RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 XPCQ01831 940 aaPredicted RBP23.31■■□□□ 1.32
CLDND1-204ENST00000394185 NFE2L2Q16236 605 aa23.31■■□□□ 1.32
CLDND1-204ENST00000394185 SULT6B1Q6IMI4 303 aa23.31■■□□□ 1.32
CLDND1-204ENST00000394185 THUMPD2Q9BTF0 503 aaKnown RBP23.31■■□□□ 1.32
CLDND1-204ENST00000394185 FOXO3O43524 673 aa23.3■■□□□ 1.32
CLDND1-204ENST00000394185 NEFMP07197 916 aa23.3■■□□□ 1.32
CLDND1-204ENST00000394185 PSME1Q06323 249 aa23.3■■□□□ 1.32
CLDND1-204ENST00000394185 SBNO1A3KN83 1393 aa23.29■■□□□ 1.32
CLDND1-204ENST00000394185 RARSP54136 660 aaKnown RBP23.28■■□□□ 1.32
CLDND1-204ENST00000394185 BCL2L13Q9BXK5 485 aa23.28■■□□□ 1.32
CLDND1-204ENST00000394185 FLT4P35916 1363 aa23.28■■□□□ 1.32
CLDND1-204ENST00000394185 TMEM94Q12767 1356 aa23.28■■□□□ 1.32
CLDND1-204ENST00000394185 AMPHP49418 695 aa23.27■■□□□ 1.32
CLDND1-204ENST00000394185 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.27■■□□□ 1.32
CLDND1-204ENST00000394185 C19orf44Q9H6X5 657 aa23.27■■□□□ 1.32
CLDND1-204ENST00000394185 LMTK3Q96Q04 1460 aa23.26■■□□□ 1.31
CLDND1-204ENST00000394185 RGPD1P0DJD0 1748 aa23.26■■□□□ 1.31
CLDND1-204ENST00000394185 EXOSC9Q06265 439 aaKnown RBP23.25■■□□□ 1.31
CLDND1-204ENST00000394185 IL16Q14005 1332 aa23.25■■□□□ 1.31
CLDND1-204ENST00000394185 USP54Q70EL1 1684 aa23.24■■□□□ 1.31
CLDND1-204ENST00000394185 FAM83GA6ND36 823 aa23.24■■□□□ 1.31
CLDND1-204ENST00000394185 C1orf167Q5SNV9 1468 aa23.24■■□□□ 1.31
CLDND1-204ENST00000394185 PLEKHG5O94827 1062 aa23.24■■□□□ 1.31
CLDND1-204ENST00000394185 HOXC9P31274 260 aa23.23■■□□□ 1.31
CLDND1-204ENST00000394185 FRAT1Q92837 279 aaPredicted RBP23.23■■□□□ 1.31
CLDND1-204ENST00000394185 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
CLDND1-204ENST00000394185 DCTN1Q14203 1278 aa23.22■■□□□ 1.31
CLDND1-204ENST00000394185 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
CLDND1-204ENST00000394185 EYA1Q99502 592 aa23.21■■□□□ 1.31
CLDND1-204ENST00000394185 TNNQ9UQP3 1299 aa23.21■■□□□ 1.31
CLDND1-204ENST00000394185 PANK1Q8TE04 598 aa23.19■■□□□ 1.3
CLDND1-204ENST00000394185 ARHGEF10O15013 1369 aa23.19■■□□□ 1.3
CLDND1-204ENST00000394185 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
CLDND1-204ENST00000394185 DDX17Q92841 729 aaKnown RBP23.18■■□□□ 1.3
CLDND1-204ENST00000394185 STRCQ7RTU9 1775 aa23.18■■□□□ 1.3
CLDND1-204ENST00000394185 LTV1Q96GA3 475 aaPredicted RBP23.18■■□□□ 1.3
CLDND1-204ENST00000394185 MST1RQ04912 1400 aa23.18■■□□□ 1.3
CLDND1-204ENST00000394185 NFAT5O94916 1531 aa23.18■■□□□ 1.3
CLDND1-204ENST00000394185 ATF3P18847 181 aa23.17■■□□□ 1.3
CLDND1-204ENST00000394185 LMOD2Q6P5Q4 547 aa23.17■■□□□ 1.3
CLDND1-204ENST00000394185 IGSF1Q8N6C5 1336 aa23.17■■□□□ 1.3
CLDND1-204ENST00000394185 KRT28Q7Z3Y7 464 aa23.16■■□□□ 1.3
CLDND1-204ENST00000394185 KDRP35968 1356 aa23.15■■□□□ 1.3
CLDND1-204ENST00000394185 ZBTB7CA1YPR0 619 aa23.15■■□□□ 1.3
CLDND1-204ENST00000394185 LTN1O94822 1766 aa23.15■■□□□ 1.3
CLDND1-204ENST00000394185 RLBP1P12271 317 aa23.14■■□□□ 1.3
CLDND1-204ENST00000394185 SSH1Q8WYL5 1049 aa23.14■■□□□ 1.29
CLDND1-204ENST00000394185 COG6Q9Y2V7 657 aa23.14■■□□□ 1.29
CLDND1-204ENST00000394185 KIF24Q5T7B8 1368 aa23.13■■□□□ 1.29
CLDND1-204ENST00000394185 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
CLDND1-204ENST00000394185 ZNF853P0CG23 659 aa23.13■■□□□ 1.29
CLDND1-204ENST00000394185 PDE3AQ14432 1141 aa23.13■■□□□ 1.29
CLDND1-204ENST00000394185 MCM10Q7L590 875 aa23.13■■□□□ 1.29
CLDND1-204ENST00000394185 MBIPQ9NS73 344 aa23.13■■□□□ 1.29
CLDND1-204ENST00000394185 CT47B1P0C2W7 299 aaPredicted RBP23.13■■□□□ 1.29
CLDND1-204ENST00000394185 LMOD3Q0VAK6 560 aa23.12■■□□□ 1.29
CLDND1-204ENST00000394185 MTHFSDQ2M296 383 aaKnown RBP23.12■■□□□ 1.29
CLDND1-204ENST00000394185 CLUAP1Q96AJ1 413 aa23.12■■□□□ 1.29
CLDND1-204ENST00000394185 SMC4Q9NTJ3 1288 aa23.12■■□□□ 1.29
CLDND1-204ENST00000394185 IFT57Q9NWB7 429 aa23.12■■□□□ 1.29
CLDND1-204ENST00000394185 USHBP1Q8N6Y0 703 aa23.11■■□□□ 1.29
CLDND1-204ENST00000394185 GCP02774 474 aa23.11■■□□□ 1.29
CLDND1-204ENST00000394185 TSPYL6Q8N831 410 aa23.11■■□□□ 1.29
CLDND1-204ENST00000394185 KIF1AQ12756 1690 aa23.11■■□□□ 1.29
CLDND1-204ENST00000394185 ZNF335Q9H4Z2 1342 aaPredicted RBP23.11■■□□□ 1.29
CLDND1-204ENST00000394185 DCCP43146 1447 aa23.1■■□□□ 1.29
CLDND1-204ENST00000394185 GNAI1P63096 354 aa23.1■■□□□ 1.29
CLDND1-204ENST00000394185 CALD1Q05682 793 aaKnown RBP23.1■■□□□ 1.29
CLDND1-204ENST00000394185 SKAP1Q86WV1 359 aa23.1■■□□□ 1.29
CLDND1-204ENST00000394185 IP6K1Q92551 441 aa23.1■■□□□ 1.29
CLDND1-204ENST00000394185 CFAP44Q96MT7 982 aa23.1■■□□□ 1.29
CLDND1-204ENST00000394185 RTL1A6NKG5 1358 aa23.1■■□□□ 1.29
CLDND1-204ENST00000394185 NCOA3Q9Y6Q9 1424 aa23.09■■□□□ 1.29
CLDND1-204ENST00000394185 KCNH5Q8NCM2 988 aa23.09■■□□□ 1.29
CLDND1-204ENST00000394185 XIRP1Q702N8 1843 aaKnown RBP23.09■■□□□ 1.29
CLDND1-204ENST00000394185 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.29
CLDND1-204ENST00000394185 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
CLDND1-204ENST00000394185 MSH6P52701 1360 aa23.07■■□□□ 1.28
CLDND1-204ENST00000394185 RBM19Q9Y4C8 960 aaKnown RBP23.07■■□□□ 1.28
CLDND1-204ENST00000394185 KDM2BQ8NHM5 1336 aa23.07■■□□□ 1.28
CLDND1-204ENST00000394185 SLIT3O75094 1523 aa23.06■■□□□ 1.28
CLDND1-204ENST00000394185 USP19O94966 1318 aa23.06■■□□□ 1.28
CLDND1-204ENST00000394185 NBPF6Q5VWK0 638 aa23.05■■□□□ 1.28
CLDND1-204ENST00000394185 ARHGEF25Q86VW2 580 aa23.05■■□□□ 1.28
CLDND1-204ENST00000394185 C8orf58Q8NAV2 365 aa23.05■■□□□ 1.28
CLDND1-204ENST00000394185 NBPF4Q96M43 638 aa23.05■■□□□ 1.28
CLDND1-204ENST00000394185 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
CLDND1-204ENST00000394185 VAMP4O75379 141 aa23.04■■□□□ 1.28
CLDND1-204ENST00000394185 TRIM27P14373 513 aa23.04■■□□□ 1.28
CLDND1-204ENST00000394185 ZKSCAN2Q63HK3 967 aa23.04■■□□□ 1.28
CLDND1-204ENST00000394185 LRRC59Q96AG4 307 aaKnown RBP23.03■■□□□ 1.28
CLDND1-204ENST00000394185 ALS2Q96Q42 1657 aa23.03■■□□□ 1.28
CLDND1-204ENST00000394185 TCERG1O14776 1098 aaKnown RBP23.03■■□□□ 1.28
CLDND1-204ENST00000394185 KRT24Q2M2I5 525 aa23.03■■□□□ 1.28
CLDND1-204ENST00000394185 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
CLDND1-204ENST00000394185 MED1Q15648 1581 aaPredicted RBP23.02■■□□□ 1.27
CLDND1-204ENST00000394185 CRB1P82279 1406 aa23.02■■□□□ 1.27
CLDND1-204ENST00000394185 MIS18AQ9NYP9 233 aa23.01■■□□□ 1.27
CLDND1-204ENST00000394185 PHRF1Q9P1Y6 1649 aaKnown RBP23.01■■□□□ 1.27
CLDND1-204ENST00000394185 TWISTNBQ3B726 338 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms