RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 CASZ1Q86V15 1759 aa9.35□□□□□ -0.91
TCEA3-202ENST00000374602 ACEP12821 1306 aa9.34□□□□□ -0.91
TCEA3-202ENST00000374602 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
TCEA3-202ENST00000374602 NLRP13Q86W25 1043 aa9.34□□□□□ -0.91
TCEA3-202ENST00000374602 KAT6BQ8WYB5 2073 aa9.34□□□□□ -0.91
TCEA3-202ENST00000374602 USP19O94966 1318 aa9.33□□□□□ -0.92
TCEA3-202ENST00000374602 PPIP5K1Q6PFW1 1433 aa9.33□□□□□ -0.92
TCEA3-202ENST00000374602 KCNQ2O43526 872 aa9.33□□□□□ -0.92
TCEA3-202ENST00000374602 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
TCEA3-202ENST00000374602 CDK19Q9BWU1 502 aa9.33□□□□□ -0.92
TCEA3-202ENST00000374602 MYOM1P52179 1685 aa9.32□□□□□ -0.92
TCEA3-202ENST00000374602 SLIT3O75094 1523 aa9.32□□□□□ -0.92
TCEA3-202ENST00000374602 ZBTB7CA1YPR0 619 aa9.32□□□□□ -0.92
TCEA3-202ENST00000374602 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
TCEA3-202ENST00000374602 PIK3C2AO00443 1686 aa9.32□□□□□ -0.92
TCEA3-202ENST00000374602 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
TCEA3-202ENST00000374602 TRPM1Q7Z4N2 1603 aa9.31□□□□□ -0.92
TCEA3-202ENST00000374602 PLEKHG3A1L390 1219 aa9.31□□□□□ -0.92
TCEA3-202ENST00000374602 DDB1Q16531 1140 aa9.31□□□□□ -0.92
TCEA3-202ENST00000374602 TIMELESSQ9UNS1 1208 aa9.31□□□□□ -0.92
TCEA3-202ENST00000374602 GCP02774 474 aa9.3□□□□□ -0.92
TCEA3-202ENST00000374602 SAMD1Q6SPF0 538 aaPredicted RBP9.3□□□□□ -0.92
TCEA3-202ENST00000374602 TOM1L2Q6ZVM7 507 aa9.3□□□□□ -0.92
TCEA3-202ENST00000374602 CDCA7Q9BWT1 371 aaPredicted RBP9.3□□□□□ -0.92
TCEA3-202ENST00000374602 ABCC6O95255 1503 aa9.3□□□□□ -0.92
TCEA3-202ENST00000374602 USP6P35125 1406 aa9.3□□□□□ -0.92
TCEA3-202ENST00000374602 CENPJQ9HC77 1338 aaPredicted RBP9.3□□□□□ -0.92
TCEA3-202ENST00000374602 NHSQ6T4R5 1651 aa9.29□□□□□ -0.92
TCEA3-202ENST00000374602 AATKQ6ZMQ8 1374 aa9.29□□□□□ -0.92
TCEA3-202ENST00000374602 PLSCR1O15162 318 aa9.29□□□□□ -0.92
TCEA3-202ENST00000374602 BCL11BQ9C0K0 894 aaPredicted RBP9.29□□□□□ -0.92
TCEA3-202ENST00000374602 COL18A1P39060 1754 aa9.29□□□□□ -0.92
TCEA3-202ENST00000374602 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
TCEA3-202ENST00000374602 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
TCEA3-202ENST00000374602 NEUROD1Q13562 356 aa9.28□□□□□ -0.92
TCEA3-202ENST00000374602 STK32BQ9NY57 414 aa9.28□□□□□ -0.92
TCEA3-202ENST00000374602 UTRNP46939 3433 aa9.28□□□□□ -0.92
TCEA3-202ENST00000374602 WDR17Q8IZU2 1322 aa9.28□□□□□ -0.92
TCEA3-202ENST00000374602 LTN1O94822 1766 aa9.27□□□□□ -0.92
TCEA3-202ENST00000374602 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
TCEA3-202ENST00000374602 NLRP6P59044 892 aa9.27□□□□□ -0.93
TCEA3-202ENST00000374602 KCNH5Q8NCM2 988 aa9.27□□□□□ -0.93
TCEA3-202ENST00000374602 SIN3AQ96ST3 1273 aa9.27□□□□□ -0.93
TCEA3-202ENST00000374602 U3KPZ7 1027 aaPredicted RBP9.27□□□□□ -0.93
TCEA3-202ENST00000374602 BCL9O00512 1426 aa9.27□□□□□ -0.93
TCEA3-202ENST00000374602 TNS2Q63HR2 1409 aa9.27□□□□□ -0.93
TCEA3-202ENST00000374602 MON2Q7Z3U7 1717 aa9.26□□□□□ -0.93
TCEA3-202ENST00000374602 BTAF1O14981 1849 aa9.26□□□□□ -0.93
TCEA3-202ENST00000374602 FAM208AQ9UK61 1670 aaKnown RBP9.26□□□□□ -0.93
TCEA3-202ENST00000374602 CCDC7Q96M83 1385 aa9.25□□□□□ -0.93
TCEA3-202ENST00000374602 QSER1Q2KHR3 1735 aa9.25□□□□□ -0.93
TCEA3-202ENST00000374602 ANO8Q9HCE9 1232 aaPredicted RBP9.25□□□□□ -0.93
TCEA3-202ENST00000374602 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
TCEA3-202ENST00000374602 USP54Q70EL1 1684 aa9.24□□□□□ -0.93
TCEA3-202ENST00000374602 ZBTB7AO95365 584 aa9.24□□□□□ -0.93
TCEA3-202ENST00000374602 CABP2Q9NPB3 220 aa9.24□□□□□ -0.93
TCEA3-202ENST00000374602 TTC21AQ8NDW8 1320 aa9.24□□□□□ -0.93
TCEA3-202ENST00000374602 MTFR1LQ9H019 292 aa9.23□□□□□ -0.93
TCEA3-202ENST00000374602 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
TCEA3-202ENST00000374602 NFAT5O94916 1531 aa9.22□□□□□ -0.93
TCEA3-202ENST00000374602 EXOC5O00471 708 aa9.22□□□□□ -0.93
TCEA3-202ENST00000374602 SOX12O15370 315 aa9.22□□□□□ -0.93
TCEA3-202ENST00000374602 TXNRD1Q16881 649 aa9.22□□□□□ -0.93
TCEA3-202ENST00000374602 ZNF692Q9BU19 519 aaPredicted RBP9.22□□□□□ -0.93
TCEA3-202ENST00000374602 CARD10Q9BWT7 1032 aa9.22□□□□□ -0.93
TCEA3-202ENST00000374602 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
TCEA3-202ENST00000374602 SLC15A2Q16348 729 aa9.21□□□□□ -0.94
TCEA3-202ENST00000374602 MARCH10Q8NA82 808 aaPredicted RBP9.21□□□□□ -0.94
TCEA3-202ENST00000374602 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
TCEA3-202ENST00000374602 FHDC1Q9C0D6 1143 aaPredicted RBP9.21□□□□□ -0.94
TCEA3-202ENST00000374602 ATF5Q9Y2D1 282 aaPredicted RBP9.21□□□□□ -0.94
TCEA3-202ENST00000374602 SENP3-EIF4A1A0A087X0R7 540 aa9.2□□□□□ -0.94
TCEA3-202ENST00000374602 NBPF1Q3BBV0 1214 aa9.2□□□□□ -0.94
TCEA3-202ENST00000374602 ROCK2O75116 1388 aaKnown RBP9.2□□□□□ -0.94
TCEA3-202ENST00000374602 KTN1Q86UP2 1357 aaKnown RBP9.2□□□□□ -0.94
TCEA3-202ENST00000374602 MAP3K5Q99683 1374 aa9.2□□□□□ -0.94
TCEA3-202ENST00000374602 TUBGCP6Q96RT7 1819 aa9.19□□□□□ -0.94
TCEA3-202ENST00000374602 PTGER2P43116 358 aa9.19□□□□□ -0.94
TCEA3-202ENST00000374602 ARHGEF25Q86VW2 580 aa9.19□□□□□ -0.94
TCEA3-202ENST00000374602 ARXQ96QS3 562 aa9.19□□□□□ -0.94
TCEA3-202ENST00000374602 SYT17Q9BSW7 474 aa9.19□□□□□ -0.94
TCEA3-202ENST00000374602 TTC21BQ7Z4L5 1316 aa9.19□□□□□ -0.94
TCEA3-202ENST00000374602 DOT1LQ8TEK3 1739 aa9.19□□□□□ -0.94
TCEA3-202ENST00000374602 ERBB3P21860 1342 aa9.18□□□□□ -0.94
TCEA3-202ENST00000374602 POLD1P28340 1107 aa9.18□□□□□ -0.94
TCEA3-202ENST00000374602 L3MBTL2Q969R5 705 aa9.18□□□□□ -0.94
TCEA3-202ENST00000374602 AXIN2Q9Y2T1 843 aa9.18□□□□□ -0.94
TCEA3-202ENST00000374602 COL24A1Q17RW2 1714 aa9.17□□□□□ -0.94
TCEA3-202ENST00000374602 IL2RBP14784 551 aa9.17□□□□□ -0.94
TCEA3-202ENST00000374602 GPR162Q16538 588 aa9.17□□□□□ -0.94
TCEA3-202ENST00000374602 KLHL34Q8N239 644 aa9.17□□□□□ -0.94
TCEA3-202ENST00000374602 PDGFDQ9GZP0 370 aaPredicted RBP9.17□□□□□ -0.94
TCEA3-202ENST00000374602 RNF39Q9H2S5 420 aa9.17□□□□□ -0.94
TCEA3-202ENST00000374602 NLRP2Q9NX02 1062 aa9.17□□□□□ -0.94
TCEA3-202ENST00000374602 LY75O60449 1722 aa9.17□□□□□ -0.94
TCEA3-202ENST00000374602 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
TCEA3-202ENST00000374602 GIGYF1O75420 1035 aaPredicted RBP9.16□□□□□ -0.94
TCEA3-202ENST00000374602 C1QTNF8P60827 252 aa9.16□□□□□ -0.94
TCEA3-202ENST00000374602 PTF1AQ7RTS3 328 aa9.16□□□□□ -0.94
TCEA3-202ENST00000374602 PROM2Q8N271 834 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms