RNA–Protein interactions for RNA: ENST00000394604.5

CLDN12-202, Transcript of claudin 12, humanhuman

TSL 5

Gene CLDN12, Length 846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-202ENST00000394604 MST1RQ04912 1400 aa12.21□□□□□ -0.45
CLDN12-202ENST00000394604 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
CLDN12-202ENST00000394604 KIF1AQ12756 1690 aa12.21□□□□□ -0.45
CLDN12-202ENST00000394604 PSME1Q06323 249 aa12.2□□□□□ -0.46
CLDN12-202ENST00000394604 CFAP53Q96M91 514 aa12.2□□□□□ -0.46
CLDN12-202ENST00000394604 ORAI2Q96SN7 254 aa12.2□□□□□ -0.46
CLDN12-202ENST00000394604 PCDHB13Q9Y5F0 798 aa12.2□□□□□ -0.46
CLDN12-202ENST00000394604 CENPBP07199 599 aaPredicted RBP12.19□□□□□ -0.46
CLDN12-202ENST00000394604 MTHFSP49914 203 aa12.19□□□□□ -0.46
CLDN12-202ENST00000394604 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
CLDN12-202ENST00000394604 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
CLDN12-202ENST00000394604 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
CLDN12-202ENST00000394604 ATN1P54259 1190 aaPredicted RBP12.17□□□□□ -0.46
CLDN12-202ENST00000394604 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLDN12-202ENST00000394604 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
CLDN12-202ENST00000394604 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
CLDN12-202ENST00000394604 INSRP06213 1382 aa12.17□□□□□ -0.46
CLDN12-202ENST00000394604 FOXO3O43524 673 aa12.16□□□□□ -0.46
CLDN12-202ENST00000394604 PYGBP11216 843 aa12.15□□□□□ -0.46
CLDN12-202ENST00000394604 NLRP6P59044 892 aa12.15□□□□□ -0.46
CLDN12-202ENST00000394604 HNRNPUQ00839 825 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLDN12-202ENST00000394604 KRT28Q7Z3Y7 464 aa12.15□□□□□ -0.46
CLDN12-202ENST00000394604 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
CLDN12-202ENST00000394604 ABTB2Q8N961 1025 aa12.15□□□□□ -0.46
CLDN12-202ENST00000394604 SLAIN2Q9P270 581 aa12.15□□□□□ -0.46
CLDN12-202ENST00000394604 LTBP4Q8N2S1 1624 aa12.15□□□□□ -0.47
CLDN12-202ENST00000394604 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
CLDN12-202ENST00000394604 PIK3C2AO00443 1686 aa12.14□□□□□ -0.47
CLDN12-202ENST00000394604 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
CLDN12-202ENST00000394604 POLKQ9UBT6 870 aa12.14□□□□□ -0.47
CLDN12-202ENST00000394604 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
CLDN12-202ENST00000394604 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
CLDN12-202ENST00000394604 TIE1P35590 1138 aa12.13□□□□□ -0.47
CLDN12-202ENST00000394604 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
CLDN12-202ENST00000394604 NUDCQ9Y266 331 aa12.13□□□□□ -0.47
CLDN12-202ENST00000394604 MAP2P11137 1827 aaKnown RBP12.13□□□□□ -0.47
CLDN12-202ENST00000394604 SMG6Q86US8 1419 aaKnown RBP12.12□□□□□ -0.47
CLDN12-202ENST00000394604 BRINP3Q76B58 766 aa12.12□□□□□ -0.47
CLDN12-202ENST00000394604 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
CLDN12-202ENST00000394604 ADAMTS8Q9UP79 889 aa12.12□□□□□ -0.47
CLDN12-202ENST00000394604 SBNO1A3KN83 1393 aa12.12□□□□□ -0.47
CLDN12-202ENST00000394604 PNPLA6Q8IY17 1366 aa12.12□□□□□ -0.47
CLDN12-202ENST00000394604 TRPM3Q9HCF6 1732 aaPredicted RBP12.11□□□□□ -0.47
CLDN12-202ENST00000394604 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
CLDN12-202ENST00000394604 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
CLDN12-202ENST00000394604 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
CLDN12-202ENST00000394604 CDK12Q9NYV4 1490 aaPredicted RBP12.1□□□□□ -0.47
CLDN12-202ENST00000394604 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
CLDN12-202ENST00000394604 DIAPH1O60610 1272 aaKnown RBP12.1□□□□□ -0.47
CLDN12-202ENST00000394604 FBLN1P23142 703 aa12.1□□□□□ -0.47
CLDN12-202ENST00000394604 RRS1Q15050 365 aaKnown RBP12.1□□□□□ -0.47
CLDN12-202ENST00000394604 NUTM2GQ5VZR2 741 aa12.1□□□□□ -0.47
CLDN12-202ENST00000394604 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
CLDN12-202ENST00000394604 EMILIN1Q9Y6C2 1016 aa12.1□□□□□ -0.47
CLDN12-202ENST00000394604 SHPRHQ149N8 1683 aa12.1□□□□□ -0.47
CLDN12-202ENST00000394604 COL3A1P02461 1466 aaPredicted RBP12.09□□□□□ -0.47
CLDN12-202ENST00000394604 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
CLDN12-202ENST00000394604 ZBED9Q6R2W3 1325 aa12.09□□□□□ -0.47
CLDN12-202ENST00000394604 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.47
CLDN12-202ENST00000394604 SOX12O15370 315 aa12.08□□□□□ -0.48
CLDN12-202ENST00000394604 C7P10643 843 aa12.08□□□□□ -0.48
CLDN12-202ENST00000394604 GSE1Q14687 1217 aa12.08□□□□□ -0.48
CLDN12-202ENST00000394604 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
CLDN12-202ENST00000394604 PXDNQ92626 1479 aa12.08□□□□□ -0.48
CLDN12-202ENST00000394604 KIF24Q5T7B8 1368 aa12.07□□□□□ -0.48
CLDN12-202ENST00000394604 ALS2Q96Q42 1657 aa12.07□□□□□ -0.48
CLDN12-202ENST00000394604 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
CLDN12-202ENST00000394604 AMPHP49418 695 aa12.07□□□□□ -0.48
CLDN12-202ENST00000394604 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLDN12-202ENST00000394604 TNS3Q68CZ2 1445 aa12.07□□□□□ -0.48
CLDN12-202ENST00000394604 SPOCK2Q92563 424 aa12.07□□□□□ -0.48
CLDN12-202ENST00000394604 DDX17Q92841 729 aaKnown RBP12.07□□□□□ -0.48
CLDN12-202ENST00000394604 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
CLDN12-202ENST00000394604 MAP3K19Q56UN5 1328 aa12.07□□□□□ -0.48
CLDN12-202ENST00000394604 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
CLDN12-202ENST00000394604 ARHGEF10O15013 1369 aa12.06□□□□□ -0.48
CLDN12-202ENST00000394604 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
CLDN12-202ENST00000394604 USP19O94966 1318 aa12.06□□□□□ -0.48
CLDN12-202ENST00000394604 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
CLDN12-202ENST00000394604 SLIT3O75094 1523 aa12.06□□□□□ -0.48
CLDN12-202ENST00000394604 FLT4P35916 1363 aa12.05□□□□□ -0.48
CLDN12-202ENST00000394604 GCP02774 474 aa12.05□□□□□ -0.48
CLDN12-202ENST00000394604 IL13P35225 146 aa12.05□□□□□ -0.48
CLDN12-202ENST00000394604 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
CLDN12-202ENST00000394604 RUNDC1Q96C34 613 aa12.05□□□□□ -0.48
CLDN12-202ENST00000394604 RTL1A6NKG5 1358 aa12.05□□□□□ -0.48
CLDN12-202ENST00000394604 TOM1O60784 492 aa12.04□□□□□ -0.48
CLDN12-202ENST00000394604 NGEFQ8N5V2 710 aa12.04□□□□□ -0.48
CLDN12-202ENST00000394604 NFAT5O94916 1531 aa12.04□□□□□ -0.48
CLDN12-202ENST00000394604 NHSL1Q5SYE7 1610 aa12.04□□□□□ -0.48
CLDN12-202ENST00000394604 PEAK1Q9H792 1746 aa12.03□□□□□ -0.48
CLDN12-202ENST00000394604 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
CLDN12-202ENST00000394604 CCDC146Q8IYE0 955 aa12.03□□□□□ -0.48
CLDN12-202ENST00000394604 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
CLDN12-202ENST00000394604 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
CLDN12-202ENST00000394604 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
CLDN12-202ENST00000394604 FCHSD2O94868 740 aa12.02□□□□□ -0.49
CLDN12-202ENST00000394604 NEFMP07197 916 aa12.02□□□□□ -0.49
CLDN12-202ENST00000394604 HOXC9P31274 260 aa12.02□□□□□ -0.49
CLDN12-202ENST00000394604 EIF4A2Q14240 407 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms