RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 YTHDC1Q96MU7 727 aaKnown RBP4.64□□□□□ -1.67
XRN1-202ENST00000392981 CDCA7Q9BWT1 371 aaPredicted RBP4.64□□□□□ -1.67
XRN1-202ENST00000392981 FBXO31Q5XUX0 539 aaPredicted RBP4.63□□□□□ -1.67
XRN1-202ENST00000392981 DPY19L2Q6NUT2 758 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 FMNL3Q8IVF7 1028 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 CPLX3Q8WVH0 158 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 SRPK1Q96SB4 655 aaKnown RBP4.63□□□□□ -1.67
XRN1-202ENST00000392981 DCTN4Q9UJW0 460 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 PNMA2Q9UL42 364 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 PCDHGB7Q9Y5F8 929 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 LDHBP07195 334 aaKnown RBP4.63□□□□□ -1.67
XRN1-202ENST00000392981 CRTC2Q53ET0 693 aaPredicted RBP4.63□□□□□ -1.67
XRN1-202ENST00000392981 NPAS4Q8IUM7 802 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 CNGB1Q14028 1251 aaPredicted RBP4.63□□□□□ -1.67
XRN1-202ENST00000392981 L3MBTL3Q96JM7 780 aaPredicted RBP4.63□□□□□ -1.67
XRN1-202ENST00000392981 CREB3O43889 395 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 GUCA2AQ02747 115 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 PPP1R18Q6NYC8 613 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 EPS8L1Q8TE68 723 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 AKT1S1Q96B36 256 aa4.63□□□□□ -1.67
XRN1-202ENST00000392981 GIGYF1O75420 1035 aaPredicted RBP4.62□□□□□ -1.67
XRN1-202ENST00000392981 SSFA2P28290 1259 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 RAB15P59190 212 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 CCDC181Q5TID7 509 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 ZMIZ1Q9ULJ6 1067 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 NOP58Q9Y2X3 529 aaKnown RBP4.62□□□□□ -1.67
XRN1-202ENST00000392981 CCDC61Q9Y6R9 512 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 DNAJC6O75061 913 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 ZFYVE27Q5T4F4 411 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 OGFOD1Q8N543 542 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 TCERG1O14776 1098 aaKnown RBP4.62□□□□□ -1.67
XRN1-202ENST00000392981 KCNH2Q12809 1159 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 ANKMY2Q8IV38 441 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 MICALL2Q8IY33 904 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 DUSP9Q99956 384 aaKnown RBP4.62□□□□□ -1.67
XRN1-202ENST00000392981 PPP2R2DQ66LE6 453 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 GTF3C2Q8WUA4 911 aaPredicted RBP4.62□□□□□ -1.67
XRN1-202ENST00000392981 SPACA7Q96KW9 195 aa4.62□□□□□ -1.67
XRN1-202ENST00000392981 KIF4AO95239 1232 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 SLC4A3P48751 1232 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 SLC4A10Q6U841 1118 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 ALG2Q9H553 416 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.61□□□□□ -1.67
XRN1-202ENST00000392981 PRKAR2AP13861 404 aaKnown RBP4.61□□□□□ -1.67
XRN1-202ENST00000392981 MTMR2Q13614 643 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 PKNOX2Q96KN3 472 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 HDGFP51858 240 aaKnown RBP4.61□□□□□ -1.67
XRN1-202ENST00000392981 SUGT1Q9Y2Z0 365 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 CCDC180Q9P1Z9 1646 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 SPTLC1O15269 473 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 PDE6BP35913 854 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 PRIM1P49642 420 aaKnown RBP4.61□□□□□ -1.67
XRN1-202ENST00000392981 EML3Q32P44 896 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 FERMT3Q86UX7 667 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 SLAIN1Q8ND83 568 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 PHF12Q96QT6 1004 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 OSBPL2Q9H1P3 480 aa4.61□□□□□ -1.67
XRN1-202ENST00000392981 PARNO95453 639 aaKnown RBP4.6□□□□□ -1.67
XRN1-202ENST00000392981 AGERQ15109 404 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 CADPSQ9ULU8 1353 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 RCCD1A6NED2 376 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 ANP32CO43423 234 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 PAX3P23760 479 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 EN1Q05925 392 aaPredicted RBP4.6□□□□□ -1.67
XRN1-202ENST00000392981 GAS2L2Q8NHY3 880 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 ATP5J2-PTCD1G3V325 749 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 L1TD1Q5T7N2 865 aaKnown RBP4.6□□□□□ -1.67
XRN1-202ENST00000392981 TPCN2Q8NHX9 752 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 PIF1Q9H611 641 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 SPC25Q9HBM1 224 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 IFT57Q9NWB7 429 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 PARP2Q9UGN5 583 aa4.6□□□□□ -1.67
XRN1-202ENST00000392981 ODR4Q5SWX8 454 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 PXYLP1Q8TE99 480 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 IGSF5Q9NSI5 407 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 SEPT3Q9UH03 358 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 GGT7Q9UJ14 662 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 MRVI1Q9Y6F6 885 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 ATP1A2P50993 1020 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 PPP2R5AQ15172 486 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 NFE2L2Q16236 605 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 FBXW10Q5XX13 1052 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 ZNF454Q8N9F8 522 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 DNAAF2Q9NVR5 837 aaKnown RBP4.59□□□□□ -1.67
XRN1-202ENST00000392981 PDILTQ8N807 584 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 KIF12Q96FN5 646 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 CYLDQ9NQC7 956 aa4.59□□□□□ -1.67
XRN1-202ENST00000392981 SOGA3Q5TF21 947 aa4.59□□□□□ -1.68
XRN1-202ENST00000392981 GPATCH3Q96I76 525 aa4.59□□□□□ -1.68
XRN1-202ENST00000392981 TERF2IPQ9NYB0 399 aa4.59□□□□□ -1.68
XRN1-202ENST00000392981 K7ELQ4 463 aaPredicted RBP4.59□□□□□ -1.68
XRN1-202ENST00000392981 PLCB3Q01970 1234 aa4.59□□□□□ -1.68
XRN1-202ENST00000392981 TCEAL1Q15170 157 aa4.59□□□□□ -1.68
XRN1-202ENST00000392981 TYW1BQ6NUM6 668 aa4.59□□□□□ -1.68
XRN1-202ENST00000392981 EPAS1Q99814 870 aa4.59□□□□□ -1.68
XRN1-202ENST00000392981 MAGEC2Q9UBF1 373 aaPredicted RBP4.59□□□□□ -1.68
XRN1-202ENST00000392981 LILRB3O75022 631 aa4.58□□□□□ -1.68
XRN1-202ENST00000392981 PRR12Q9ULL5 1215 aa4.58□□□□□ -1.68
XRN1-202ENST00000392981 PITPNM1O00562 1244 aa4.58□□□□□ -1.68
XRN1-202ENST00000392981 USP48Q86UV5 1035 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms