RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 CHIC2Q9UKJ5 165 aa12.86□□□□□ -0.35
PFDN6-205ENST00000395134 PPP1R12CQ9BZL4 782 aa12.85□□□□□ -0.35
PFDN6-205ENST00000395134 XIRP1Q702N8 1843 aaKnown RBP12.84□□□□□ -0.35
PFDN6-205ENST00000395134 RBM47A0AV96 593 aaKnown RBP12.84□□□□□ -0.35
PFDN6-205ENST00000395134 ERBINQ96RT1 1412 aa12.84□□□□□ -0.35
PFDN6-205ENST00000395134 MED14O60244 1454 aa12.84□□□□□ -0.35
PFDN6-205ENST00000395134 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
PFDN6-205ENST00000395134 MAP3K7O43318 606 aa12.83□□□□□ -0.36
PFDN6-205ENST00000395134 TIE1P35590 1138 aa12.83□□□□□ -0.36
PFDN6-205ENST00000395134 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
PFDN6-205ENST00000395134 EPAS1Q99814 870 aa12.83□□□□□ -0.36
PFDN6-205ENST00000395134 SYNMO15061 1565 aa12.82□□□□□ -0.36
PFDN6-205ENST00000395134 ALKQ9UM73 1620 aa12.82□□□□□ -0.36
PFDN6-205ENST00000395134 SPTLC1O15269 473 aa12.82□□□□□ -0.36
PFDN6-205ENST00000395134 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
PFDN6-205ENST00000395134 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
PFDN6-205ENST00000395134 PXYLP1Q8TE99 480 aa12.82□□□□□ -0.36
PFDN6-205ENST00000395134 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
PFDN6-205ENST00000395134 SCAF11Q99590 1463 aaKnown RBP12.82□□□□□ -0.36
PFDN6-205ENST00000395134 HSPA1LP34931 641 aa12.81□□□□□ -0.36
PFDN6-205ENST00000395134 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
PFDN6-205ENST00000395134 SPIRE2Q8WWL2 714 aa12.81□□□□□ -0.36
PFDN6-205ENST00000395134 GNEQ9Y223 722 aaKnown RBP12.81□□□□□ -0.36
PFDN6-205ENST00000395134 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
PFDN6-205ENST00000395134 AP1G2O75843 785 aa12.8□□□□□ -0.36
PFDN6-205ENST00000395134 PHF14O94880 888 aa12.8□□□□□ -0.36
PFDN6-205ENST00000395134 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
PFDN6-205ENST00000395134 ANO8Q9HCE9 1232 aaPredicted RBP12.8□□□□□ -0.36
PFDN6-205ENST00000395134 MED1Q15648 1581 aaPredicted RBP12.8□□□□□ -0.36
PFDN6-205ENST00000395134 KANK1Q14678 1352 aa12.8□□□□□ -0.36
PFDN6-205ENST00000395134 EFCAB6Q5THR3 1501 aa12.79□□□□□ -0.36
PFDN6-205ENST00000395134 LRRC7Q96NW7 1537 aa12.79□□□□□ -0.36
PFDN6-205ENST00000395134 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
PFDN6-205ENST00000395134 ANKRD30AQ9BXX3 1397 aa12.79□□□□□ -0.36
PFDN6-205ENST00000395134 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
PFDN6-205ENST00000395134 ATG7O95352 703 aa12.78□□□□□ -0.36
PFDN6-205ENST00000395134 LTKP29376 864 aa12.78□□□□□ -0.36
PFDN6-205ENST00000395134 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
PFDN6-205ENST00000395134 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
PFDN6-205ENST00000395134 SLIT1O75093 1534 aa12.78□□□□□ -0.36
PFDN6-205ENST00000395134 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
PFDN6-205ENST00000395134 TOM1O60784 492 aa12.77□□□□□ -0.37
PFDN6-205ENST00000395134 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.37
PFDN6-205ENST00000395134 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
PFDN6-205ENST00000395134 ADGRG1Q9Y653 693 aa12.77□□□□□ -0.37
PFDN6-205ENST00000395134 ARHGAP23Q9P227 1491 aa12.77□□□□□ -0.37
PFDN6-205ENST00000395134 TSR1Q2NL82 804 aaKnown RBP12.76□□□□□ -0.37
PFDN6-205ENST00000395134 TXNDC2Q86VQ3 553 aa12.76□□□□□ -0.37
PFDN6-205ENST00000395134 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
PFDN6-205ENST00000395134 ADGRB3O60242 1522 aa12.76□□□□□ -0.37
PFDN6-205ENST00000395134 TET3O43151 1660 aa12.75□□□□□ -0.37
PFDN6-205ENST00000395134 LILRB3O75022 631 aa12.75□□□□□ -0.37
PFDN6-205ENST00000395134 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
PFDN6-205ENST00000395134 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
PFDN6-205ENST00000395134 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
PFDN6-205ENST00000395134 KDM5AP29375 1690 aaKnown RBP12.75□□□□□ -0.37
PFDN6-205ENST00000395134 RSBN1LQ6PCB5 846 aaPredicted RBP12.75□□□□□ -0.37
PFDN6-205ENST00000395134 LMTK2Q8IWU2 1503 aa12.75□□□□□ -0.37
PFDN6-205ENST00000395134 MYT1Q01538 1121 aa12.74□□□□□ -0.37
PFDN6-205ENST00000395134 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
PFDN6-205ENST00000395134 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
PFDN6-205ENST00000395134 GJD4Q96KN9 370 aaPredicted RBP12.74□□□□□ -0.37
PFDN6-205ENST00000395134 TRIM35Q9UPQ4 493 aa12.74□□□□□ -0.37
PFDN6-205ENST00000395134 G3V3G9 751 aa12.73□□□□□ -0.37
PFDN6-205ENST00000395134 QPCTQ16769 361 aa12.73□□□□□ -0.37
PFDN6-205ENST00000395134 TMEM2Q9UHN6 1383 aa12.72□□□□□ -0.37
PFDN6-205ENST00000395134 B4GALNT3Q6L9W6 998 aa12.72□□□□□ -0.37
PFDN6-205ENST00000395134 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
PFDN6-205ENST00000395134 ALG2Q9H553 416 aa12.72□□□□□ -0.37
PFDN6-205ENST00000395134 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
PFDN6-205ENST00000395134 UNC13BO14795 1591 aa12.72□□□□□ -0.37
PFDN6-205ENST00000395134 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.37
PFDN6-205ENST00000395134 E9PCH4 1651 aa12.71□□□□□ -0.37
PFDN6-205ENST00000395134 GJA5P36382 358 aa12.71□□□□□ -0.37
PFDN6-205ENST00000395134 IDI1Q13907 227 aa12.71□□□□□ -0.37
PFDN6-205ENST00000395134 RTL5Q5HYW3 569 aaPredicted RBP12.71□□□□□ -0.37
PFDN6-205ENST00000395134 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
PFDN6-205ENST00000395134 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
PFDN6-205ENST00000395134 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
PFDN6-205ENST00000395134 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
PFDN6-205ENST00000395134 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
PFDN6-205ENST00000395134 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
PFDN6-205ENST00000395134 NOS1P29475 1434 aa12.7□□□□□ -0.38
PFDN6-205ENST00000395134 ERCC3P19447 782 aa12.69□□□□□ -0.38
PFDN6-205ENST00000395134 CDCA8Q53HL2 280 aa12.69□□□□□ -0.38
PFDN6-205ENST00000395134 MRRFQ96E11 262 aaKnown RBP12.69□□□□□ -0.38
PFDN6-205ENST00000395134 SLC26A8Q96RN1 970 aa12.69□□□□□ -0.38
PFDN6-205ENST00000395134 KIAA1522Q9P206 1035 aaPredicted RBP12.69□□□□□ -0.38
PFDN6-205ENST00000395134 CHD2O14647 1828 aaKnown RBP12.68□□□□□ -0.38
PFDN6-205ENST00000395134 MOXD2PA6NHM9 499 aa12.68□□□□□ -0.38
PFDN6-205ENST00000395134 ITGAEP38570 1179 aa12.68□□□□□ -0.38
PFDN6-205ENST00000395134 VAC14Q08AM6 782 aa12.68□□□□□ -0.38
PFDN6-205ENST00000395134 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
PFDN6-205ENST00000395134 PCDHGA10Q9Y5H3 936 aa12.68□□□□□ -0.38
PFDN6-205ENST00000395134 ROBO1Q9Y6N7 1651 aa12.67□□□□□ -0.38
PFDN6-205ENST00000395134 TMEM131LA2VDJ0 1609 aa12.67□□□□□ -0.38
PFDN6-205ENST00000395134 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
PFDN6-205ENST00000395134 TMEM92Q6UXU6 159 aa12.67□□□□□ -0.38
PFDN6-205ENST00000395134 CCER1Q8TC90 406 aaPredicted RBP12.67□□□□□ -0.38
PFDN6-205ENST00000395134 IQGAP3Q86VI3 1631 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms