RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SLKQ9H2G2 1235 aaPredicted RBP19.37■□□□□ 0.69
FXN-201ENST00000377270 CABP1Q9NZU7 370 aa19.37■□□□□ 0.69
FXN-201ENST00000377270 R3HCC1Q9Y3T6 440 aaKnown RBP19.37■□□□□ 0.69
FXN-201ENST00000377270 WAPLQ7Z5K2 1190 aa19.36■□□□□ 0.69
FXN-201ENST00000377270 RIMS2Q9UQ26 1411 aa19.35■□□□□ 0.69
FXN-201ENST00000377270 U2SURPO15042 1029 aaKnown RBP19.35■□□□□ 0.69
FXN-201ENST00000377270 CCDC27Q2M243 656 aa19.35■□□□□ 0.69
FXN-201ENST00000377270 CGNQ9P2M7 1197 aaKnown RBP19.35■□□□□ 0.69
FXN-201ENST00000377270 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
FXN-201ENST00000377270 UQCRHLA0A096LP55 91 aa19.35■□□□□ 0.69
FXN-201ENST00000377270 UQCRHP07919 91 aa19.35■□□□□ 0.69
FXN-201ENST00000377270 ANTXR1Q9H6X2 564 aa19.35■□□□□ 0.69
FXN-201ENST00000377270 GRPEL1Q9HAV7 217 aa19.35■□□□□ 0.69
FXN-201ENST00000377270 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
FXN-201ENST00000377270 SPATA31D1Q6ZQQ2 1576 aa19.34■□□□□ 0.69
FXN-201ENST00000377270 PDE3AQ14432 1141 aa19.33■□□□□ 0.69
FXN-201ENST00000377270 C14orf37Q86TY3 774 aa19.33■□□□□ 0.69
FXN-201ENST00000377270 ARHGEF40Q8TER5 1519 aa19.33■□□□□ 0.68
FXN-201ENST00000377270 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
FXN-201ENST00000377270 RARSP54136 660 aaKnown RBP19.32■□□□□ 0.68
FXN-201ENST00000377270 PANK1Q8TE04 598 aa19.31■□□□□ 0.68
FXN-201ENST00000377270 AEBP1Q8IUX7 1158 aa19.3■□□□□ 0.68
FXN-201ENST00000377270 HDAC5Q9UQL6 1122 aa19.3■□□□□ 0.68
FXN-201ENST00000377270 IRX5P78411 483 aaPredicted RBP19.29■□□□□ 0.68
FXN-201ENST00000377270 COG6Q9Y2V7 657 aa19.29■□□□□ 0.68
FXN-201ENST00000377270 NLRP1Q9C000 1473 aa19.29■□□□□ 0.68
FXN-201ENST00000377270 DYNC1I1O14576 645 aa19.29■□□□□ 0.68
FXN-201ENST00000377270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.29■□□□□ 0.68
FXN-201ENST00000377270 ZMYM3Q14202 1370 aa19.29■□□□□ 0.68
FXN-201ENST00000377270 MED14O60244 1454 aa19.28■□□□□ 0.68
FXN-201ENST00000377270 HSP90B1P14625 803 aaKnown RBP19.28■□□□□ 0.68
FXN-201ENST00000377270 PLEKHF1Q96S99 279 aa19.28■□□□□ 0.68
FXN-201ENST00000377270 MMP14P50281 582 aa19.27■□□□□ 0.68
FXN-201ENST00000377270 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.27■□□□□ 0.68
FXN-201ENST00000377270 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
FXN-201ENST00000377270 BCL2L13Q9BXK5 485 aa19.27■□□□□ 0.68
FXN-201ENST00000377270 DLC1Q96QB1 1528 aa19.26■□□□□ 0.67
FXN-201ENST00000377270 CBX1P83916 185 aa19.26■□□□□ 0.67
FXN-201ENST00000377270 MAPK8IP3Q9UPT6 1336 aa19.26■□□□□ 0.67
FXN-201ENST00000377270 COL3A1P02461 1466 aaPredicted RBP19.26■□□□□ 0.67
FXN-201ENST00000377270 DIAPH1O60610 1272 aaKnown RBP19.26■□□□□ 0.67
FXN-201ENST00000377270 SEC24BO95487 1268 aa19.26■□□□□ 0.67
FXN-201ENST00000377270 TMPOP42166 694 aaKnown RBP19.26■□□□□ 0.67
FXN-201ENST00000377270 ANKRD26Q9UPS8 1709 aa19.25■□□□□ 0.67
FXN-201ENST00000377270 IGHDP01880 384 aa19.25■□□□□ 0.67
FXN-201ENST00000377270 MCM4P33991 863 aa19.25■□□□□ 0.67
FXN-201ENST00000377270 ZSCAN30Q86W11 494 aa19.25■□□□□ 0.67
FXN-201ENST00000377270 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
FXN-201ENST00000377270 TXNDC2Q86VQ3 553 aa19.24■□□□□ 0.67
FXN-201ENST00000377270 METP08581 1390 aa19.24■□□□□ 0.67
FXN-201ENST00000377270 ADGRB2O60241 1585 aa19.24■□□□□ 0.67
FXN-201ENST00000377270 FBLN1P23142 703 aa19.23■□□□□ 0.67
FXN-201ENST00000377270 WASLO00401 505 aaPredicted RBP19.23■□□□□ 0.67
FXN-201ENST00000377270 TSR2Q969E8 191 aaKnown RBP19.23■□□□□ 0.67
FXN-201ENST00000377270 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
FXN-201ENST00000377270 CLGNO14967 610 aa19.22■□□□□ 0.67
FXN-201ENST00000377270 TRIM35Q9UPQ4 493 aa19.22■□□□□ 0.67
FXN-201ENST00000377270 TNNQ9UQP3 1299 aa19.22■□□□□ 0.67
FXN-201ENST00000377270 KIF13AQ9H1H9 1805 aa19.22■□□□□ 0.67
FXN-201ENST00000377270 HDGFP51858 240 aaKnown RBP19.22■□□□□ 0.67
FXN-201ENST00000377270 MSNP26038 577 aaKnown RBP19.21■□□□□ 0.67
FXN-201ENST00000377270 PSEN1P49768 467 aa19.21■□□□□ 0.67
FXN-201ENST00000377270 PNPLA6Q8IY17 1366 aa19.21■□□□□ 0.67
FXN-201ENST00000377270 APPP05067 770 aa19.21■□□□□ 0.67
FXN-201ENST00000377270 RLBP1P12271 317 aa19.21■□□□□ 0.66
FXN-201ENST00000377270 SLC20A2Q08357 652 aa19.21■□□□□ 0.66
FXN-201ENST00000377270 CHMP4CQ96CF2 233 aa19.21■□□□□ 0.66
FXN-201ENST00000377270 DNAJC2Q99543 621 aaKnown RBP19.21■□□□□ 0.66
FXN-201ENST00000377270 ATP7BP35670 1465 aa19.2■□□□□ 0.66
FXN-201ENST00000377270 POLKQ9UBT6 870 aa19.2■□□□□ 0.66
FXN-201ENST00000377270 KIF20BQ96Q89 1820 aa19.2■□□□□ 0.66
FXN-201ENST00000377270 TRAK2O60296 914 aa19.2■□□□□ 0.66
FXN-201ENST00000377270 TBC1D2Q9BYX2 928 aa19.2■□□□□ 0.66
FXN-201ENST00000377270 NRXN3Q9Y4C0 1643 aa19.19■□□□□ 0.66
FXN-201ENST00000377270 FAM193AP78312 1265 aa19.19■□□□□ 0.66
FXN-201ENST00000377270 EXOSC9Q06265 439 aaKnown RBP19.19■□□□□ 0.66
FXN-201ENST00000377270 ISY1Q9ULR0 285 aaKnown RBP19.19■□□□□ 0.66
FXN-201ENST00000377270 TNRQ92752 1358 aa19.18■□□□□ 0.66
FXN-201ENST00000377270 SOX12O15370 315 aa19.18■□□□□ 0.66
FXN-201ENST00000377270 PPIP5K1Q6PFW1 1433 aa19.18■□□□□ 0.66
FXN-201ENST00000377270 NUDT16Q96DE0 195 aaKnown RBP19.18■□□□□ 0.66
FXN-201ENST00000377270 ZBTB9Q96C00 473 aa19.17■□□□□ 0.66
FXN-201ENST00000377270 UPF2Q9HAU5 1272 aaKnown RBP19.17■□□□□ 0.66
FXN-201ENST00000377270 NCKAP5LQ9HCH0 1330 aa19.17■□□□□ 0.66
FXN-201ENST00000377270 FCHSD2O94868 740 aa19.17■□□□□ 0.66
FXN-201ENST00000377270 KCNJ4P48050 445 aa19.17■□□□□ 0.66
FXN-201ENST00000377270 CT47B1P0C2W7 299 aaPredicted RBP19.16■□□□□ 0.66
FXN-201ENST00000377270 NME9Q86XW9 330 aa19.16■□□□□ 0.66
FXN-201ENST00000377270 TBC1D32Q96NH3 1257 aa19.16■□□□□ 0.66
FXN-201ENST00000377270 PATL2C9JE40 543 aaKnown RBP19.15■□□□□ 0.66
FXN-201ENST00000377270 CPSF1Q10570 1443 aaKnown RBP19.15■□□□□ 0.66
FXN-201ENST00000377270 ZKSCAN2Q63HK3 967 aa19.15■□□□□ 0.66
FXN-201ENST00000377270 ZRANB1Q9UGI0 708 aa19.15■□□□□ 0.66
FXN-201ENST00000377270 IL16Q14005 1332 aa19.14■□□□□ 0.66
FXN-201ENST00000377270 IGSF3O75054 1194 aa19.14■□□□□ 0.65
FXN-201ENST00000377270 PRKAR2BP31323 418 aa19.14■□□□□ 0.65
FXN-201ENST00000377270 SMC4Q9NTJ3 1288 aa19.14■□□□□ 0.65
FXN-201ENST00000377270 PCDHB15Q9Y5E8 787 aa19.14■□□□□ 0.65
FXN-201ENST00000377270 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
FXN-201ENST00000377270 EDC4Q6P2E9 1401 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms