00000395756 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
SREBF1-204ENST00000395756 MON2Q7Z3U7 1717 aa22.66■■□□□ 1.22
SREBF1-204ENST00000395756 ITSN1Q15811 1721 aa22.66■■□□□ 1.22
SREBF1-204ENST00000395756 PTCH1Q13635 1447 aa22.65■■□□□ 1.22
SREBF1-204ENST00000395756 AAMPQ13685 434 aa22.65■■□□□ 1.22
SREBF1-204ENST00000395756 PKNOX2Q96KN3 472 aa22.65■■□□□ 1.22
SREBF1-204ENST00000395756 DIP2AQ14689 1571 aa22.64■■□□□ 1.21
SREBF1-204ENST00000395756 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
SREBF1-204ENST00000395756 NECTIN2Q92692 538 aa22.64■■□□□ 1.21
SREBF1-204ENST00000395756 ORAI2Q96SN7 254 aa22.63■■□□□ 1.21
SREBF1-204ENST00000395756 LNPKQ9C0E8 428 aa22.63■■□□□ 1.21
SREBF1-204ENST00000395756 USP31Q70CQ4 1352 aa22.63■■□□□ 1.21
SREBF1-204ENST00000395756 FLT4P35916 1363 aa22.62■■□□□ 1.21
SREBF1-204ENST00000395756 HOXC9P31274 260 aa22.62■■□□□ 1.21
SREBF1-204ENST00000395756 AKAP12Q02952 1782 aa22.62■■□□□ 1.21
SREBF1-204ENST00000395756 TSPYL4Q9UJ04 414 aa22.61■■□□□ 1.21
SREBF1-204ENST00000395756 ZBTB7BO15156 539 aaPredicted RBP22.6■■□□□ 1.21
SREBF1-204ENST00000395756 RGPD8O14715 1765 aaPredicted RBP22.6■■□□□ 1.21
SREBF1-204ENST00000395756 CEP170BQ9Y4F5 1589 aaPredicted RBP22.6■■□□□ 1.21
SREBF1-204ENST00000395756 CHL1O00533 1208 aa22.6■■□□□ 1.21
SREBF1-204ENST00000395756 SBNO1A3KN83 1393 aa22.59■■□□□ 1.21
SREBF1-204ENST00000395756 RIMS1Q86UR5 1692 aaKnown RBP22.59■■□□□ 1.21
SREBF1-204ENST00000395756 ZNF428Q96B54 188 aa22.59■■□□□ 1.21
SREBF1-204ENST00000395756 DDRGK1Q96HY6 314 aa22.59■■□□□ 1.21
SREBF1-204ENST00000395756 HDAC1Q13547 482 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-204ENST00000395756 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
SREBF1-204ENST00000395756 ANKRD45Q5TZF3 282 aa22.57■■□□□ 1.2
SREBF1-204ENST00000395756 SLC4A10Q6U841 1118 aa22.56■■□□□ 1.2
SREBF1-204ENST00000395756 PROSER2Q86WR7 435 aaPredicted RBP22.55■■□□□ 1.2
SREBF1-204ENST00000395756 PEAK1Q9H792 1746 aa22.55■■□□□ 1.2
SREBF1-204ENST00000395756 APBB1O00213 710 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms