RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PNMA3Q9UL41 463 aa9.11□□□□□ -0.95
TRAV35-201ENST00000390462 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRAV35-201ENST00000390462 FBXO45P0C2W1 286 aa9.1□□□□□ -0.95
TRAV35-201ENST00000390462 DPYDQ12882 1025 aa9.1□□□□□ -0.95
TRAV35-201ENST00000390462 TAS1R3Q7RTX0 852 aa9.1□□□□□ -0.95
TRAV35-201ENST00000390462 SLC43A3Q8NBI5 491 aa9.1□□□□□ -0.95
TRAV35-201ENST00000390462 DHX38Q92620 1227 aaKnown RBP9.1□□□□□ -0.95
TRAV35-201ENST00000390462 TATDN2Q93075 761 aa9.1□□□□□ -0.95
TRAV35-201ENST00000390462 HLA-CQ95604 372 aa9.1□□□□□ -0.95
TRAV35-201ENST00000390462 PRKAG2Q9UGJ0 569 aa9.1□□□□□ -0.95
TRAV35-201ENST00000390462 SNPHO15079 494 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 RAB11FIP3O75154 756 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 ATP2B1P20020 1258 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 NCOA4Q13772 614 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 CCDC144BQ3MJ40 725 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 LDLRAD1Q5T700 205 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 RNF135Q8IUD6 432 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 UBE2Q2Q8WVN8 375 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 TINF2Q9BSI4 451 aa9.09□□□□□ -0.95
TRAV35-201ENST00000390462 ZBBXA8MT70 800 aa9.08□□□□□ -0.96
TRAV35-201ENST00000390462 C6orf229H3BNL8 230 aa9.08□□□□□ -0.96
TRAV35-201ENST00000390462 C21orf2O43822 256 aa9.08□□□□□ -0.96
TRAV35-201ENST00000390462 SDE2Q6IQ49 451 aa9.08□□□□□ -0.96
TRAV35-201ENST00000390462 ECM1Q16610 540 aa9.07□□□□□ -0.96
TRAV35-201ENST00000390462 EGFLAMQ63HQ2 1017 aa9.07□□□□□ -0.96
TRAV35-201ENST00000390462 METTL16Q86W50 562 aaKnown RBP9.07□□□□□ -0.96
TRAV35-201ENST00000390462 RGL4Q8IZJ4 473 aa9.07□□□□□ -0.96
TRAV35-201ENST00000390462 LARGE2Q8N3Y3 721 aa9.07□□□□□ -0.96
TRAV35-201ENST00000390462 ARMC5Q96C12 935 aa9.07□□□□□ -0.96
TRAV35-201ENST00000390462 NLRP2Q9NX02 1062 aa9.07□□□□□ -0.96
TRAV35-201ENST00000390462 PER1O15534 1290 aaPredicted RBP9.06□□□□□ -0.96
TRAV35-201ENST00000390462 PRMT3O60678 531 aa9.06□□□□□ -0.96
TRAV35-201ENST00000390462 GTF2F1P35269 517 aaKnown RBP eCLIP9.06□□□□□ -0.96
TRAV35-201ENST00000390462 OGFOD1Q8N543 542 aa9.06□□□□□ -0.96
TRAV35-201ENST00000390462 CXXC1Q9P0U4 656 aaPredicted RBP9.06□□□□□ -0.96
TRAV35-201ENST00000390462 PLEKHD1A6NEE1 506 aa9.05□□□□□ -0.96
TRAV35-201ENST00000390462 SMAPO00193 183 aa9.05□□□□□ -0.96
TRAV35-201ENST00000390462 PROX2Q3B8N5 592 aa9.05□□□□□ -0.96
TRAV35-201ENST00000390462 TMEM87AQ8NBN3 555 aa9.05□□□□□ -0.96
TRAV35-201ENST00000390462 KCNK17Q96T54 332 aa9.05□□□□□ -0.96
TRAV35-201ENST00000390462 TGIF2Q9GZN2 237 aa9.05□□□□□ -0.96
TRAV35-201ENST00000390462 PPME1Q9Y570 386 aa9.05□□□□□ -0.96
TRAV35-201ENST00000390462 ARHGAP4P98171 946 aa9.04□□□□□ -0.96
TRAV35-201ENST00000390462 OCLNQ16625 522 aa9.04□□□□□ -0.96
TRAV35-201ENST00000390462 GPATCH3Q96I76 525 aa9.04□□□□□ -0.96
TRAV35-201ENST00000390462 CAPN10Q9HC96 672 aa9.04□□□□□ -0.96
TRAV35-201ENST00000390462 METTL14Q9HCE5 456 aaKnown RBP9.04□□□□□ -0.96
TRAV35-201ENST00000390462 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
TRAV35-201ENST00000390462 RIPOR2Q9Y4F9 1068 aa9.04□□□□□ -0.96
TRAV35-201ENST00000390462 LOC102724159A0A0B4J2E5 919 aa9.03□□□□□ -0.96
TRAV35-201ENST00000390462 IGBP1P78318 339 aa9.03□□□□□ -0.96
TRAV35-201ENST00000390462 PWP2Q15269 919 aaKnown RBP9.03□□□□□ -0.96
TRAV35-201ENST00000390462 SLFNL1Q499Z3 407 aa9.03□□□□□ -0.96
TRAV35-201ENST00000390462 GTF3C2Q8WUA4 911 aaPredicted RBP9.03□□□□□ -0.96
TRAV35-201ENST00000390462 ZNF594Q96JF6 807 aaPredicted RBP9.03□□□□□ -0.96
TRAV35-201ENST00000390462 SPACA7Q96KW9 195 aa9.03□□□□□ -0.96
TRAV35-201ENST00000390462 PRIMPOLQ96LW4 560 aa9.03□□□□□ -0.96
TRAV35-201ENST00000390462 CCSER2Q9H7U1 834 aa9.03□□□□□ -0.96
TRAV35-201ENST00000390462 TBX22Q9Y458 520 aa9.03□□□□□ -0.96
TRAV35-201ENST00000390462 P4HBP07237 508 aaKnown RBP9.02□□□□□ -0.97
TRAV35-201ENST00000390462 FKBP4Q02790 459 aaKnown RBP eCLIP9.02□□□□□ -0.97
TRAV35-201ENST00000390462 SF3B2Q13435 895 aaKnown RBP9.02□□□□□ -0.97
TRAV35-201ENST00000390462 PLPP7Q8NBV4 271 aa9.02□□□□□ -0.97
TRAV35-201ENST00000390462 KCNH8Q96L42 1107 aa9.02□□□□□ -0.97
TRAV35-201ENST00000390462 DNAAF2Q9NVR5 837 aaKnown RBP9.02□□□□□ -0.97
TRAV35-201ENST00000390462 CLDN10P78369 228 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 KCNH2Q12809 1159 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 PTPROQ16827 1216 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 TRIM50Q86XT4 487 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 RNF34Q969K3 372 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 ZBED2Q9BTP6 218 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 PIF1Q9H611 641 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 METTL5Q9NRN9 209 aaKnown RBP9.01□□□□□ -0.97
TRAV35-201ENST00000390462 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 SUGT1Q9Y2Z0 365 aa9.01□□□□□ -0.97
TRAV35-201ENST00000390462 DNMT3AQ9Y6K1 912 aaPredicted RBP9.01□□□□□ -0.97
TRAV35-201ENST00000390462 NACADO15069 1562 aa9□□□□□ -0.97
TRAV35-201ENST00000390462 hCG_2014768A0A024R1R8 64 aa9□□□□□ -0.97
TRAV35-201ENST00000390462 FMNL1O95466 1100 aaPredicted RBP9□□□□□ -0.97
TRAV35-201ENST00000390462 ATP1A2P50993 1020 aa9□□□□□ -0.97
TRAV35-201ENST00000390462 XPCQ01831 940 aaPredicted RBP9□□□□□ -0.97
TRAV35-201ENST00000390462 RBL2Q08999 1139 aa9□□□□□ -0.97
TRAV35-201ENST00000390462 EML3Q32P44 896 aa9□□□□□ -0.97
TRAV35-201ENST00000390462 ZNF526Q8TF50 670 aaPredicted RBP9□□□□□ -0.97
TRAV35-201ENST00000390462 GMLQ99445 158 aa9□□□□□ -0.97
TRAV35-201ENST00000390462 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
TRAV35-201ENST00000390462 GNL2Q13823 731 aaKnown RBP8.99□□□□□ -0.97
TRAV35-201ENST00000390462 PHTF2Q8N3S3 785 aa8.99□□□□□ -0.97
TRAV35-201ENST00000390462 PMFBP1Q8TBY8 1022 aa8.99□□□□□ -0.97
TRAV35-201ENST00000390462 KCNB2Q92953 911 aa8.99□□□□□ -0.97
TRAV35-201ENST00000390462 ZSWIM4Q9H7M6 989 aa8.99□□□□□ -0.97
TRAV35-201ENST00000390462 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.99□□□□□ -0.97
TRAV35-201ENST00000390462 DKK1O94907 266 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 ITGAEP38570 1179 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 FANCCQ00597 558 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 GRIPAP1Q4V328 841 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 CCDC181Q5TID7 509 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 NLGN1Q8N2Q7 840 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms