RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 MYH16Q9H6N6 1097 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 CABP1Q9NZU7 370 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 LMOD3Q0VAK6 560 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 GOLGA2Q08379 1002 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 SKAP1Q86WV1 359 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 CHMP3Q9Y3E7 222 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 SLFN5Q08AF3 891 aa7.3□□□□□ -1.24
MATR3-230ENST00000394800 TEX2Q8IWB9 1127 aa7.3□□□□□ -1.24
MATR3-230ENST00000394800 WWC3Q9ULE0 1092 aa7.3□□□□□ -1.24
MATR3-230ENST00000394800 SMARCA5O60264 1052 aaPredicted RBP7.3□□□□□ -1.24
MATR3-230ENST00000394800 HSP90AB4PQ58FF6 505 aa7.3□□□□□ -1.24
MATR3-230ENST00000394800 TXNDC2Q86VQ3 553 aa7.3□□□□□ -1.24
MATR3-230ENST00000394800 NLRP1Q9C000 1473 aa7.3□□□□□ -1.24
MATR3-230ENST00000394800 L1TD1Q5T7N2 865 aaKnown RBP7.3□□□□□ -1.24
MATR3-230ENST00000394800 TRMT2AQ8IZ69 625 aaKnown RBP7.3□□□□□ -1.24
MATR3-230ENST00000394800 ABCC11Q96J66 1382 aa7.3□□□□□ -1.24
MATR3-230ENST00000394800 SOX12O15370 315 aa7.3□□□□□ -1.24
MATR3-230ENST00000394800 AXDND1Q5T1B0 1012 aaPredicted RBP7.29□□□□□ -1.24
MATR3-230ENST00000394800 ESF1Q9H501 851 aaKnown RBP7.29□□□□□ -1.24
MATR3-230ENST00000394800 LTKP29376 864 aa7.29□□□□□ -1.24
MATR3-230ENST00000394800 USP32Q8NFA0 1604 aa7.29□□□□□ -1.24
MATR3-230ENST00000394800 TMED8Q6PL24 325 aaPredicted RBP7.29□□□□□ -1.24
MATR3-230ENST00000394800 TCP11L2Q8N4U5 519 aa7.29□□□□□ -1.24
MATR3-230ENST00000394800 CRBNQ96SW2 442 aa7.29□□□□□ -1.24
MATR3-230ENST00000394800 GOLGA6L22H0YM25 854 aa7.28□□□□□ -1.24
MATR3-230ENST00000394800 ARMCX6Q7L4S7 300 aa7.28□□□□□ -1.24
MATR3-230ENST00000394800 DNAJC2Q99543 621 aaKnown RBP7.28□□□□□ -1.24
MATR3-230ENST00000394800 SH3BP5O60239 455 aa7.28□□□□□ -1.24
MATR3-230ENST00000394800 BCAR3O75815 825 aa7.28□□□□□ -1.24
MATR3-230ENST00000394800 ANKRD62A6NC57 917 aa7.28□□□□□ -1.24
MATR3-230ENST00000394800 ATAD2Q6PL18 1390 aa7.28□□□□□ -1.24
MATR3-230ENST00000394800 TNRQ92752 1358 aa7.28□□□□□ -1.24
MATR3-230ENST00000394800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.27□□□□□ -1.254e-7■■■□□ 14.8
MATR3-230ENST00000394800 ZRANB1Q9UGI0 708 aa7.27□□□□□ -1.25
MATR3-230ENST00000394800 GOLGA6L1Q8N7Z2 621 aa7.27□□□□□ -1.25
MATR3-230ENST00000394800 UBR1Q8IWV7 1749 aa7.27□□□□□ -1.25
MATR3-230ENST00000394800 NPHP1O15259 732 aa7.27□□□□□ -1.25
MATR3-230ENST00000394800 SLC26A8Q96RN1 970 aa7.27□□□□□ -1.25
MATR3-230ENST00000394800 MSH5O43196 834 aa7.26□□□□□ -1.25
MATR3-230ENST00000394800 U2AF1L5P0DN76 240 aaPredicted RBP7.26□□□□□ -1.25
MATR3-230ENST00000394800 U2AF1Q01081 240 aaKnown RBP eCLIP7.26□□□□□ -1.25
MATR3-230ENST00000394800 TMEM2Q9UHN6 1383 aa7.26□□□□□ -1.25
MATR3-230ENST00000394800 NUTM2FA1L443 756 aa7.26□□□□□ -1.25
MATR3-230ENST00000394800 CCDC82Q8N4S0 544 aa7.26□□□□□ -1.25
MATR3-230ENST00000394800 SECISBP2LQ93073 1101 aaKnown RBP7.26□□□□□ -1.25
MATR3-230ENST00000394800 ZNF622Q969S3 477 aaKnown RBP eCLIP7.26□□□□□ -1.252e-13■□□□□ 9.5
MATR3-230ENST00000394800 TERF2IPQ9NYB0 399 aa7.26□□□□□ -1.25
MATR3-230ENST00000394800 ZBTB12Q9Y330 459 aaPredicted RBP7.26□□□□□ -1.25
MATR3-230ENST00000394800 MAP2P11137 1827 aaKnown RBP7.26□□□□□ -1.25
MATR3-230ENST00000394800 PEX14O75381 377 aa7.26□□□□□ -1.25
MATR3-230ENST00000394800 ADAMTS13Q76LX8 1427 aa7.26□□□□□ -1.25
MATR3-230ENST00000394800 NAP1L1P55209 391 aaKnown RBP7.26□□□□□ -1.25
MATR3-230ENST00000394800 PRR36Q9H6K5 1346 aa7.25□□□□□ -1.25
MATR3-230ENST00000394800 ROBO2Q9HCK4 1378 aa7.25□□□□□ -1.25
MATR3-230ENST00000394800 RUNDC1Q96C34 613 aa7.25□□□□□ -1.25
MATR3-230ENST00000394800 IQSEC2Q5JU85 1478 aa7.25□□□□□ -1.25
MATR3-230ENST00000394800 WASLO00401 505 aaPredicted RBP7.25□□□□□ -1.25
MATR3-230ENST00000394800 CASC1Q6TDU7 716 aa7.25□□□□□ -1.25
MATR3-230ENST00000394800 NSD2O96028 1365 aa7.25□□□□□ -1.25
MATR3-230ENST00000394800 MPHOSPH10O00566 681 aaKnown RBP7.25□□□□□ -1.25
MATR3-230ENST00000394800 U2SURPO15042 1029 aaKnown RBP7.25□□□□□ -1.25
MATR3-230ENST00000394800 COL3A1P02461 1466 aaPredicted RBP7.25□□□□□ -1.25
MATR3-230ENST00000394800 DLC1Q96QB1 1528 aa7.24□□□□□ -1.25
MATR3-230ENST00000394800 TRHP20396 242 aaPredicted RBP7.24□□□□□ -1.25
MATR3-230ENST00000394800 NINLQ9Y2I6 1382 aa7.24□□□□□ -1.25
MATR3-230ENST00000394800 NKTRP30414 1462 aaKnown RBP7.24□□□□□ -1.25
MATR3-230ENST00000394800 POLD1P28340 1107 aa7.24□□□□□ -1.25
MATR3-230ENST00000394800 NME9Q86XW9 330 aa7.24□□□□□ -1.25
MATR3-230ENST00000394800 HDAC5Q9UQL6 1122 aa7.24□□□□□ -1.25
MATR3-230ENST00000394800 POLKQ9UBT6 870 aa7.24□□□□□ -1.25
MATR3-230ENST00000394800 NUDT16Q96DE0 195 aaKnown RBP7.24□□□□□ -1.25
MATR3-230ENST00000394800 TNNQ9UQP3 1299 aa7.24□□□□□ -1.25
MATR3-230ENST00000394800 ANKRD26Q9UPS8 1709 aa7.24□□□□□ -1.25
MATR3-230ENST00000394800 HDGFL2Q7Z4V5 671 aaPredicted RBP7.23□□□□□ -1.25
MATR3-230ENST00000394800 PLEKHF1Q96S99 279 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 C3P01024 1663 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.23□□□□□ -1.25
MATR3-230ENST00000394800 CFAP53Q96M91 514 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 BCL2L13Q9BXK5 485 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.23□□□□□ -1.25
MATR3-230ENST00000394800 RRP9O43818 475 aaKnown RBP7.23□□□□□ -1.25
MATR3-230ENST00000394800 EMILIN1Q9Y6C2 1016 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 TECPR2O15040 1411 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 CPSF1Q10570 1443 aaKnown RBP7.23□□□□□ -1.25
MATR3-230ENST00000394800 PAIP2Q9BPZ3 127 aaKnown RBP7.23□□□□□ -1.25
MATR3-230ENST00000394800 CCDC61Q9Y6R9 512 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 CPS1P31327 1500 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 PPIP5K1Q6PFW1 1433 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 PIK3R5Q8WYR1 880 aa7.23□□□□□ -1.25
MATR3-230ENST00000394800 PTPRUQ92729 1446 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 ERICH4A6NGS2 130 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 PNPLA6Q8IY17 1366 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 KIF20BQ96Q89 1820 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 HSCBQ8IWL3 235 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 TRIM35Q9UPQ4 493 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 TAF3Q5VWG9 929 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 TSR2Q969E8 191 aaKnown RBP7.22□□□□□ -1.25
MATR3-230ENST00000394800 NECTIN2Q92692 538 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 MED14O60244 1454 aa7.22□□□□□ -1.25
MATR3-230ENST00000394800 ATP7BP35670 1465 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms