RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 DDB1Q16531 1140 aa17.29■□□□□ 0.36
SOD1-202ENST00000389995 PTGER2P43116 358 aa17.28■□□□□ 0.36
SOD1-202ENST00000389995 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
SOD1-202ENST00000389995 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.36
SOD1-202ENST00000389995 PIK3C2AO00443 1686 aa17.27■□□□□ 0.36
SOD1-202ENST00000389995 SRPK2P78362 688 aaKnown RBP17.27■□□□□ 0.36
SOD1-202ENST00000389995 TOM1L2Q6ZVM7 507 aa17.27■□□□□ 0.36
SOD1-202ENST00000389995 MARCH10Q8NA82 808 aaPredicted RBP17.27■□□□□ 0.36
SOD1-202ENST00000389995 QRICH2Q9H0J4 1663 aa17.26■□□□□ 0.35
SOD1-202ENST00000389995 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
SOD1-202ENST00000389995 NLRP6P59044 892 aa17.25■□□□□ 0.35
SOD1-202ENST00000389995 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
SOD1-202ENST00000389995 FHDC1Q9C0D6 1143 aaPredicted RBP17.25■□□□□ 0.35
SOD1-202ENST00000389995 SLIT3O75094 1523 aa17.25■□□□□ 0.35
SOD1-202ENST00000389995 C11orf95C9JLR9 678 aaPredicted RBP17.24■□□□□ 0.35
SOD1-202ENST00000389995 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
SOD1-202ENST00000389995 CEP350Q5VT06 3117 aa17.23■□□□□ 0.35
SOD1-202ENST00000389995 TXNRD1Q16881 649 aa17.23■□□□□ 0.35
SOD1-202ENST00000389995 SYT17Q9BSW7 474 aa17.23■□□□□ 0.35
SOD1-202ENST00000389995 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
SOD1-202ENST00000389995 SOX12O15370 315 aa17.22■□□□□ 0.35
SOD1-202ENST00000389995 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
SOD1-202ENST00000389995 STK32BQ9NY57 414 aa17.22■□□□□ 0.35
SOD1-202ENST00000389995 USP6P35125 1406 aa17.21■□□□□ 0.35
SOD1-202ENST00000389995 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
SOD1-202ENST00000389995 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.34
SOD1-202ENST00000389995 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
SOD1-202ENST00000389995 BTAF1O14981 1849 aa17.19■□□□□ 0.34
SOD1-202ENST00000389995 NHSQ6T4R5 1651 aa17.19■□□□□ 0.34
SOD1-202ENST00000389995 SGIP1Q9BQI5 828 aa17.18■□□□□ 0.34
SOD1-202ENST00000389995 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
SOD1-202ENST00000389995 CENPJQ9HC77 1338 aaPredicted RBP17.18■□□□□ 0.34
SOD1-202ENST00000389995 CSB-PGBD3P0DP91 1061 aa17.17■□□□□ 0.34
SOD1-202ENST00000389995 BCL9O00512 1426 aa17.16■□□□□ 0.34
SOD1-202ENST00000389995 C1QTNF8P60827 252 aa17.16■□□□□ 0.34
SOD1-202ENST00000389995 ACSBG1Q96GR2 724 aa17.16■□□□□ 0.34
SOD1-202ENST00000389995 MTFR1LQ9H019 292 aa17.16■□□□□ 0.34
SOD1-202ENST00000389995 PAPPAQ13219 1627 aa17.15■□□□□ 0.34
SOD1-202ENST00000389995 EXOC5O00471 708 aa17.15■□□□□ 0.34
SOD1-202ENST00000389995 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
SOD1-202ENST00000389995 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
SOD1-202ENST00000389995 ARXQ96QS3 562 aa17.14■□□□□ 0.33
SOD1-202ENST00000389995 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
SOD1-202ENST00000389995 CARD10Q9BWT7 1032 aa17.14■□□□□ 0.33
SOD1-202ENST00000389995 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.33
SOD1-202ENST00000389995 LTN1O94822 1766 aa17.13■□□□□ 0.33
SOD1-202ENST00000389995 TRPM1Q7Z4N2 1603 aa17.13■□□□□ 0.33
SOD1-202ENST00000389995 NFAT5O94916 1531 aa17.11■□□□□ 0.33
SOD1-202ENST00000389995 ZNF827Q17R98 1081 aa17.11■□□□□ 0.33
SOD1-202ENST00000389995 TNS2Q63HR2 1409 aa17.11■□□□□ 0.33
SOD1-202ENST00000389995 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
SOD1-202ENST00000389995 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
SOD1-202ENST00000389995 GPR162Q16538 588 aa17.09■□□□□ 0.33
SOD1-202ENST00000389995 ABCC6O95255 1503 aa17.08■□□□□ 0.32
SOD1-202ENST00000389995 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
SOD1-202ENST00000389995 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
SOD1-202ENST00000389995 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
SOD1-202ENST00000389995 MON2Q7Z3U7 1717 aa17.07■□□□□ 0.32
SOD1-202ENST00000389995 LRRC4BQ9NT99 713 aa17.07■□□□□ 0.32
SOD1-202ENST00000389995 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
SOD1-202ENST00000389995 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
SOD1-202ENST00000389995 SHANK3Q9BYB0 1731 aa17.06■□□□□ 0.32
SOD1-202ENST00000389995 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
SOD1-202ENST00000389995 NLRP2Q9NX02 1062 aa17.05■□□□□ 0.32
SOD1-202ENST00000389995 MAP3K5Q99683 1374 aa17.04■□□□□ 0.32
SOD1-202ENST00000389995 KCNQ4P56696 695 aa17.04■□□□□ 0.32
SOD1-202ENST00000389995 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
SOD1-202ENST00000389995 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.32
SOD1-202ENST00000389995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
SOD1-202ENST00000389995 NLGN2Q8NFZ4 835 aa17.02■□□□□ 0.32
SOD1-202ENST00000389995 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
SOD1-202ENST00000389995 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.31
SOD1-202ENST00000389995 TTC21AQ8NDW8 1320 aa17.01■□□□□ 0.31
SOD1-202ENST00000389995 IL2RBP14784 551 aa17.01■□□□□ 0.31
SOD1-202ENST00000389995 IFFO2Q5TF58 517 aa17.01■□□□□ 0.31
SOD1-202ENST00000389995 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
SOD1-202ENST00000389995 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
SOD1-202ENST00000389995 USP54Q70EL1 1684 aa17.01■□□□□ 0.31
SOD1-202ENST00000389995 ERBB3P21860 1342 aa17■□□□□ 0.31
SOD1-202ENST00000389995 PNPLA7Q6ZV29 1317 aa16.99■□□□□ 0.31
SOD1-202ENST00000389995 LY75O60449 1722 aa16.99■□□□□ 0.31
SOD1-202ENST00000389995 NME9Q86XW9 330 aa16.99■□□□□ 0.31
SOD1-202ENST00000389995 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
SOD1-202ENST00000389995 YBX3P16989 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
SOD1-202ENST00000389995 POLD1P28340 1107 aa16.97■□□□□ 0.31
SOD1-202ENST00000389995 DDX54Q8TDD1 881 aaKnown RBP16.97■□□□□ 0.31
SOD1-202ENST00000389995 L3MBTL2Q969R5 705 aa16.97■□□□□ 0.31
SOD1-202ENST00000389995 TFCP2L1Q9NZI6 479 aa16.96■□□□□ 0.31
SOD1-202ENST00000389995 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
SOD1-202ENST00000389995 SLC16A10Q8TF71 515 aa16.94■□□□□ 0.3
SOD1-202ENST00000389995 LTV1Q96GA3 475 aaPredicted RBP16.94■□□□□ 0.3
SOD1-202ENST00000389995 CD163L1Q9NR16 1453 aa16.93■□□□□ 0.3
SOD1-202ENST00000389995 USP31Q70CQ4 1352 aa16.93■□□□□ 0.3
SOD1-202ENST00000389995 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
SOD1-202ENST00000389995 ROCK2O75116 1388 aaKnown RBP16.92■□□□□ 0.3
SOD1-202ENST00000389995 SBNO2Q9Y2G9 1366 aa16.92■□□□□ 0.3
SOD1-202ENST00000389995 FAM208AQ9UK61 1670 aaKnown RBP16.92■□□□□ 0.3
SOD1-202ENST00000389995 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
SOD1-202ENST00000389995 MSH5O43196 834 aa16.91■□□□□ 0.3
SOD1-202ENST00000389995 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms