RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 MYO1BO43795 1136 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 TSPY4P0CV99 314 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 TSPY10P0CW01 314 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 RLBP1P12271 317 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 EFCAB13Q8IY85 973 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 SLC8A1P32418 973 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 FYCO1Q9BQS8 1478 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 B4GALNT4Q76KP1 1039 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 RCAN3Q9UKA8 241 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 LIMCH1Q9UPQ0 1083 aa4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 R3HCC1Q9Y3T6 440 aaKnown RBP4.07□□□□□ -1.76
PKHD1L1-201ENST00000378402 PIP4K2AP48426 406 aaPredicted RBP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 EIF5P55010 431 aaKnown RBP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC102AQ96A19 550 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 LUC7LQ9NQ29 371 aaKnown RBP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 UQCRHLA0A096LP55 91 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 TRAK2O60296 914 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 UQCRHP07919 91 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 MSL3Q8N5Y2 521 aaKnown RBP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 BANK1Q8NDB2 785 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 PPP1R14BQ96C90 147 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 DDX49Q9Y6V7 483 aaKnown RBP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 CECR2Q9BXF3 1484 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 NLRP13Q86W25 1043 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 HOOK1Q9UJC3 728 aaKnown RBP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 MAP2K2P36507 400 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 TMCO3Q6UWJ1 677 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 CROCCP2Q86T23 111 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 FRAT1Q92837 279 aaPredicted RBP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 BHMT2Q9H2M3 363 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 MAP3K5Q99683 1374 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 TRIM52Q96A61 297 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 SESN3P58005 492 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 SEPT6Q14141 434 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 SAFB2Q14151 953 aaKnown RBP eCLIP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 OTUD6BQ8N6M0 293 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC170Q8IYT3 715 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 MYRIPQ8NFW9 859 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC30Q5VVM6 783 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 CASQ1P31415 396 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 ITGAEP38570 1179 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 KIF18AQ8NI77 898 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 STAG1Q8WVM7 1258 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 FMNL2Q96PY5 1086 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 PDE3AQ14432 1141 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 CT47A1Q5JQC4 288 aaPredicted RBP4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 CEP112Q8N8E3 955 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 IFT57Q9NWB7 429 aa4.06□□□□□ -1.76
PKHD1L1-201ENST00000378402 VIMP08670 466 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCAR2Q8N163 923 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 NACADO15069 1562 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 SPAG9O60271 1321 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 TSC1Q92574 1164 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 IQCGQ9H095 443 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 BHMTQ93088 406 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 NEDD9Q14511 834 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 IQSEC3Q9UPP2 1182 aaPredicted RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 DAAM1Q9Y4D1 1078 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 GOPCQ9HD26 462 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 ZSCAN12O43309 604 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 KIF5CO60282 957 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 TUBA4AP68366 448 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 SMC1AQ14683 1233 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 SEPT7Q16181 437 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 DDX12PQ92771 950 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 CEP135Q66GS9 1140 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 RPGRIP1Q96KN7 1286 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 HOMER3Q9NSC5 361 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 PPP6R1Q9UPN7 881 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 SATB2Q9UPW6 733 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 CHRM1P11229 460 aaPredicted RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 DDX10Q13206 875 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 HNRNPUL2Q1KMD3 747 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 C10orf67Q8IYJ2 551 aa4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 LSM14AQ8ND56 463 aaKnown RBP4.05□□□□□ -1.76
PKHD1L1-201ENST00000378402 RAB15P59190 212 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CXorf38Q8TB03 319 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCHCR1Q8TD31 782 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 WHAMMQ8TF30 809 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 PLEKHD1A6NEE1 506 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 TTC31Q49AM3 519 aaPredicted RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC85AQ96PX6 553 aaPredicted RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 RUFY1Q96T51 708 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 PRPHP41219 470 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 SFSWAPQ12872 951 aaKnown RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 TRAF1Q13077 416 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC83Q8IWF9 413 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC40Q4G0X9 1142 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 GBP6Q6ZN66 633 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 ZNF397Q8NF99 534 aaPredicted RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 ZNHIT6Q9NWK9 470 aaKnown RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CEP85LQ5SZL2 805 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 KCTD17Q8N5Z5 321 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 TBC1D22AQ8WUA7 517 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC88BA6NC98 1476 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 UNC13AQ9UPW8 1703 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 IKQ13123 557 aaPredicted RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC57Q2TAC2 916 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms