RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 ANAPC15P60006 121 aa7.66□□□□□ -1.18
A1CF-206ENST00000395489 GTF2F1P35269 517 aaKnown RBP eCLIP7.65□□□□□ -1.18
A1CF-206ENST00000395489 CCDC73Q6ZRK6 1079 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 RPUSD2Q8IZ73 545 aaKnown RBP7.65□□□□□ -1.18
A1CF-206ENST00000395489 POGKQ9P215 609 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 VIRMAQ69YN4 1812 aaKnown RBP7.65□□□□□ -1.18
A1CF-206ENST00000395489 SKILP12757 684 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 MAPK8IP2Q13387 824 aaPredicted RBP7.65□□□□□ -1.18
A1CF-206ENST00000395489 DZIP1Q86YF9 867 aaKnown RBP7.65□□□□□ -1.18
A1CF-206ENST00000395489 CLUAP1Q96AJ1 413 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 CDK5RAP3Q96JB5 506 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 LRRFIP2Q9Y608 721 aaKnown RBP7.65□□□□□ -1.18
A1CF-206ENST00000395489 MAP2K1Q02750 393 aaPredicted RBP7.65□□□□□ -1.18
A1CF-206ENST00000395489 NEDD9Q14511 834 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 CCDC183Q5T5S1 534 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 CEP89Q96ST8 783 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 ANAPC4Q9UJX5 808 aa7.65□□□□□ -1.18
A1CF-206ENST00000395489 MPHOSPH6Q99547 160 aaKnown RBP7.65□□□□□ -1.19
A1CF-206ENST00000395489 K7ELQ4 463 aaPredicted RBP7.65□□□□□ -1.19
A1CF-206ENST00000395489 DNAJC8O75937 253 aaPredicted RBP7.65□□□□□ -1.19
A1CF-206ENST00000395489 NBPF9Q3BBW0 867 aa7.65□□□□□ -1.19
A1CF-206ENST00000395489 RPAP2Q8IXW5 612 aaPredicted RBP7.65□□□□□ -1.19
A1CF-206ENST00000395489 SMARCC1Q92922 1105 aaPredicted RBP7.65□□□□□ -1.19
A1CF-206ENST00000395489 PRDM2Q13029 1718 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 PEG3Q9GZU2 1588 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 UACAQ9BZF9 1416 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 ZRANB2O95218 330 aaKnown RBP eCLIP7.64□□□□□ -1.19
A1CF-206ENST00000395489 KIF5BP33176 963 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 CARD11Q9BXL7 1154 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 MCTP1Q6DN14 999 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 CCDC150Q8NCX0 1101 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 CTAGE5O15320 804 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 SFPQP23246 707 aaKnown RBP eCLIP7.64□□□□□ -1.19
A1CF-206ENST00000395489 NUP133Q8WUM0 1156 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 NBPF8Q3BBV2 869 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 CCDC40Q4G0X9 1142 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 PLCD3Q8N3E9 789 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 SPRYD3Q8NCJ5 442 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 FILIP1LQ4L180 1135 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 ZFYP08048 801 aaPredicted RBP7.64□□□□□ -1.19
A1CF-206ENST00000395489 IFFO1Q0D2I5 559 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 VCXQ9H320 206 aa7.64□□□□□ -1.19
A1CF-206ENST00000395489 ZNF365Q70YC5 407 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 UBA5Q9GZZ9 404 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 CDC45O75419 566 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 SETDB1Q15047 1291 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 TXLNAP40222 546 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 WDR63Q8IWG1 891 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 PIBF1Q8WXW3 757 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 CEP57L1Q8IYX8 460 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 FEZ2Q9UHY8 353 aaPredicted RBP7.63□□□□□ -1.19
A1CF-206ENST00000395489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.63□□□□□ -1.19
A1CF-206ENST00000395489 ERO1AQ96HE7 468 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 NOLC1Q14978 699 aaKnown RBP eCLIP7.63□□□□□ -1.19
A1CF-206ENST00000395489 VEZTQ9HBM0 779 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 DACH1Q9UI36 760 aa7.63□□□□□ -1.19
A1CF-206ENST00000395489 KINO60870 393 aaKnown RBP7.62□□□□□ -1.19
A1CF-206ENST00000395489 NACADO15069 1562 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 CCDC114Q96M63 670 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 MAP7Q14244 749 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 CCDC102AQ96A19 550 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 RUFY2Q8WXA3 655 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 GFM2Q969S9 779 aaKnown RBP7.62□□□□□ -1.19
A1CF-206ENST00000395489 ZMYM4Q5VZL5 1548 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 PEX19P40855 299 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 SMC1AQ14683 1233 aaKnown RBP7.62□□□□□ -1.19
A1CF-206ENST00000395489 SATB2Q9UPW6 733 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 MMS22LQ6ZRQ5 1243 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 JRKLQ9Y4A0 524 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 SCRIBQ14160 1630 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 LMNTD2Q8IXW0 634 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 STAC3Q96MF2 364 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 MED4Q9NPJ6 270 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 SLU7O95391 586 aaKnown RBP7.62□□□□□ -1.19
A1CF-206ENST00000395489 SLFNL1Q499Z3 407 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 ZKSCAN2Q63HK3 967 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 MSL1Q68DK7 614 aa7.62□□□□□ -1.19
A1CF-206ENST00000395489 LUC7L2Q9Y383 392 aaKnown RBP7.62□□□□□ -1.19
A1CF-206ENST00000395489 LMAN1P49257 510 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.61□□□□□ -1.19
A1CF-206ENST00000395489 PPP1R12AO14974 1030 aaPredicted RBP7.61□□□□□ -1.19
A1CF-206ENST00000395489 ARFGAP2Q8N6H7 521 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 ZKSCAN1P17029 563 aaPredicted RBP7.61□□□□□ -1.19
A1CF-206ENST00000395489 DDX46Q7L014 1031 aaKnown RBP7.61□□□□□ -1.19
A1CF-206ENST00000395489 ARMC9Q7Z3E5 817 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 NSRP1Q9H0G5 558 aaKnown RBP7.61□□□□□ -1.19
A1CF-206ENST00000395489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.61□□□□□ -1.19
A1CF-206ENST00000395489 CEP135Q66GS9 1140 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 CAPN2P17655 700 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 RASSF8Q8NHQ8 419 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 CFAP57Q96MR6 1250 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 POLR1AO95602 1720 aaPredicted RBP7.61□□□□□ -1.19
A1CF-206ENST00000395489 LRSAM1Q6UWE0 723 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 UIMC1Q96RL1 719 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 OLFM4Q6UX06 510 aa7.61□□□□□ -1.19
A1CF-206ENST00000395489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.61□□□□□ -1.19
A1CF-206ENST00000395489 OPA1O60313 960 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 TSNAXIP1Q2TAA8 658 aa7.6□□□□□ -1.19
A1CF-206ENST00000395489 ZNF428Q96B54 188 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms