RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ABCC11Q96J66 1382 aa20.12■□□□□ 0.81
SCN3B-202ENST00000392770 TRDNQ13061 729 aa20.12■□□□□ 0.81
SCN3B-202ENST00000392770 GSE1Q14687 1217 aa20.12■□□□□ 0.81
SCN3B-202ENST00000392770 WASHC4Q2M389 1173 aa20.12■□□□□ 0.81
SCN3B-202ENST00000392770 TMEM57Q8N5G2 664 aa20.12■□□□□ 0.81
SCN3B-202ENST00000392770 USHBP1Q8N6Y0 703 aa20.12■□□□□ 0.81
SCN3B-202ENST00000392770 FBXW7Q969H0 707 aa20.11■□□□□ 0.81
SCN3B-202ENST00000392770 DNAJC2Q99543 621 aaKnown RBP20.11■□□□□ 0.81
SCN3B-202ENST00000392770 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
SCN3B-202ENST00000392770 ANKRD36BQ8N2N9 1353 aa20.11■□□□□ 0.81
SCN3B-202ENST00000392770 SMC3Q9UQE7 1217 aa20.1■□□□□ 0.81
SCN3B-202ENST00000392770 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
SCN3B-202ENST00000392770 ADGRL2O95490 1459 aa20.1■□□□□ 0.81
SCN3B-202ENST00000392770 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
SCN3B-202ENST00000392770 UHRF1BP1LA0JNW5 1464 aa20.1■□□□□ 0.81
SCN3B-202ENST00000392770 RARSP54136 660 aaKnown RBP20.1■□□□□ 0.81
SCN3B-202ENST00000392770 CPLX1O14810 134 aa20.09■□□□□ 0.81
SCN3B-202ENST00000392770 CPLX2Q6PUV4 134 aaKnown RBP20.09■□□□□ 0.81
SCN3B-202ENST00000392770 ARHGEF12Q9NZN5 1544 aa20.09■□□□□ 0.81
SCN3B-202ENST00000392770 MAGI3Q5TCQ9 1506 aa20.09■□□□□ 0.81
SCN3B-202ENST00000392770 TRIM29Q14134 588 aa20.09■□□□□ 0.81
SCN3B-202ENST00000392770 NFXL1Q6ZNB6 911 aa20.09■□□□□ 0.81
SCN3B-202ENST00000392770 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
SCN3B-202ENST00000392770 ADGBQ8N7X0 1667 aa20.08■□□□□ 0.81
SCN3B-202ENST00000392770 C20orf194Q5TEA3 1177 aa20.08■□□□□ 0.81
SCN3B-202ENST00000392770 NUCB2P80303 420 aa20.07■□□□□ 0.8
SCN3B-202ENST00000392770 ACEP12821 1306 aa20.07■□□□□ 0.8
SCN3B-202ENST00000392770 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
SCN3B-202ENST00000392770 SIL1Q9H173 461 aa20.07■□□□□ 0.8
SCN3B-202ENST00000392770 MARCH6O60337 910 aa20.06■□□□□ 0.8
SCN3B-202ENST00000392770 VPS37CA5D8V6 355 aaPredicted RBP20.06■□□□□ 0.8
SCN3B-202ENST00000392770 ALDH1L2Q3SY69 923 aa20.06■□□□□ 0.8
SCN3B-202ENST00000392770 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
SCN3B-202ENST00000392770 BACH2Q9BYV9 841 aa20.06■□□□□ 0.8
SCN3B-202ENST00000392770 CREBRFQ8IUR6 639 aa20.06■□□□□ 0.8
SCN3B-202ENST00000392770 VPS53Q5VIR6 699 aa20.05■□□□□ 0.8
SCN3B-202ENST00000392770 ERICH2A1L162 156 aa20.05■□□□□ 0.8
SCN3B-202ENST00000392770 FOSBP53539 338 aa20.05■□□□□ 0.8
SCN3B-202ENST00000392770 FOXO3O43524 673 aa20.05■□□□□ 0.8
SCN3B-202ENST00000392770 TRIM34Q9BYJ4 488 aa20.05■□□□□ 0.8
SCN3B-202ENST00000392770 PSMA5P28066 241 aa20.04■□□□□ 0.8
SCN3B-202ENST00000392770 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
SCN3B-202ENST00000392770 PPIP5K1Q6PFW1 1433 aa20.04■□□□□ 0.8
SCN3B-202ENST00000392770 MAP4K4O95819 1239 aaPredicted RBP20.04■□□□□ 0.8
SCN3B-202ENST00000392770 HIP1O00291 1037 aa20.04■□□□□ 0.8
SCN3B-202ENST00000392770 GCC2Q8IWJ2 1684 aa20.04■□□□□ 0.8
SCN3B-202ENST00000392770 PIP4K2BP78356 416 aa20.03■□□□□ 0.8
SCN3B-202ENST00000392770 TTC39AQ5SRH9 613 aa20.03■□□□□ 0.8
SCN3B-202ENST00000392770 RALYLQ86SE5 291 aaKnown RBP20.03■□□□□ 0.8
SCN3B-202ENST00000392770 TTC21BQ7Z4L5 1316 aa20.03■□□□□ 0.8
SCN3B-202ENST00000392770 FYB1O15117 783 aa20.03■□□□□ 0.8
SCN3B-202ENST00000392770 RAD21O60216 631 aa20.03■□□□□ 0.8
SCN3B-202ENST00000392770 CNNM1Q9NRU3 951 aa20.02■□□□□ 0.8
SCN3B-202ENST00000392770 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
SCN3B-202ENST00000392770 SRGAP3O43295 1099 aa20.02■□□□□ 0.79
SCN3B-202ENST00000392770 AMOTQ4VCS5 1084 aa20.01■□□□□ 0.79
SCN3B-202ENST00000392770 AMER1Q5JTC6 1135 aaPredicted RBP20.01■□□□□ 0.79
SCN3B-202ENST00000392770 RPAP2Q8IXW5 612 aaPredicted RBP20.01■□□□□ 0.79
SCN3B-202ENST00000392770 TBC1D2BQ9UPU7 963 aa20.01■□□□□ 0.79
SCN3B-202ENST00000392770 LRPPRCP42704 1394 aaKnown RBP20■□□□□ 0.79
SCN3B-202ENST00000392770 NFKBIBQ15653 356 aa20■□□□□ 0.79
SCN3B-202ENST00000392770 FBLN1P23142 703 aa20■□□□□ 0.79
SCN3B-202ENST00000392770 RABEP1Q15276 862 aa20■□□□□ 0.79
SCN3B-202ENST00000392770 CCDC158Q5M9N0 1113 aa19.99■□□□□ 0.79
SCN3B-202ENST00000392770 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
SCN3B-202ENST00000392770 NEK4P51957 841 aa19.99■□□□□ 0.79
SCN3B-202ENST00000392770 KRT28Q7Z3Y7 464 aa19.99■□□□□ 0.79
SCN3B-202ENST00000392770 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.99■□□□□ 0.79
SCN3B-202ENST00000392770 BICD2Q8TD16 824 aa19.99■□□□□ 0.79
SCN3B-202ENST00000392770 AACSQ86V21 672 aa19.98■□□□□ 0.79
SCN3B-202ENST00000392770 GOLGA6L19H0YKK7 550 aa19.98■□□□□ 0.79
SCN3B-202ENST00000392770 MPRIPQ6WCQ1 1025 aa19.98■□□□□ 0.79
SCN3B-202ENST00000392770 TESK2Q96S53 571 aa19.98■□□□□ 0.79
SCN3B-202ENST00000392770 ABCC1P33527 1531 aa19.97■□□□□ 0.79
SCN3B-202ENST00000392770 MYO5CQ9NQX4 1742 aa19.96■□□□□ 0.79
SCN3B-202ENST00000392770 DHX16O60231 1041 aaKnown RBP19.96■□□□□ 0.79
SCN3B-202ENST00000392770 IL1RAPL2Q9NP60 686 aa19.96■□□□□ 0.79
SCN3B-202ENST00000392770 TPD52L1Q16890 204 aaPredicted RBP19.96■□□□□ 0.79
SCN3B-202ENST00000392770 BECN2A8MW95 431 aa19.95■□□□□ 0.78
SCN3B-202ENST00000392770 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
SCN3B-202ENST00000392770 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.95■□□□□ 0.78
SCN3B-202ENST00000392770 CCDC57Q2TAC2 916 aa19.94■□□□□ 0.78
SCN3B-202ENST00000392770 UHRF1BP1Q6BDS2 1440 aa19.94■□□□□ 0.78
SCN3B-202ENST00000392770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.78
SCN3B-202ENST00000392770 MBIPQ9NS73 344 aa19.94■□□□□ 0.78
SCN3B-202ENST00000392770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.94■□□□□ 0.78
SCN3B-202ENST00000392770 ARHGEF5Q12774 1597 aa19.93■□□□□ 0.78
SCN3B-202ENST00000392770 TRIM27P14373 513 aa19.93■□□□□ 0.78
SCN3B-202ENST00000392770 MCM2P49736 904 aa19.93■□□□□ 0.78
SCN3B-202ENST00000392770 ABCA8O94911 1581 aa19.93■□□□□ 0.78
SCN3B-202ENST00000392770 TTC21AQ8NDW8 1320 aa19.93■□□□□ 0.78
SCN3B-202ENST00000392770 F6X3S4 739 aa19.92■□□□□ 0.78
SCN3B-202ENST00000392770 EXOC6BQ9Y2D4 811 aa19.92■□□□□ 0.78
SCN3B-202ENST00000392770 ZMYM3Q14202 1370 aa19.92■□□□□ 0.78
SCN3B-202ENST00000392770 SKAP1Q86WV1 359 aa19.92■□□□□ 0.78
SCN3B-202ENST00000392770 NUTM1Q86Y26 1132 aa19.92■□□□□ 0.78
SCN3B-202ENST00000392770 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
SCN3B-202ENST00000392770 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
SCN3B-202ENST00000392770 IL16Q14005 1332 aa19.91■□□□□ 0.78
SCN3B-202ENST00000392770 SMARCA5O60264 1052 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms