RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 SETBP1Q9Y6X0 1596 aa25.32■■□□□ 1.64
TMEFF1-201ENST00000374879 PTMAP06454 111 aaKnown RBP25.31■■□□□ 1.64
TMEFF1-201ENST00000374879 ZBTB40Q9NUA8 1239 aa25.31■■□□□ 1.64
TMEFF1-201ENST00000374879 NSD3Q9BZ95 1437 aa25.3■■□□□ 1.64
TMEFF1-201ENST00000374879 TSR2Q969E8 191 aaKnown RBP25.3■■□□□ 1.64
TMEFF1-201ENST00000374879 C14orf93Q9H972 538 aaKnown RBP25.3■■□□□ 1.64
TMEFF1-201ENST00000374879 NSFL1CQ9UNZ2 370 aaKnown RBP25.3■■□□□ 1.64
TMEFF1-201ENST00000374879 NPM1P06748 294 aaKnown RBP eCLIP25.29■■□□□ 1.64
TMEFF1-201ENST00000374879 TMEM57Q8N5G2 664 aa25.29■■□□□ 1.64
TMEFF1-201ENST00000374879 SLC12A5Q9H2X9 1139 aa25.29■■□□□ 1.64
TMEFF1-201ENST00000374879 SHPRHQ149N8 1683 aa25.29■■□□□ 1.64
TMEFF1-201ENST00000374879 CCDC27Q2M243 656 aa25.29■■□□□ 1.64
TMEFF1-201ENST00000374879 TMEM132EQ6IEE7 984 aa25.29■■□□□ 1.64
TMEFF1-201ENST00000374879 ATF7IPQ6VMQ6 1270 aa25.29■■□□□ 1.64
TMEFF1-201ENST00000374879 PRIMPOLQ96LW4 560 aa25.29■■□□□ 1.64
TMEFF1-201ENST00000374879 MORC1Q86VD1 984 aa25.28■■□□□ 1.64
TMEFF1-201ENST00000374879 CHAMP1Q96JM3 812 aa25.28■■□□□ 1.64
TMEFF1-201ENST00000374879 BCL11BQ9C0K0 894 aaPredicted RBP25.28■■□□□ 1.64
TMEFF1-201ENST00000374879 GTF2F1P35269 517 aaKnown RBP eCLIP25.27■■□□□ 1.64
TMEFF1-201ENST00000374879 SSH1Q8WYL5 1049 aa25.27■■□□□ 1.64
TMEFF1-201ENST00000374879 SPDYE4A6NLX3 237 aa25.27■■□□□ 1.64
TMEFF1-201ENST00000374879 NOB1Q9ULX3 412 aaKnown RBP25.27■■□□□ 1.64
TMEFF1-201ENST00000374879 POGZQ7Z3K3 1410 aa25.26■■□□□ 1.63
TMEFF1-201ENST00000374879 MPNDQ8N594 471 aa25.26■■□□□ 1.63
TMEFF1-201ENST00000374879 TMEM51Q9NW97 253 aa25.26■■□□□ 1.63
TMEFF1-201ENST00000374879 PPLO60437 1756 aa25.26■■□□□ 1.63
TMEFF1-201ENST00000374879 FRMPD1Q5SYB0 1578 aa25.26■■□□□ 1.63
TMEFF1-201ENST00000374879 CD109Q6YHK3 1445 aa25.25■■□□□ 1.63
TMEFF1-201ENST00000374879 HMGN5P82970 282 aaKnown RBP25.25■■□□□ 1.63
TMEFF1-201ENST00000374879 QRICH2Q9H0J4 1663 aa25.25■■□□□ 1.63
TMEFF1-201ENST00000374879 EXOSC9Q06265 439 aaKnown RBP25.25■■□□□ 1.63
TMEFF1-201ENST00000374879 ANKRD45Q5TZF3 282 aa25.24■■□□□ 1.63
TMEFF1-201ENST00000374879 ADGRB1O14514 1584 aa25.24■■□□□ 1.63
TMEFF1-201ENST00000374879 ZNF830Q96NB3 372 aaPredicted RBP25.24■■□□□ 1.63
TMEFF1-201ENST00000374879 IGSF3O75054 1194 aa25.23■■□□□ 1.63
TMEFF1-201ENST00000374879 NAP1L2Q9ULW6 460 aaPredicted RBP25.23■■□□□ 1.63
TMEFF1-201ENST00000374879 MLH3Q9UHC1 1453 aa25.23■■□□□ 1.63
TMEFF1-201ENST00000374879 ZDHHC9Q9Y397 364 aa25.22■■□□□ 1.63
TMEFF1-201ENST00000374879 KIF3AQ9Y496 699 aa25.22■■□□□ 1.63
TMEFF1-201ENST00000374879 ZC3H13Q5T200 1668 aaKnown RBP25.22■■□□□ 1.63
TMEFF1-201ENST00000374879 CFAP74Q9C0B2 1584 aa25.22■■□□□ 1.63
TMEFF1-201ENST00000374879 NOLC1Q14978 699 aaKnown RBP eCLIP25.22■■□□□ 1.63
TMEFF1-201ENST00000374879 ZGPATQ8N5A5 531 aaKnown RBP25.21■■□□□ 1.63
TMEFF1-201ENST00000374879 PIBF1Q8WXW3 757 aa25.21■■□□□ 1.63
TMEFF1-201ENST00000374879 BCL2L12Q9HB09 334 aa25.21■■□□□ 1.63
TMEFF1-201ENST00000374879 RABEP1Q15276 862 aa25.2■■□□□ 1.63
TMEFF1-201ENST00000374879 C17orf53Q8N3J3 647 aaPredicted RBP25.2■■□□□ 1.63
TMEFF1-201ENST00000374879 RPGRIP1LQ68CZ1 1315 aa25.2■■□□□ 1.62
TMEFF1-201ENST00000374879 HECW2Q9P2P5 1572 aa25.2■■□□□ 1.62
TMEFF1-201ENST00000374879 CT47B1P0C2W7 299 aaPredicted RBP25.19■■□□□ 1.62
TMEFF1-201ENST00000374879 CHMP4BQ9H444 224 aaKnown RBP25.19■■□□□ 1.62
TMEFF1-201ENST00000374879 NUTM2DQ5VT03 806 aaPredicted RBP25.19■■□□□ 1.62
TMEFF1-201ENST00000374879 ABCC3O15438 1527 aa25.18■■□□□ 1.62
TMEFF1-201ENST00000374879 PDCL2Q8N4E4 241 aa25.17■■□□□ 1.62
TMEFF1-201ENST00000374879 CWC22Q9HCG8 908 aaKnown RBP25.17■■□□□ 1.62
TMEFF1-201ENST00000374879 TSPY26PQ9H489 355 aa25.16■■□□□ 1.62
TMEFF1-201ENST00000374879 CDC45O75419 566 aa25.15■■□□□ 1.62
TMEFF1-201ENST00000374879 MTHFSP49914 203 aa25.15■■□□□ 1.62
TMEFF1-201ENST00000374879 U2AF2P26368 475 aaKnown RBP eCLIP25.15■■□□□ 1.62
TMEFF1-201ENST00000374879 FOXD4L5Q5VV16 416 aaPredicted RBP25.15■■□□□ 1.62
TMEFF1-201ENST00000374879 FOXD4L4Q8WXT5 416 aaPredicted RBP25.15■■□□□ 1.62
TMEFF1-201ENST00000374879 TTC12Q9H892 705 aaPredicted RBP25.14■■□□□ 1.62
TMEFF1-201ENST00000374879 CGNQ9P2M7 1197 aaKnown RBP25.13■■□□□ 1.61
TMEFF1-201ENST00000374879 GLI2P10070 1586 aa25.12■■□□□ 1.61
TMEFF1-201ENST00000374879 RAPGEF3O95398 923 aa25.12■■□□□ 1.61
TMEFF1-201ENST00000374879 EVC2Q86UK5 1308 aa25.12■■□□□ 1.61
TMEFF1-201ENST00000374879 VGLL3A8MV65 326 aa25.12■■□□□ 1.61
TMEFF1-201ENST00000374879 ZBTB22O15209 634 aa25.12■■□□□ 1.61
TMEFF1-201ENST00000374879 CAMSAP1Q5T5Y3 1602 aa25.11■■□□□ 1.61
TMEFF1-201ENST00000374879 VGFO15240 615 aaPredicted RBP25.11■■□□□ 1.61
TMEFF1-201ENST00000374879 FKBP5Q13451 457 aaPredicted RBP25.11■■□□□ 1.61
TMEFF1-201ENST00000374879 USP32Q8NFA0 1604 aa25.11■■□□□ 1.61
TMEFF1-201ENST00000374879 CFAP53Q96M91 514 aa25.11■■□□□ 1.61
TMEFF1-201ENST00000374879 SIGLEC1Q9BZZ2 1709 aa25.11■■□□□ 1.61
TMEFF1-201ENST00000374879 MBD3O95983 291 aa25.1■■□□□ 1.61
TMEFF1-201ENST00000374879 U2AF1L5P0DN76 240 aaPredicted RBP25.1■■□□□ 1.61
TMEFF1-201ENST00000374879 U2AF1Q01081 240 aaKnown RBP eCLIP25.1■■□□□ 1.61
TMEFF1-201ENST00000374879 PPIP5K1Q6PFW1 1433 aa25.1■■□□□ 1.61
TMEFF1-201ENST00000374879 GCC1Q96CN9 775 aa25.1■■□□□ 1.61
TMEFF1-201ENST00000374879 C1orf115Q9H7X2 142 aa25.1■■□□□ 1.61
TMEFF1-201ENST00000374879 TAF3Q5VWG9 929 aa25.1■■□□□ 1.61
TMEFF1-201ENST00000374879 GSPT1P15170 499 aaKnown RBP25.09■■□□□ 1.61
TMEFF1-201ENST00000374879 USP26Q9BXU7 913 aa25.08■■□□□ 1.61
TMEFF1-201ENST00000374879 SPTLC3Q9NUV7 552 aa25.08■■□□□ 1.61
TMEFF1-201ENST00000374879 IPO8O15397 1037 aaKnown RBP25.08■■□□□ 1.61
TMEFF1-201ENST00000374879 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
TMEFF1-201ENST00000374879 TULP4Q9NRJ4 1543 aa25.08■■□□□ 1.6
TMEFF1-201ENST00000374879 ANKRD36BQ8N2N9 1353 aa25.07■■□□□ 1.6
TMEFF1-201ENST00000374879 PDIA4P13667 645 aaKnown RBP25.07■■□□□ 1.6
TMEFF1-201ENST00000374879 ZNF771Q7L3S4 317 aaPredicted RBP25.07■■□□□ 1.6
TMEFF1-201ENST00000374879 SAFB2Q14151 953 aaKnown RBP eCLIP25.07■■□□□ 1.6
TMEFF1-201ENST00000374879 NCBP3Q53F19 620 aaKnown RBP25.07■■□□□ 1.6
TMEFF1-201ENST00000374879 CABP2Q9NPB3 220 aa25.07■■□□□ 1.6
TMEFF1-201ENST00000374879 NEXMIFQ5QGS0 1516 aa25.06■■□□□ 1.6
TMEFF1-201ENST00000374879 IPO4Q8TEX9 1081 aaKnown RBP25.06■■□□□ 1.6
TMEFF1-201ENST00000374879 USP25Q9UHP3 1055 aa25.06■■□□□ 1.6
TMEFF1-201ENST00000374879 ARHGEF28Q8N1W1 1705 aaKnown RBP25.06■■□□□ 1.6
TMEFF1-201ENST00000374879 ANKRD7Q92527 254 aa25.06■■□□□ 1.6
TMEFF1-201ENST00000374879 PUS7Q96PZ0 661 aaKnown RBP25.06■■□□□ 1.6
TMEFF1-201ENST00000374879 PIK3C2BO00750 1634 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms