RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 NEK4P51957 841 aa22.97■■□□□ 1.27
SMARCD1-201ENST00000381513 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
SMARCD1-201ENST00000381513 TERF2Q15554 542 aa22.97■■□□□ 1.27
SMARCD1-201ENST00000381513 INTS3Q68E01 1043 aaKnown RBP22.97■■□□□ 1.27
SMARCD1-201ENST00000381513 CASC1Q6TDU7 716 aa22.97■■□□□ 1.27
SMARCD1-201ENST00000381513 SMARCA5O60264 1052 aaPredicted RBP22.96■■□□□ 1.27
SMARCD1-201ENST00000381513 CTIFO43310 598 aaKnown RBP22.96■■□□□ 1.27
SMARCD1-201ENST00000381513 IRX3P78415 501 aaPredicted RBP22.96■■□□□ 1.27
SMARCD1-201ENST00000381513 CCDC141Q6ZP82 1450 aa22.95■■□□□ 1.27
SMARCD1-201ENST00000381513 NUP160Q12769 1436 aa22.95■■□□□ 1.27
SMARCD1-201ENST00000381513 PDS5BQ9NTI5 1447 aa22.95■■□□□ 1.26
SMARCD1-201ENST00000381513 DDX41Q9UJV9 622 aaKnown RBP22.95■■□□□ 1.26
SMARCD1-201ENST00000381513 CALCOCO1Q9P1Z2 691 aa22.95■■□□□ 1.26
SMARCD1-201ENST00000381513 SYNMO15061 1565 aa22.94■■□□□ 1.26
SMARCD1-201ENST00000381513 KDM4AO75164 1064 aa22.94■■□□□ 1.26
SMARCD1-201ENST00000381513 ZNF592Q92610 1267 aa22.94■■□□□ 1.26
SMARCD1-201ENST00000381513 IFT57Q9NWB7 429 aa22.94■■□□□ 1.26
SMARCD1-201ENST00000381513 USP48Q86UV5 1035 aa22.93■■□□□ 1.26
SMARCD1-201ENST00000381513 KRT222Q8N1A0 295 aa22.93■■□□□ 1.26
SMARCD1-201ENST00000381513 GOLGA6L6A8MZA4 724 aa22.93■■□□□ 1.26
SMARCD1-201ENST00000381513 TMX3Q96JJ7 454 aa22.93■■□□□ 1.26
SMARCD1-201ENST00000381513 EIF2AK4Q9P2K8 1649 aaKnown RBP22.92■■□□□ 1.26
SMARCD1-201ENST00000381513 KCNF1Q9H3M0 494 aa22.92■■□□□ 1.26
SMARCD1-201ENST00000381513 TNNT3P45378 269 aaPredicted RBP22.91■■□□□ 1.26
SMARCD1-201ENST00000381513 CFAP44Q96MT7 982 aa22.91■■□□□ 1.26
SMARCD1-201ENST00000381513 C16orf71Q8IYS4 520 aaPredicted RBP22.91■■□□□ 1.26
SMARCD1-201ENST00000381513 CCDC112Q8NEF3 446 aa22.91■■□□□ 1.26
SMARCD1-201ENST00000381513 ITSN2Q9NZM3 1697 aa22.9■■□□□ 1.26
SMARCD1-201ENST00000381513 BRD1O95696 1058 aa22.9■■□□□ 1.26
SMARCD1-201ENST00000381513 DRC7Q8IY82 874 aa22.9■■□□□ 1.26
SMARCD1-201ENST00000381513 ZBTB9Q96C00 473 aa22.9■■□□□ 1.26
SMARCD1-201ENST00000381513 KANK1Q14678 1352 aa22.9■■□□□ 1.26
SMARCD1-201ENST00000381513 ADCY10Q96PN6 1610 aa22.9■■□□□ 1.26
SMARCD1-201ENST00000381513 CCDC183Q5T5S1 534 aa22.9■■□□□ 1.26
SMARCD1-201ENST00000381513 PLEKHM2Q8IWE5 1019 aa22.89■■□□□ 1.26
SMARCD1-201ENST00000381513 PPIP5K1Q6PFW1 1433 aa22.89■■□□□ 1.26
SMARCD1-201ENST00000381513 LAMC1P11047 1609 aa22.89■■□□□ 1.26
SMARCD1-201ENST00000381513 SCAF11Q99590 1463 aaKnown RBP22.89■■□□□ 1.25
SMARCD1-201ENST00000381513 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.89■■□□□ 1.25
SMARCD1-201ENST00000381513 V9GYY5 206 aaPredicted RBP22.89■■□□□ 1.25
SMARCD1-201ENST00000381513 TNNT1P13805 278 aa22.88■■□□□ 1.25
SMARCD1-201ENST00000381513 KIF18AQ8NI77 898 aa22.88■■□□□ 1.25
SMARCD1-201ENST00000381513 REC8O95072 547 aa22.88■■□□□ 1.25
SMARCD1-201ENST00000381513 CAPN2P17655 700 aa22.88■■□□□ 1.25
SMARCD1-201ENST00000381513 PTGS1P23219 599 aa22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 ZBTB7BO15156 539 aaPredicted RBP22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 TPM3P06753 285 aa22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 TTC22Q5TAA0 569 aa22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 GIMAP6Q6P9H5 292 aa22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 ZFP91Q96JP5 570 aaPredicted RBP22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 SLC12A5Q9H2X9 1139 aa22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 MORC2Q9Y6X9 1032 aaPredicted RBP22.87■■□□□ 1.25
SMARCD1-201ENST00000381513 RSPH4AQ5TD94 716 aa22.86■■□□□ 1.25
SMARCD1-201ENST00000381513 CROCC2H7BZ55 1655 aa22.86■■□□□ 1.25
SMARCD1-201ENST00000381513 ELL2O00472 640 aaPredicted RBP22.86■■□□□ 1.25
SMARCD1-201ENST00000381513 TMPOP42166 694 aaKnown RBP22.86■■□□□ 1.25
SMARCD1-201ENST00000381513 NSD3Q9BZ95 1437 aa22.85■■□□□ 1.25
SMARCD1-201ENST00000381513 SIRT2Q8IXJ6 389 aa22.85■■□□□ 1.25
SMARCD1-201ENST00000381513 ANKRD36BQ8N2N9 1353 aa22.85■■□□□ 1.25
SMARCD1-201ENST00000381513 SMTNL1A8MU46 457 aa22.85■■□□□ 1.25
SMARCD1-201ENST00000381513 NPHP1O15259 732 aa22.85■■□□□ 1.25
SMARCD1-201ENST00000381513 OTUD7AQ8TE49 926 aaPredicted RBP22.84■■□□□ 1.25
SMARCD1-201ENST00000381513 ST7Q9NRC1 585 aa22.84■■□□□ 1.25
SMARCD1-201ENST00000381513 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
SMARCD1-201ENST00000381513 SDSP20132 328 aa22.84■■□□□ 1.25
SMARCD1-201ENST00000381513 MX1P20591 662 aa22.84■■□□□ 1.25
SMARCD1-201ENST00000381513 RTF1Q92541 710 aaKnown RBP22.83■■□□□ 1.25
SMARCD1-201ENST00000381513 IQSEC2Q5JU85 1478 aa22.83■■□□□ 1.25
SMARCD1-201ENST00000381513 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.25
SMARCD1-201ENST00000381513 CFAP70Q5T0N1 1121 aa22.83■■□□□ 1.24
SMARCD1-201ENST00000381513 TPD52L1Q16890 204 aaPredicted RBP22.82■■□□□ 1.24
SMARCD1-201ENST00000381513 FIBPO43427 364 aa22.82■■□□□ 1.24
SMARCD1-201ENST00000381513 SLC20A2Q08357 652 aa22.82■■□□□ 1.24
SMARCD1-201ENST00000381513 AP5Z1O43299 807 aa22.82■■□□□ 1.24
SMARCD1-201ENST00000381513 LRMPQ12912 555 aa22.82■■□□□ 1.24
SMARCD1-201ENST00000381513 CNPY2Q9Y2B0 182 aa22.81■■□□□ 1.24
SMARCD1-201ENST00000381513 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
SMARCD1-201ENST00000381513 CCDC186Q7Z3E2 898 aa22.81■■□□□ 1.24
SMARCD1-201ENST00000381513 ABCC11Q96J66 1382 aa22.8■■□□□ 1.24
SMARCD1-201ENST00000381513 TRIM35Q9UPQ4 493 aa22.8■■□□□ 1.24
SMARCD1-201ENST00000381513 SHROOM2Q13796 1616 aa22.8■■□□□ 1.24
SMARCD1-201ENST00000381513 RAPGEF6Q8TEU7 1601 aa22.8■■□□□ 1.24
SMARCD1-201ENST00000381513 PLB1Q6P1J6 1458 aa22.8■■□□□ 1.24
SMARCD1-201ENST00000381513 ERC2O15083 957 aa22.79■■□□□ 1.24
SMARCD1-201ENST00000381513 SRPK2P78362 688 aaKnown RBP22.78■■□□□ 1.24
SMARCD1-201ENST00000381513 ZNF397Q8NF99 534 aaPredicted RBP22.78■■□□□ 1.24
SMARCD1-201ENST00000381513 NOS1P29475 1434 aa22.78■■□□□ 1.24
SMARCD1-201ENST00000381513 SPAG9O60271 1321 aaKnown RBP22.78■■□□□ 1.24
SMARCD1-201ENST00000381513 WDR33Q9C0J8 1336 aaKnown RBP22.78■■□□□ 1.24
SMARCD1-201ENST00000381513 SYCP1Q15431 976 aa22.78■■□□□ 1.24
SMARCD1-201ENST00000381513 KMT5BQ4FZB7 885 aa22.78■■□□□ 1.24
SMARCD1-201ENST00000381513 HNRNPH2P55795 449 aaKnown RBP22.77■■□□□ 1.24
SMARCD1-201ENST00000381513 UPF3BQ9BZI7 483 aaKnown RBP22.77■■□□□ 1.24
SMARCD1-201ENST00000381513 TSPYL1Q9H0U9 437 aa22.77■■□□□ 1.24
SMARCD1-201ENST00000381513 NOL10Q9BSC4 688 aaKnown RBP22.77■■□□□ 1.24
SMARCD1-201ENST00000381513 CHMP3Q9Y3E7 222 aa22.77■■□□□ 1.24
SMARCD1-201ENST00000381513 PAXBP1Q9Y5B6 917 aa22.76■■□□□ 1.23
SMARCD1-201ENST00000381513 MCM2P49736 904 aa22.76■■□□□ 1.23
SMARCD1-201ENST00000381513 ALDH1L2Q3SY69 923 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms