RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TCP11L2Q8N4U5 519 aa19.09■□□□□ 0.65
SHANK1-204ENST00000391814 C16orf45Q96MC5 204 aaPredicted RBP19.08■□□□□ 0.65
SHANK1-204ENST00000391814 TIGD1Q96MW7 591 aa19.08■□□□□ 0.65
SHANK1-204ENST00000391814 SURF6O75683 361 aaKnown RBP19.08■□□□□ 0.64
SHANK1-204ENST00000391814 SSFA2P28290 1259 aa19.08■□□□□ 0.64
SHANK1-204ENST00000391814 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
SHANK1-204ENST00000391814 AIMP1Q12904 312 aaKnown RBP19.07■□□□□ 0.64
SHANK1-204ENST00000391814 RNF187Q5TA31 235 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-204ENST00000391814 TNPO1Q92973 898 aaKnown RBP19.07■□□□□ 0.64
SHANK1-204ENST00000391814 DDX11Q96FC9 970 aa19.07■□□□□ 0.64
SHANK1-204ENST00000391814 CCDC148Q8NFR7 591 aa19.07■□□□□ 0.64
SHANK1-204ENST00000391814 CEP57L1Q8IYX8 460 aa19.07■□□□□ 0.64
SHANK1-204ENST00000391814 MVPQ14764 893 aaKnown RBP19.07■□□□□ 0.64
SHANK1-204ENST00000391814 VPS37DQ86XT2 251 aa19.07■□□□□ 0.64
SHANK1-204ENST00000391814 CCDC183Q5T5S1 534 aa19.06■□□□□ 0.64
SHANK1-204ENST00000391814 KIF18AQ8NI77 898 aa19.06■□□□□ 0.64
SHANK1-204ENST00000391814 PDRG1Q9NUG6 133 aa19.06■□□□□ 0.64
SHANK1-204ENST00000391814 TRMT1Q9NXH9 659 aaKnown RBP19.06■□□□□ 0.64
SHANK1-204ENST00000391814 CLIP2Q9UDT6 1046 aa19.06■□□□□ 0.64
SHANK1-204ENST00000391814 PIP4K2AP48426 406 aaPredicted RBP19.06■□□□□ 0.64
SHANK1-204ENST00000391814 MIA2Q96PC5 1412 aa19.06■□□□□ 0.64
SHANK1-204ENST00000391814 URI1O94763 535 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-204ENST00000391814 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
SHANK1-204ENST00000391814 USP25Q9UHP3 1055 aa19.05■□□□□ 0.64
SHANK1-204ENST00000391814 CRACR2AQ9BSW2 395 aa19.05■□□□□ 0.64
SHANK1-204ENST00000391814 HIP1O00291 1037 aa19.05■□□□□ 0.64
SHANK1-204ENST00000391814 RIC3Q7Z5B4 369 aa19.05■□□□□ 0.64
SHANK1-204ENST00000391814 KIAA1328Q86T90 577 aa19.05■□□□□ 0.64
SHANK1-204ENST00000391814 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
SHANK1-204ENST00000391814 CLASRPQ8N2M8 674 aaKnown RBP19.05■□□□□ 0.64
SHANK1-204ENST00000391814 SMTNL1A8MU46 457 aa19.04■□□□□ 0.64
SHANK1-204ENST00000391814 WDR97A6NE52 1622 aa19.04■□□□□ 0.64
SHANK1-204ENST00000391814 ANKRD1Q15327 319 aa19.04■□□□□ 0.64
SHANK1-204ENST00000391814 RSPH4AQ5TD94 716 aa19.04■□□□□ 0.64
SHANK1-204ENST00000391814 CDK5RAP3Q96JB5 506 aa19.04■□□□□ 0.64
SHANK1-204ENST00000391814 EPB41L2O43491 1005 aaKnown RBP19.03■□□□□ 0.64
SHANK1-204ENST00000391814 TANGO6Q9C0B7 1094 aa19.03■□□□□ 0.64
SHANK1-204ENST00000391814 RBM27Q9P2N5 1060 aaKnown RBP19.03■□□□□ 0.64
SHANK1-204ENST00000391814 TXLNAP40222 546 aa19.03■□□□□ 0.64
SHANK1-204ENST00000391814 LMAN1P49257 510 aa19.03■□□□□ 0.64
SHANK1-204ENST00000391814 TBC1D2Q9BYX2 928 aa19.03■□□□□ 0.64
SHANK1-204ENST00000391814 GBP3Q9H0R5 595 aa19.03■□□□□ 0.64
SHANK1-204ENST00000391814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.03■□□□□ 0.64
SHANK1-204ENST00000391814 GGNBP2Q9H3C7 697 aa19.03■□□□□ 0.64
SHANK1-204ENST00000391814 KIF2AO00139 706 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-204ENST00000391814 GNAI2P04899 355 aa19.01■□□□□ 0.63
SHANK1-204ENST00000391814 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
SHANK1-204ENST00000391814 ADCY5O95622 1261 aa19.01■□□□□ 0.63
SHANK1-204ENST00000391814 MTHFSP49914 203 aa19.01■□□□□ 0.63
SHANK1-204ENST00000391814 CFAP100Q494V2 611 aa19.01■□□□□ 0.63
SHANK1-204ENST00000391814 JMYQ8N9B5 988 aa19.01■□□□□ 0.63
SHANK1-204ENST00000391814 SYCP1Q15431 976 aa19.01■□□□□ 0.63
SHANK1-204ENST00000391814 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
SHANK1-204ENST00000391814 MAP2K1Q02750 393 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-204ENST00000391814 ARHGAP29Q52LW3 1261 aa19.01■□□□□ 0.63
SHANK1-204ENST00000391814 PNISRQ8TF01 805 aaKnown RBP19.01■□□□□ 0.63
SHANK1-204ENST00000391814 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
SHANK1-204ENST00000391814 EVA1CP58658 441 aa19■□□□□ 0.63
SHANK1-204ENST00000391814 PAF1Q8N7H5 531 aa19■□□□□ 0.63
SHANK1-204ENST00000391814 TWISTNBQ3B726 338 aaPredicted RBP19■□□□□ 0.63
SHANK1-204ENST00000391814 CFAP45Q9UL16 551 aa19■□□□□ 0.63
SHANK1-204ENST00000391814 CLCN1P35523 988 aa19■□□□□ 0.63
SHANK1-204ENST00000391814 JAKMIP3Q5VZ66 844 aa18.99■□□□□ 0.63
SHANK1-204ENST00000391814 ZSCAN12O43309 604 aa18.99■□□□□ 0.63
SHANK1-204ENST00000391814 GNAI3P08754 354 aa18.99■□□□□ 0.63
SHANK1-204ENST00000391814 GOLGA6L10A0A0M3HER8 536 aa18.99■□□□□ 0.63
SHANK1-204ENST00000391814 ZNF830Q96NB3 372 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-204ENST00000391814 CEP135Q66GS9 1140 aa18.98■□□□□ 0.63
SHANK1-204ENST00000391814 SFPQP23246 707 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHANK1-204ENST00000391814 SART3Q15020 963 aaKnown RBP18.98■□□□□ 0.63
SHANK1-204ENST00000391814 MAP9Q49MG5 647 aa18.98■□□□□ 0.63
SHANK1-204ENST00000391814 TXLNBQ8N3L3 684 aa18.98■□□□□ 0.63
SHANK1-204ENST00000391814 KIF21BO75037 1637 aa18.98■□□□□ 0.63
SHANK1-204ENST00000391814 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
SHANK1-204ENST00000391814 MICALCLQ6ZW33 695 aa18.98■□□□□ 0.63
SHANK1-204ENST00000391814 RAI14Q9P0K7 980 aa18.98■□□□□ 0.63
SHANK1-204ENST00000391814 EID1Q9Y6B2 187 aa18.98■□□□□ 0.63
SHANK1-204ENST00000391814 CWC27Q6UX04 472 aaKnown RBP18.97■□□□□ 0.63
SHANK1-204ENST00000391814 LUC7LQ9NQ29 371 aaKnown RBP18.97■□□□□ 0.63
SHANK1-204ENST00000391814 CUX1P39880 1505 aa18.97■□□□□ 0.63
SHANK1-204ENST00000391814 CASTP20810 708 aaKnown RBP18.97■□□□□ 0.63
SHANK1-204ENST00000391814 CCAR1Q8IX12 1150 aaKnown RBP18.97■□□□□ 0.63
SHANK1-204ENST00000391814 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
SHANK1-204ENST00000391814 FGD6Q6ZV73 1430 aa18.97■□□□□ 0.63
SHANK1-204ENST00000391814 ZSCAN23Q3MJ62 389 aa18.97■□□□□ 0.63
SHANK1-204ENST00000391814 C20orf194Q5TEA3 1177 aa18.97■□□□□ 0.63
SHANK1-204ENST00000391814 SLC26A8Q96RN1 970 aa18.97■□□□□ 0.63
SHANK1-204ENST00000391814 BCCIPQ9P287 314 aaKnown RBP eCLIP18.97■□□□□ 0.63
SHANK1-204ENST00000391814 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
SHANK1-204ENST00000391814 KIF5CO60282 957 aa18.97■□□□□ 0.63
SHANK1-204ENST00000391814 STIM1Q13586 685 aa18.97■□□□□ 0.63
SHANK1-204ENST00000391814 MCM5P33992 734 aa18.96■□□□□ 0.63
SHANK1-204ENST00000391814 FAM107BQ9H098 131 aa18.96■□□□□ 0.63
SHANK1-204ENST00000391814 CCDC30Q5VVM6 783 aa18.96■□□□□ 0.63
SHANK1-204ENST00000391814 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
SHANK1-204ENST00000391814 SYTL4Q96C24 671 aaPredicted RBP18.96■□□□□ 0.63
SHANK1-204ENST00000391814 PRIMPOLQ96LW4 560 aa18.96■□□□□ 0.63
SHANK1-204ENST00000391814 ZSCAN31Q96LW9 406 aaPredicted RBP18.96■□□□□ 0.63
SHANK1-204ENST00000391814 GBP2P32456 591 aaPredicted RBP18.96■□□□□ 0.63
SHANK1-204ENST00000391814 CCDC113Q9H0I3 377 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms