RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ATF7IPQ6VMQ6 1270 aa19.72■□□□□ 0.75
PTBP1-204ENST00000394601 PANK2Q9BZ23 570 aa19.72■□□□□ 0.75
PTBP1-204ENST00000394601 NOB1Q9ULX3 412 aaKnown RBP19.72■□□□□ 0.75
PTBP1-204ENST00000394601 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
PTBP1-204ENST00000394601 SMC4Q9NTJ3 1288 aa19.72■□□□□ 0.75
PTBP1-204ENST00000394601 EMILIN1Q9Y6C2 1016 aa19.71■□□□□ 0.75
PTBP1-204ENST00000394601 MLECQ14165 292 aa19.71■□□□□ 0.75
PTBP1-204ENST00000394601 PRKAR2BP31323 418 aa19.71■□□□□ 0.75
PTBP1-204ENST00000394601 BRPF1P55201 1214 aaPredicted RBP19.71■□□□□ 0.75
PTBP1-204ENST00000394601 HDAC1Q13547 482 aaPredicted RBP19.71■□□□□ 0.75
PTBP1-204ENST00000394601 NME9Q86XW9 330 aa19.71■□□□□ 0.75
PTBP1-204ENST00000394601 ADAMTS13Q76LX8 1427 aa19.7■□□□□ 0.74
PTBP1-204ENST00000394601 PRR36Q9H6K5 1346 aa19.7■□□□□ 0.74
PTBP1-204ENST00000394601 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
PTBP1-204ENST00000394601 TXNDC2Q86VQ3 553 aa19.69■□□□□ 0.74
PTBP1-204ENST00000394601 ZBTB40Q9NUA8 1239 aa19.69■□□□□ 0.74
PTBP1-204ENST00000394601 ZNF853P0CG23 659 aa19.68■□□□□ 0.74
PTBP1-204ENST00000394601 TMEM57Q8N5G2 664 aa19.68■□□□□ 0.74
PTBP1-204ENST00000394601 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
PTBP1-204ENST00000394601 ALDH1L2Q3SY69 923 aa19.67■□□□□ 0.74
PTBP1-204ENST00000394601 NUDT16Q96DE0 195 aaKnown RBP19.67■□□□□ 0.74
PTBP1-204ENST00000394601 ROBO2Q9HCK4 1378 aa19.67■□□□□ 0.74
PTBP1-204ENST00000394601 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.67■□□□□ 0.74
PTBP1-204ENST00000394601 NFE2L2Q16236 605 aa19.66■□□□□ 0.74
PTBP1-204ENST00000394601 FTSJ3Q8IY81 847 aaKnown RBP19.66■□□□□ 0.74
PTBP1-204ENST00000394601 PIK3R4Q99570 1358 aa19.66■□□□□ 0.74
PTBP1-204ENST00000394601 TMEM2Q9UHN6 1383 aa19.66■□□□□ 0.74
PTBP1-204ENST00000394601 SMC5Q8IY18 1101 aa19.65■□□□□ 0.74
PTBP1-204ENST00000394601 PODXL2Q9NZ53 605 aa19.65■□□□□ 0.74
PTBP1-204ENST00000394601 DDX19BQ9UMR2 479 aa19.65■□□□□ 0.74
PTBP1-204ENST00000394601 RGPD1P0DJD0 1748 aa19.65■□□□□ 0.74
PTBP1-204ENST00000394601 PEAK1Q9H792 1746 aa19.65■□□□□ 0.74
PTBP1-204ENST00000394601 HMOX1P09601 288 aa19.65■□□□□ 0.74
PTBP1-204ENST00000394601 TBC1D32Q96NH3 1257 aa19.64■□□□□ 0.73
PTBP1-204ENST00000394601 VAMP4O75379 141 aa19.64■□□□□ 0.73
PTBP1-204ENST00000394601 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.73
PTBP1-204ENST00000394601 PTCH1Q13635 1447 aa19.64■□□□□ 0.73
PTBP1-204ENST00000394601 TNRQ92752 1358 aa19.64■□□□□ 0.73
PTBP1-204ENST00000394601 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
PTBP1-204ENST00000394601 ZBTB7CA1YPR0 619 aa19.63■□□□□ 0.73
PTBP1-204ENST00000394601 TSPYL6Q8N831 410 aa19.63■□□□□ 0.73
PTBP1-204ENST00000394601 KIF16BQ96L93 1317 aa19.62■□□□□ 0.73
PTBP1-204ENST00000394601 ITPRIPQ8IWB1 547 aa19.62■□□□□ 0.73
PTBP1-204ENST00000394601 MRPL50Q8N5N7 158 aaKnown RBP19.61■□□□□ 0.73
PTBP1-204ENST00000394601 RRS1Q15050 365 aaKnown RBP19.6■□□□□ 0.73
PTBP1-204ENST00000394601 OVOS2A0A0J9YW53 1432 aa19.6■□□□□ 0.73
PTBP1-204ENST00000394601 OVOS2Q6IE36 1432 aa19.6■□□□□ 0.73
PTBP1-204ENST00000394601 ZNF428Q96B54 188 aa19.6■□□□□ 0.73
PTBP1-204ENST00000394601 PTPRUQ92729 1446 aa19.6■□□□□ 0.73
PTBP1-204ENST00000394601 MBIPQ9NS73 344 aa19.59■□□□□ 0.73
PTBP1-204ENST00000394601 IFT57Q9NWB7 429 aa19.59■□□□□ 0.73
PTBP1-204ENST00000394601 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
PTBP1-204ENST00000394601 ANTXR1Q9H6X2 564 aa19.58■□□□□ 0.73
PTBP1-204ENST00000394601 GOLGA6L3A6NEY3 463 aa19.58■□□□□ 0.72
PTBP1-204ENST00000394601 ZBTB7BO15156 539 aaPredicted RBP19.58■□□□□ 0.72
PTBP1-204ENST00000394601 LTKP29376 864 aa19.58■□□□□ 0.72
PTBP1-204ENST00000394601 PLEKHG1Q9ULL1 1385 aa19.56■□□□□ 0.72
PTBP1-204ENST00000394601 ARHGAP45Q92619 1136 aa19.56■□□□□ 0.72
PTBP1-204ENST00000394601 NUCB1Q02818 461 aa19.56■□□□□ 0.72
PTBP1-204ENST00000394601 ABCC4O15439 1325 aa19.55■□□□□ 0.72
PTBP1-204ENST00000394601 IPO8O15397 1037 aaKnown RBP19.55■□□□□ 0.72
PTBP1-204ENST00000394601 COG3Q96JB2 828 aa19.55■□□□□ 0.72
PTBP1-204ENST00000394601 XRCC6P12956 609 aaKnown RBP eCLIP19.55■□□□□ 0.725e-10■□□□□ 9.2
PTBP1-204ENST00000394601 FAM83GA6ND36 823 aa19.54■□□□□ 0.72
PTBP1-204ENST00000394601 RBM10P98175 930 aaKnown RBP19.54■□□□□ 0.72
PTBP1-204ENST00000394601 L1TD1Q5T7N2 865 aaKnown RBP19.54■□□□□ 0.72
PTBP1-204ENST00000394601 C8orf58Q8NAV2 365 aa19.54■□□□□ 0.72
PTBP1-204ENST00000394601 CFAP44Q96MT7 982 aa19.54■□□□□ 0.72
PTBP1-204ENST00000394601 ZNF692Q9BU19 519 aaPredicted RBP19.54■□□□□ 0.72
PTBP1-204ENST00000394601 SIRT2Q8IXJ6 389 aa19.53■□□□□ 0.72
PTBP1-204ENST00000394601 USP6P35125 1406 aa19.53■□□□□ 0.72
PTBP1-204ENST00000394601 USP31Q70CQ4 1352 aa19.53■□□□□ 0.72
PTBP1-204ENST00000394601 PLEKHG3A1L390 1219 aa19.53■□□□□ 0.72
PTBP1-204ENST00000394601 GNAI1P63096 354 aa19.53■□□□□ 0.72
PTBP1-204ENST00000394601 TTC21BQ7Z4L5 1316 aa19.53■□□□□ 0.72
PTBP1-204ENST00000394601 FMN2Q9NZ56 1722 aa19.52■□□□□ 0.72
PTBP1-204ENST00000394601 RGPD8O14715 1765 aaPredicted RBP19.52■□□□□ 0.72
PTBP1-204ENST00000394601 TRIM44Q96DX7 344 aaPredicted RBP19.52■□□□□ 0.72
PTBP1-204ENST00000394601 TBC1D2Q9BYX2 928 aa19.52■□□□□ 0.72
PTBP1-204ENST00000394601 SLIT1O75093 1534 aa19.52■□□□□ 0.72
PTBP1-204ENST00000394601 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.71
PTBP1-204ENST00000394601 BECN1Q14457 450 aa19.52■□□□□ 0.71
PTBP1-204ENST00000394601 AEBP1Q8IUX7 1158 aa19.52■□□□□ 0.71
PTBP1-204ENST00000394601 ARHGAP23Q9P227 1491 aa19.52■□□□□ 0.71
PTBP1-204ENST00000394601 RGS12O14924 1447 aa19.51■□□□□ 0.71
PTBP1-204ENST00000394601 MARF1Q9Y4F3 1742 aaKnown RBP19.51■□□□□ 0.71
PTBP1-204ENST00000394601 ACEP12821 1306 aa19.51■□□□□ 0.71
PTBP1-204ENST00000394601 HDGFP51858 240 aaKnown RBP19.5■□□□□ 0.71
PTBP1-204ENST00000394601 CALD1Q05682 793 aaKnown RBP19.5■□□□□ 0.71
PTBP1-204ENST00000394601 DCTN1Q14203 1278 aa19.5■□□□□ 0.71
PTBP1-204ENST00000394601 RIMS1Q86UR5 1692 aaKnown RBP19.48■□□□□ 0.71
PTBP1-204ENST00000394601 TWISTNBQ3B726 338 aaPredicted RBP19.48■□□□□ 0.71
PTBP1-204ENST00000394601 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
PTBP1-204ENST00000394601 CHD1LQ86WJ1 897 aa19.47■□□□□ 0.71
PTBP1-204ENST00000394601 PIK3C2AO00443 1686 aa19.47■□□□□ 0.71
PTBP1-204ENST00000394601 ELL2O00472 640 aaPredicted RBP19.46■□□□□ 0.71
PTBP1-204ENST00000394601 XRN1Q8IZH2 1706 aaKnown RBP19.46■□□□□ 0.71
PTBP1-204ENST00000394601 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
PTBP1-204ENST00000394601 CRB1P82279 1406 aa19.45■□□□□ 0.7
PTBP1-204ENST00000394601 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms