RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
GPC6-201ENST00000377047 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
GPC6-201ENST00000377047 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
GPC6-201ENST00000377047 STARD3NLO95772 234 aa16.29■□□□□ 0.2
GPC6-201ENST00000377047 ZSCAN29Q8IWY8 852 aaPredicted RBP16.29■□□□□ 0.2
GPC6-201ENST00000377047 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
GPC6-201ENST00000377047 NSD3Q9BZ95 1437 aa16.29■□□□□ 0.2
GPC6-201ENST00000377047 OFD1O75665 1012 aa16.28■□□□□ 0.2
GPC6-201ENST00000377047 CCDC141Q6ZP82 1450 aa16.28■□□□□ 0.2
GPC6-201ENST00000377047 ZFYVE27Q5T4F4 411 aa16.28■□□□□ 0.2
GPC6-201ENST00000377047 AACSQ86V21 672 aa16.28■□□□□ 0.2
GPC6-201ENST00000377047 WDR63Q8IWG1 891 aa16.28■□□□□ 0.2
GPC6-201ENST00000377047 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
GPC6-201ENST00000377047 KRT18P05783 430 aaKnown RBP16.27■□□□□ 0.2
GPC6-201ENST00000377047 ZSCAN25Q6NSZ9 544 aa16.27■□□□□ 0.2
GPC6-201ENST00000377047 NAT10Q9H0A0 1025 aaKnown RBP16.27■□□□□ 0.2
GPC6-201ENST00000377047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.2
GPC6-201ENST00000377047 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
GPC6-201ENST00000377047 PDILTQ8N807 584 aa16.27■□□□□ 0.19
GPC6-201ENST00000377047 ADGRL1O94910 1474 aa16.27■□□□□ 0.19
GPC6-201ENST00000377047 CCDC69A6NI79 296 aa16.27■□□□□ 0.19
GPC6-201ENST00000377047 PTCD1O75127 700 aaKnown RBP16.26■□□□□ 0.19
GPC6-201ENST00000377047 IGHMBP2P38935 993 aaKnown RBP16.26■□□□□ 0.19
GPC6-201ENST00000377047 TXLNAP40222 546 aa16.26■□□□□ 0.19
GPC6-201ENST00000377047 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
GPC6-201ENST00000377047 TNNT3P45378 269 aaPredicted RBP16.26■□□□□ 0.19
GPC6-201ENST00000377047 RAI14Q9P0K7 980 aa16.26■□□□□ 0.19
GPC6-201ENST00000377047 STK3Q13188 491 aa16.26■□□□□ 0.19
GPC6-201ENST00000377047 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
GPC6-201ENST00000377047 GPS2Q13227 327 aa16.26■□□□□ 0.19
GPC6-201ENST00000377047 CEBPAP49715 358 aaPredicted RBP16.26■□□□□ 0.19
GPC6-201ENST00000377047 NUP133Q8WUM0 1156 aa16.26■□□□□ 0.19
GPC6-201ENST00000377047 FCHSD2O94868 740 aa16.25■□□□□ 0.19
GPC6-201ENST00000377047 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
GPC6-201ENST00000377047 USHBP1Q8N6Y0 703 aa16.25■□□□□ 0.19
GPC6-201ENST00000377047 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
GPC6-201ENST00000377047 CEBPZQ03701 1054 aaKnown RBP16.25■□□□□ 0.19
GPC6-201ENST00000377047 KIF14Q15058 1648 aa16.25■□□□□ 0.19
GPC6-201ENST00000377047 ZPR1O75312 459 aa16.24■□□□□ 0.19
GPC6-201ENST00000377047 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
GPC6-201ENST00000377047 NFE2L2Q16236 605 aa16.24■□□□□ 0.19
GPC6-201ENST00000377047 TDO2P48775 406 aa16.24■□□□□ 0.19
GPC6-201ENST00000377047 CYP46A1Q9Y6A2 500 aa16.24■□□□□ 0.19
GPC6-201ENST00000377047 LRP2BPQ9P2M1 347 aa16.23■□□□□ 0.19
GPC6-201ENST00000377047 ZNF652Q9Y2D9 606 aa16.23■□□□□ 0.19
GPC6-201ENST00000377047 AMOTL2Q9Y2J4 779 aa16.23■□□□□ 0.19
GPC6-201ENST00000377047 FBXO31Q5XUX0 539 aaPredicted RBP16.23■□□□□ 0.19
GPC6-201ENST00000377047 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
GPC6-201ENST00000377047 ZNF396Q96N95 335 aaPredicted RBP16.23■□□□□ 0.19
GPC6-201ENST00000377047 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
GPC6-201ENST00000377047 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
GPC6-201ENST00000377047 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
GPC6-201ENST00000377047 PDCP20941 246 aa16.22■□□□□ 0.19
GPC6-201ENST00000377047 MCM10Q7L590 875 aa16.22■□□□□ 0.19
GPC6-201ENST00000377047 KINO60870 393 aaKnown RBP16.22■□□□□ 0.19
GPC6-201ENST00000377047 STK38Q15208 465 aa16.22■□□□□ 0.19
GPC6-201ENST00000377047 SOGA3Q5TF21 947 aa16.22■□□□□ 0.19
GPC6-201ENST00000377047 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
GPC6-201ENST00000377047 FOXO3O43524 673 aa16.22■□□□□ 0.19
GPC6-201ENST00000377047 IFT57Q9NWB7 429 aa16.22■□□□□ 0.19
GPC6-201ENST00000377047 MCM2P49736 904 aa16.21■□□□□ 0.19
GPC6-201ENST00000377047 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
GPC6-201ENST00000377047 NGLY1Q96IV0 654 aa16.21■□□□□ 0.19
GPC6-201ENST00000377047 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
GPC6-201ENST00000377047 MAGEC2Q9UBF1 373 aaPredicted RBP16.21■□□□□ 0.19
GPC6-201ENST00000377047 HMGB2P26583 209 aaKnown RBP16.21■□□□□ 0.19
GPC6-201ENST00000377047 HSP90AB2PQ58FF8 381 aa16.21■□□□□ 0.19
GPC6-201ENST00000377047 RABEP1Q15276 862 aa16.21■□□□□ 0.18
GPC6-201ENST00000377047 IL1RAPL2Q9NP60 686 aa16.21■□□□□ 0.18
GPC6-201ENST00000377047 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
GPC6-201ENST00000377047 IDH1O75874 414 aaKnown RBP16.2■□□□□ 0.18
GPC6-201ENST00000377047 METTL24Q5JXM2 366 aa16.2■□□□□ 0.18
GPC6-201ENST00000377047 NME9Q86XW9 330 aa16.2■□□□□ 0.18
GPC6-201ENST00000377047 TMPOP42166 694 aaKnown RBP16.2■□□□□ 0.18
GPC6-201ENST00000377047 ZHX3Q9H4I2 956 aa16.2■□□□□ 0.18
GPC6-201ENST00000377047 TTLL5Q6EMB2 1281 aa16.19■□□□□ 0.18
GPC6-201ENST00000377047 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
GPC6-201ENST00000377047 ANKRD1Q15327 319 aa16.19■□□□□ 0.18
GPC6-201ENST00000377047 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
GPC6-201ENST00000377047 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
GPC6-201ENST00000377047 DUSP27Q5VZP5 1158 aa16.19■□□□□ 0.18
GPC6-201ENST00000377047 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
GPC6-201ENST00000377047 TMOD2Q9NZR1 351 aa16.19■□□□□ 0.18
GPC6-201ENST00000377047 BRPF1P55201 1214 aaPredicted RBP16.18■□□□□ 0.18
GPC6-201ENST00000377047 UBAC1Q9BSL1 405 aa16.18■□□□□ 0.18
GPC6-201ENST00000377047 FIBPO43427 364 aa16.18■□□□□ 0.18
GPC6-201ENST00000377047 DCTN1Q14203 1278 aa16.18■□□□□ 0.18
GPC6-201ENST00000377047 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
GPC6-201ENST00000377047 SMC2O95347 1197 aa16.18■□□□□ 0.18
GPC6-201ENST00000377047 CWC27Q6UX04 472 aaKnown RBP16.18■□□□□ 0.18
GPC6-201ENST00000377047 MPHOSPH10O00566 681 aaKnown RBP16.18■□□□□ 0.18
GPC6-201ENST00000377047 MYD88Q99836 296 aa16.18■□□□□ 0.18
GPC6-201ENST00000377047 RNF214Q8ND24 703 aa16.17■□□□□ 0.18
GPC6-201ENST00000377047 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
GPC6-201ENST00000377047 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
GPC6-201ENST00000377047 CHD1LQ86WJ1 897 aa16.17■□□□□ 0.18
GPC6-201ENST00000377047 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
GPC6-201ENST00000377047 GRIN2AQ12879 1464 aa16.17■□□□□ 0.18
GPC6-201ENST00000377047 CUL7Q14999 1698 aa16.17■□□□□ 0.18
GPC6-201ENST00000377047 PIBF1Q8WXW3 757 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms