RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 EXOSC9Q06265 439 aaKnown RBP22.58■■□□□ 1.2
NKX2-2-201ENST00000377142 CENPQQ7L2Z9 268 aaPredicted RBP22.58■■□□□ 1.2
NKX2-2-201ENST00000377142 FRAT1Q92837 279 aaPredicted RBP22.57■■□□□ 1.2
NKX2-2-201ENST00000377142 MAP3K19Q56UN5 1328 aa22.56■■□□□ 1.2
NKX2-2-201ENST00000377142 TCERG1O14776 1098 aaKnown RBP22.56■■□□□ 1.2
NKX2-2-201ENST00000377142 PHF8Q9UPP1 1060 aa22.56■■□□□ 1.2
NKX2-2-201ENST00000377142 ARHGEF10O15013 1369 aa22.55■■□□□ 1.2
NKX2-2-201ENST00000377142 KIF24Q5T7B8 1368 aa22.55■■□□□ 1.2
NKX2-2-201ENST00000377142 AAMPQ13685 434 aa22.54■■□□□ 1.2
NKX2-2-201ENST00000377142 HSP90AB2PQ58FF8 381 aa22.54■■□□□ 1.2
NKX2-2-201ENST00000377142 PANK1Q8TE04 598 aa22.53■■□□□ 1.2
NKX2-2-201ENST00000377142 BCL2L13Q9BXK5 485 aa22.53■■□□□ 1.2
NKX2-2-201ENST00000377142 NLRP6P59044 892 aa22.53■■□□□ 1.2
NKX2-2-201ENST00000377142 SOX12O15370 315 aa22.52■■□□□ 1.2
NKX2-2-201ENST00000377142 SULT6B1Q6IMI4 303 aa22.52■■□□□ 1.2
NKX2-2-201ENST00000377142 IFT57Q9NWB7 429 aa22.52■■□□□ 1.2
NKX2-2-201ENST00000377142 MS4A1P11836 297 aa22.51■■□□□ 1.19
NKX2-2-201ENST00000377142 GNAI1P63096 354 aa22.51■■□□□ 1.19
NKX2-2-201ENST00000377142 SMC4Q9NTJ3 1288 aa22.51■■□□□ 1.19
NKX2-2-201ENST00000377142 COG6Q9Y2V7 657 aa22.51■■□□□ 1.19
NKX2-2-201ENST00000377142 ZKSCAN2Q63HK3 967 aa22.5■■□□□ 1.19
NKX2-2-201ENST00000377142 ZNF428Q96B54 188 aa22.5■■□□□ 1.19
NKX2-2-201ENST00000377142 AEBP1Q8IUX7 1158 aa22.5■■□□□ 1.19
NKX2-2-201ENST00000377142 CLUAP1Q96AJ1 413 aa22.5■■□□□ 1.19
NKX2-2-201ENST00000377142 AMPHP49418 695 aa22.49■■□□□ 1.19
NKX2-2-201ENST00000377142 ABTB2Q8N961 1025 aa22.49■■□□□ 1.19
NKX2-2-201ENST00000377142 RBM33Q96EV2 1170 aaKnown RBP22.48■■□□□ 1.19
NKX2-2-201ENST00000377142 ZNF853P0CG23 659 aa22.48■■□□□ 1.19
NKX2-2-201ENST00000377142 ALDH1L2Q3SY69 923 aa22.48■■□□□ 1.19
NKX2-2-201ENST00000377142 C14orf37Q86TY3 774 aa22.48■■□□□ 1.19
NKX2-2-201ENST00000377142 SSH1Q8WYL5 1049 aa22.48■■□□□ 1.19
NKX2-2-201ENST00000377142 KDRP35968 1356 aa22.47■■□□□ 1.19
NKX2-2-201ENST00000377142 KIF16BQ96L93 1317 aa22.47■■□□□ 1.19
NKX2-2-201ENST00000377142 RTL1A6NKG5 1358 aa22.47■■□□□ 1.19
NKX2-2-201ENST00000377142 LTN1O94822 1766 aa22.47■■□□□ 1.19
NKX2-2-201ENST00000377142 PAK3O75914 559 aaPredicted RBP22.46■■□□□ 1.19
NKX2-2-201ENST00000377142 THUMPD2Q9BTF0 503 aaKnown RBP22.46■■□□□ 1.19
NKX2-2-201ENST00000377142 RLBP1P12271 317 aa22.46■■□□□ 1.19
NKX2-2-201ENST00000377142 LAS1LQ9Y4W2 734 aaKnown RBP22.46■■□□□ 1.19
NKX2-2-201ENST00000377142 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
NKX2-2-201ENST00000377142 ESCO1Q5FWF5 840 aa22.45■■□□□ 1.18
NKX2-2-201ENST00000377142 CFAP44Q96MT7 982 aa22.45■■□□□ 1.18
NKX2-2-201ENST00000377142 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
NKX2-2-201ENST00000377142 FTSJ3Q8IY81 847 aaKnown RBP22.45■■□□□ 1.18
NKX2-2-201ENST00000377142 DZIP1LQ8IYY4 767 aaKnown RBP22.45■■□□□ 1.18
NKX2-2-201ENST00000377142 NFAT5O94916 1531 aa22.43■■□□□ 1.18
NKX2-2-201ENST00000377142 TNNQ9UQP3 1299 aa22.43■■□□□ 1.18
NKX2-2-201ENST00000377142 MVPQ14764 893 aaKnown RBP22.43■■□□□ 1.18
NKX2-2-201ENST00000377142 NUTM2GQ5VZR2 741 aa22.43■■□□□ 1.18
NKX2-2-201ENST00000377142 PHRF1Q9P1Y6 1649 aaKnown RBP22.42■■□□□ 1.18
NKX2-2-201ENST00000377142 HOXC9P31274 260 aa22.42■■□□□ 1.18
NKX2-2-201ENST00000377142 BRPF1P55201 1214 aaPredicted RBP22.42■■□□□ 1.18
NKX2-2-201ENST00000377142 MBIPQ9NS73 344 aa22.42■■□□□ 1.18
NKX2-2-201ENST00000377142 PSME1Q06323 249 aa22.42■■□□□ 1.18
NKX2-2-201ENST00000377142 ATF7IPQ6VMQ6 1270 aa22.42■■□□□ 1.18
NKX2-2-201ENST00000377142 PROSER2Q86WR7 435 aaPredicted RBP22.42■■□□□ 1.18
NKX2-2-201ENST00000377142 IPO8O15397 1037 aaKnown RBP22.41■■□□□ 1.18
NKX2-2-201ENST00000377142 FAM83GA6ND36 823 aa22.4■■□□□ 1.18
NKX2-2-201ENST00000377142 TRIM27P14373 513 aa22.4■■□□□ 1.18
NKX2-2-201ENST00000377142 EYA1Q99502 592 aa22.39■■□□□ 1.17
NKX2-2-201ENST00000377142 TRPM3Q9HCF6 1732 aaPredicted RBP22.39■■□□□ 1.17
NKX2-2-201ENST00000377142 NOB1Q9ULX3 412 aaKnown RBP22.38■■□□□ 1.17
NKX2-2-201ENST00000377142 VAMP4O75379 141 aa22.38■■□□□ 1.17
NKX2-2-201ENST00000377142 C1orf167Q5SNV9 1468 aa22.37■■□□□ 1.17
NKX2-2-201ENST00000377142 DCTN1Q14203 1278 aa22.37■■□□□ 1.17
NKX2-2-201ENST00000377142 KCNH5Q8NCM2 988 aa22.37■■□□□ 1.17
NKX2-2-201ENST00000377142 NCOA3Q9Y6Q9 1424 aa22.37■■□□□ 1.17
NKX2-2-201ENST00000377142 STRCP1A6NGW2 1772 aa22.36■■□□□ 1.17
NKX2-2-201ENST00000377142 SLIT3O75094 1523 aa22.36■■□□□ 1.17
NKX2-2-201ENST00000377142 C19orf44Q9H6X5 657 aa22.36■■□□□ 1.17
NKX2-2-201ENST00000377142 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
NKX2-2-201ENST00000377142 DCCP43146 1447 aa22.36■■□□□ 1.17
NKX2-2-201ENST00000377142 IGHDP01880 384 aa22.35■■□□□ 1.17
NKX2-2-201ENST00000377142 GAS2L2Q8NHY3 880 aa22.35■■□□□ 1.17
NKX2-2-201ENST00000377142 PDE4AP27815 886 aa22.35■■□□□ 1.17
NKX2-2-201ENST00000377142 TWISTNBQ3B726 338 aaPredicted RBP22.35■■□□□ 1.17
NKX2-2-201ENST00000377142 ORAI2Q96SN7 254 aa22.35■■□□□ 1.17
NKX2-2-201ENST00000377142 LRRC37A3O60309 1634 aa22.34■■□□□ 1.17
NKX2-2-201ENST00000377142 TSPYL6Q8N831 410 aa22.34■■□□□ 1.17
NKX2-2-201ENST00000377142 BACH2Q9BYV9 841 aa22.34■■□□□ 1.17
NKX2-2-201ENST00000377142 CRB1P82279 1406 aa22.33■■□□□ 1.17
NKX2-2-201ENST00000377142 HAP1P54257 671 aaPredicted RBP22.33■■□□□ 1.17
NKX2-2-201ENST00000377142 MTHFSDQ2M296 383 aaKnown RBP22.33■■□□□ 1.17
NKX2-2-201ENST00000377142 SKAP1Q86WV1 359 aa22.33■■□□□ 1.17
NKX2-2-201ENST00000377142 MRPL50Q8N5N7 158 aaKnown RBP22.32■■□□□ 1.16
NKX2-2-201ENST00000377142 IP6K1Q92551 441 aa22.32■■□□□ 1.16
NKX2-2-201ENST00000377142 ARHGAP45Q92619 1136 aa22.32■■□□□ 1.16
NKX2-2-201ENST00000377142 CHL1O00533 1208 aa22.32■■□□□ 1.16
NKX2-2-201ENST00000377142 MCM10Q7L590 875 aa22.32■■□□□ 1.16
NKX2-2-201ENST00000377142 ITPRIPQ8IWB1 547 aa22.32■■□□□ 1.16
NKX2-2-201ENST00000377142 PCDHB15Q9Y5E8 787 aa22.32■■□□□ 1.16
NKX2-2-201ENST00000377142 KIAA0232Q92628 1395 aa22.31■■□□□ 1.16
NKX2-2-201ENST00000377142 RTF1Q92541 710 aaKnown RBP22.31■■□□□ 1.16
NKX2-2-201ENST00000377142 FOXO3O43524 673 aa22.3■■□□□ 1.16
NKX2-2-201ENST00000377142 C8orf58Q8NAV2 365 aa22.3■■□□□ 1.16
NKX2-2-201ENST00000377142 MST1RQ04912 1400 aa22.3■■□□□ 1.16
NKX2-2-201ENST00000377142 TMEM94Q12767 1356 aa22.3■■□□□ 1.16
NKX2-2-201ENST00000377142 HTATSF1O43719 755 aaKnown RBP22.3■■□□□ 1.16
NKX2-2-201ENST00000377142 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
NKX2-2-201ENST00000377142 RWDD1Q9H446 243 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms