RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 SSH1Q8WYL5 1049 aa18.93■□□□□ 0.62
SHTN1-204ENST00000392903 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
SHTN1-204ENST00000392903 MRE11P49959 708 aa18.93■□□□□ 0.62
SHTN1-204ENST00000392903 ZKSCAN2Q63HK3 967 aa18.93■□□□□ 0.62
SHTN1-204ENST00000392903 FTSJ3Q8IY81 847 aaKnown RBP18.93■□□□□ 0.62
SHTN1-204ENST00000392903 COG3Q96JB2 828 aa18.93■□□□□ 0.62
SHTN1-204ENST00000392903 UBR1Q8IWV7 1749 aa18.92■□□□□ 0.62
SHTN1-204ENST00000392903 THUMPD2Q9BTF0 503 aaKnown RBP18.92■□□□□ 0.62
SHTN1-204ENST00000392903 FAM135BQ49AJ0 1406 aa18.92■□□□□ 0.62
SHTN1-204ENST00000392903 DZIP1LQ8IYY4 767 aaKnown RBP18.91■□□□□ 0.62
SHTN1-204ENST00000392903 PMFBP1Q8TBY8 1022 aa18.91■□□□□ 0.62
SHTN1-204ENST00000392903 SIRT1Q96EB6 747 aa18.91■□□□□ 0.62
SHTN1-204ENST00000392903 LRRC7Q96NW7 1537 aa18.91■□□□□ 0.62
SHTN1-204ENST00000392903 CPS1P31327 1500 aa18.9■□□□□ 0.62
SHTN1-204ENST00000392903 ISY1Q9ULR0 285 aaKnown RBP18.9■□□□□ 0.62
SHTN1-204ENST00000392903 IL13P35225 146 aa18.9■□□□□ 0.62
SHTN1-204ENST00000392903 ARXQ96QS3 562 aa18.9■□□□□ 0.62
SHTN1-204ENST00000392903 ADAMTS13Q76LX8 1427 aa18.89■□□□□ 0.61
SHTN1-204ENST00000392903 CT47B1P0C2W7 299 aaPredicted RBP18.89■□□□□ 0.61
SHTN1-204ENST00000392903 MVPQ14764 893 aaKnown RBP18.89■□□□□ 0.61
SHTN1-204ENST00000392903 TECPR2O15040 1411 aa18.89■□□□□ 0.61
SHTN1-204ENST00000392903 IL16Q14005 1332 aa18.89■□□□□ 0.61
SHTN1-204ENST00000392903 TRAK2O60296 914 aa18.89■□□□□ 0.61
SHTN1-204ENST00000392903 TRIM27P14373 513 aa18.89■□□□□ 0.61
SHTN1-204ENST00000392903 CHMP5Q9NZZ3 219 aa18.89■□□□□ 0.61
SHTN1-204ENST00000392903 NOB1Q9ULX3 412 aaKnown RBP18.89■□□□□ 0.61
SHTN1-204ENST00000392903 GZF1Q9H116 711 aaPredicted RBP18.88■□□□□ 0.61
SHTN1-204ENST00000392903 ZNF692Q9BU19 519 aaPredicted RBP18.87■□□□□ 0.61
SHTN1-204ENST00000392903 CDC42BPGQ6DT37 1551 aa18.86■□□□□ 0.61
SHTN1-204ENST00000392903 NFE2L2Q16236 605 aa18.86■□□□□ 0.61
SHTN1-204ENST00000392903 EID1Q9Y6B2 187 aa18.86■□□□□ 0.61
SHTN1-204ENST00000392903 ACEP12821 1306 aa18.86■□□□□ 0.61
SHTN1-204ENST00000392903 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
SHTN1-204ENST00000392903 ESPNB1AK53 854 aa18.85■□□□□ 0.61
SHTN1-204ENST00000392903 ITPRIPQ8IWB1 547 aa18.85■□□□□ 0.61
SHTN1-204ENST00000392903 SOX12O15370 315 aa18.85■□□□□ 0.61
SHTN1-204ENST00000392903 ATF7IPQ6VMQ6 1270 aa18.85■□□□□ 0.61
SHTN1-204ENST00000392903 GRPEL1Q9HAV7 217 aa18.85■□□□□ 0.61
SHTN1-204ENST00000392903 ELL2O00472 640 aaPredicted RBP18.84■□□□□ 0.61
SHTN1-204ENST00000392903 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
SHTN1-204ENST00000392903 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.61
SHTN1-204ENST00000392903 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
SHTN1-204ENST00000392903 AMOTL2Q9Y2J4 779 aa18.83■□□□□ 0.61
SHTN1-204ENST00000392903 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.61
SHTN1-204ENST00000392903 AATKQ6ZMQ8 1374 aa18.83■□□□□ 0.6
SHTN1-204ENST00000392903 DDX11L8A8MPP1 907 aa18.83■□□□□ 0.6
SHTN1-204ENST00000392903 MON2Q7Z3U7 1717 aa18.82■□□□□ 0.6
SHTN1-204ENST00000392903 FAM83GA6ND36 823 aa18.82■□□□□ 0.6
SHTN1-204ENST00000392903 TTC21BQ7Z4L5 1316 aa18.82■□□□□ 0.6
SHTN1-204ENST00000392903 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
SHTN1-204ENST00000392903 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
SHTN1-204ENST00000392903 CDK12Q9NYV4 1490 aaPredicted RBP18.81■□□□□ 0.6
SHTN1-204ENST00000392903 ITSN1Q15811 1721 aa18.81■□□□□ 0.6
SHTN1-204ENST00000392903 DCTN1Q14203 1278 aa18.8■□□□□ 0.6
SHTN1-204ENST00000392903 TSPYL6Q8N831 410 aa18.8■□□□□ 0.6
SHTN1-204ENST00000392903 SPRYD3Q8NCJ5 442 aa18.8■□□□□ 0.6
SHTN1-204ENST00000392903 ERBB4Q15303 1308 aa18.8■□□□□ 0.6
SHTN1-204ENST00000392903 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
SHTN1-204ENST00000392903 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
SHTN1-204ENST00000392903 DDX19BQ9UMR2 479 aa18.79■□□□□ 0.6
SHTN1-204ENST00000392903 C3P01024 1663 aa18.79■□□□□ 0.6
SHTN1-204ENST00000392903 C22orf23Q9BZE7 217 aa18.79■□□□□ 0.6
SHTN1-204ENST00000392903 IPO8O15397 1037 aaKnown RBP18.78■□□□□ 0.6
SHTN1-204ENST00000392903 TPM2P07951 284 aa18.78■□□□□ 0.6
SHTN1-204ENST00000392903 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
SHTN1-204ENST00000392903 TRHP20396 242 aaPredicted RBP18.78■□□□□ 0.6
SHTN1-204ENST00000392903 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
SHTN1-204ENST00000392903 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
SHTN1-204ENST00000392903 EIF4A2Q14240 407 aaKnown RBP18.77■□□□□ 0.6
SHTN1-204ENST00000392903 HSP90AB2PQ58FF8 381 aa18.77■□□□□ 0.6
SHTN1-204ENST00000392903 KIF16BQ96L93 1317 aa18.77■□□□□ 0.6
SHTN1-204ENST00000392903 NCOA3Q9Y6Q9 1424 aa18.77■□□□□ 0.6
SHTN1-204ENST00000392903 VAMP4O75379 141 aa18.76■□□□□ 0.59
SHTN1-204ENST00000392903 GNAI1P63096 354 aa18.76■□□□□ 0.59
SHTN1-204ENST00000392903 ALDH1L2Q3SY69 923 aa18.76■□□□□ 0.59
SHTN1-204ENST00000392903 CALD1Q05682 793 aaKnown RBP18.75■□□□□ 0.59
SHTN1-204ENST00000392903 DDIT3P35638 169 aa18.75■□□□□ 0.59
SHTN1-204ENST00000392903 TRIM44Q96DX7 344 aaPredicted RBP18.75■□□□□ 0.59
SHTN1-204ENST00000392903 IFT57Q9NWB7 429 aa18.75■□□□□ 0.59
SHTN1-204ENST00000392903 THEMISQ8N1K5 641 aaPredicted RBP18.74■□□□□ 0.59
SHTN1-204ENST00000392903 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
SHTN1-204ENST00000392903 USP6P35125 1406 aa18.74■□□□□ 0.59
SHTN1-204ENST00000392903 ZNF853P0CG23 659 aa18.73■□□□□ 0.59
SHTN1-204ENST00000392903 C8orf58Q8NAV2 365 aa18.73■□□□□ 0.59
SHTN1-204ENST00000392903 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
SHTN1-204ENST00000392903 ZBTB40Q9NUA8 1239 aa18.73■□□□□ 0.59
SHTN1-204ENST00000392903 TBX22Q9Y458 520 aa18.73■□□□□ 0.59
SHTN1-204ENST00000392903 HSCBQ8IWL3 235 aa18.73■□□□□ 0.59
SHTN1-204ENST00000392903 CFAP44Q96MT7 982 aa18.73■□□□□ 0.59
SHTN1-204ENST00000392903 TWISTNBQ3B726 338 aaPredicted RBP18.72■□□□□ 0.59
SHTN1-204ENST00000392903 PDCL3Q9H2J4 239 aa18.72■□□□□ 0.59
SHTN1-204ENST00000392903 LMOD3Q0VAK6 560 aa18.71■□□□□ 0.59
SHTN1-204ENST00000392903 MRPL50Q8N5N7 158 aaKnown RBP18.71■□□□□ 0.59
SHTN1-204ENST00000392903 MFAP1P55081 439 aaKnown RBP18.71■□□□□ 0.59
SHTN1-204ENST00000392903 HDAC1Q13547 482 aaPredicted RBP18.7■□□□□ 0.58
SHTN1-204ENST00000392903 OVOS2A0A0J9YW53 1432 aa18.7■□□□□ 0.58
SHTN1-204ENST00000392903 OVOS2Q6IE36 1432 aa18.7■□□□□ 0.58
SHTN1-204ENST00000392903 MCM10Q7L590 875 aa18.7■□□□□ 0.58
SHTN1-204ENST00000392903 ZNF428Q96B54 188 aa18.7■□□□□ 0.58
SHTN1-204ENST00000392903 CIZ1Q9ULV3 898 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms