RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 MFAP1P55081 439 aaKnown RBP22.57■■□□□ 1.2
PHF1-201ENST00000374512 PRKAR2BP31323 418 aa22.56■■□□□ 1.2
PHF1-201ENST00000374512 CPS1P31327 1500 aa22.56■■□□□ 1.2
PHF1-201ENST00000374512 RBM25P49756 843 aaKnown RBP22.55■■□□□ 1.2
PHF1-201ENST00000374512 PIK3R4Q99570 1358 aa22.55■■□□□ 1.2
PHF1-201ENST00000374512 MCM4P33991 863 aa22.54■■□□□ 1.2
PHF1-201ENST00000374512 TXNDC2Q86VQ3 553 aa22.54■■□□□ 1.2
PHF1-201ENST00000374512 HSCBQ8IWL3 235 aa22.54■■□□□ 1.2
PHF1-201ENST00000374512 GCC1Q96CN9 775 aa22.54■■□□□ 1.2
PHF1-201ENST00000374512 NFE2L2Q16236 605 aa22.53■■□□□ 1.2
PHF1-201ENST00000374512 CHD1LQ86WJ1 897 aa22.53■■□□□ 1.2
PHF1-201ENST00000374512 SNX21Q969T3 373 aa22.53■■□□□ 1.2
PHF1-201ENST00000374512 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
PHF1-201ENST00000374512 FBLN1P23142 703 aa22.52■■□□□ 1.2
PHF1-201ENST00000374512 BMP2KLQ5H9B9 411 aa22.52■■□□□ 1.2
PHF1-201ENST00000374512 MON2Q7Z3U7 1717 aa22.52■■□□□ 1.2
PHF1-201ENST00000374512 CDK12Q9NYV4 1490 aaPredicted RBP22.52■■□□□ 1.2
PHF1-201ENST00000374512 GNAI1P63096 354 aa22.51■■□□□ 1.19
PHF1-201ENST00000374512 AATKQ6ZMQ8 1374 aa22.51■■□□□ 1.19
PHF1-201ENST00000374512 IFT57Q9NWB7 429 aa22.51■■□□□ 1.19
PHF1-201ENST00000374512 NCOA3Q9Y6Q9 1424 aa22.51■■□□□ 1.19
PHF1-201ENST00000374512 NUDT16Q96DE0 195 aaKnown RBP22.5■■□□□ 1.19
PHF1-201ENST00000374512 ZBTB7BO15156 539 aaPredicted RBP22.49■■□□□ 1.19
PHF1-201ENST00000374512 NME9Q86XW9 330 aa22.49■■□□□ 1.19
PHF1-201ENST00000374512 EIF5BO60841 1220 aaKnown RBP22.49■■□□□ 1.19
PHF1-201ENST00000374512 VAMP4O75379 141 aa22.49■■□□□ 1.19
PHF1-201ENST00000374512 EMILIN1Q9Y6C2 1016 aa22.49■■□□□ 1.19
PHF1-201ENST00000374512 CCDC61Q9Y6R9 512 aa22.49■■□□□ 1.19
PHF1-201ENST00000374512 ADAMTS13Q76LX8 1427 aa22.48■■□□□ 1.19
PHF1-201ENST00000374512 IL13P35225 146 aa22.48■■□□□ 1.19
PHF1-201ENST00000374512 LMOD3Q0VAK6 560 aa22.48■■□□□ 1.19
PHF1-201ENST00000374512 MRPL50Q8N5N7 158 aaKnown RBP22.48■■□□□ 1.19
PHF1-201ENST00000374512 AKAP12Q02952 1782 aa22.48■■□□□ 1.19
PHF1-201ENST00000374512 ITSN1Q15811 1721 aa22.48■■□□□ 1.19
PHF1-201ENST00000374512 HMOX1P09601 288 aa22.47■■□□□ 1.19
PHF1-201ENST00000374512 PLEKHG1Q9ULL1 1385 aa22.47■■□□□ 1.19
PHF1-201ENST00000374512 COG3Q96JB2 828 aa22.47■■□□□ 1.19
PHF1-201ENST00000374512 ZNF853P0CG23 659 aa22.46■■□□□ 1.19
PHF1-201ENST00000374512 PHACTR3Q96KR7 559 aa22.46■■□□□ 1.19
PHF1-201ENST00000374512 CIZ1Q9ULV3 898 aaPredicted RBP22.46■■□□□ 1.19
PHF1-201ENST00000374512 DDX11L8A8MPP1 907 aa22.46■■□□□ 1.19
PHF1-201ENST00000374512 LNPKQ9C0E8 428 aa22.46■■□□□ 1.19
PHF1-201ENST00000374512 FSD2A1L4K1 749 aa22.45■■□□□ 1.18
PHF1-201ENST00000374512 C3P01024 1663 aa22.45■■□□□ 1.18
PHF1-201ENST00000374512 KIF24Q5T7B8 1368 aa22.45■■□□□ 1.18
PHF1-201ENST00000374512 DDIT3P35638 169 aa22.45■■□□□ 1.18
PHF1-201ENST00000374512 ANO8Q9HCE9 1232 aaPredicted RBP22.45■■□□□ 1.18
PHF1-201ENST00000374512 ABCC4O15439 1325 aa22.44■■□□□ 1.18
PHF1-201ENST00000374512 GOLGA6L3A6NEY3 463 aa22.44■■□□□ 1.18
PHF1-201ENST00000374512 ZNF692Q9BU19 519 aaPredicted RBP22.44■■□□□ 1.18
PHF1-201ENST00000374512 ISY1Q9ULR0 285 aaKnown RBP22.43■■□□□ 1.18
PHF1-201ENST00000374512 ROBO2Q9HCK4 1378 aa22.43■■□□□ 1.18
PHF1-201ENST00000374512 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
PHF1-201ENST00000374512 ZRANB1Q9UGI0 708 aa22.43■■□□□ 1.18
PHF1-201ENST00000374512 LTKP29376 864 aa22.42■■□□□ 1.18
PHF1-201ENST00000374512 SPRYD3Q8NCJ5 442 aa22.42■■□□□ 1.18
PHF1-201ENST00000374512 API5Q9BZZ5 524 aaKnown RBP22.42■■□□□ 1.18
PHF1-201ENST00000374512 DLG5Q8TDM6 1919 aa22.41■■□□□ 1.18
PHF1-201ENST00000374512 TRAK2O60296 914 aa22.41■■□□□ 1.18
PHF1-201ENST00000374512 CEBPAP49715 358 aaPredicted RBP22.41■■□□□ 1.18
PHF1-201ENST00000374512 ANKRD45Q5TZF3 282 aa22.41■■□□□ 1.18
PHF1-201ENST00000374512 NCKAP5LQ9HCH0 1330 aa22.4■■□□□ 1.18
PHF1-201ENST00000374512 PTMSP20962 102 aa22.4■■□□□ 1.18
PHF1-201ENST00000374512 THUMPD2Q9BTF0 503 aaKnown RBP22.39■■□□□ 1.18
PHF1-201ENST00000374512 FER1L4A9Z1Z3 1794 aa22.39■■□□□ 1.18
PHF1-201ENST00000374512 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.39■■□□□ 1.17
PHF1-201ENST00000374512 MBIPQ9NS73 344 aa22.39■■□□□ 1.17
PHF1-201ENST00000374512 EID1Q9Y6B2 187 aa22.39■■□□□ 1.17
PHF1-201ENST00000374512 SLIT1O75093 1534 aa22.38■■□□□ 1.17
PHF1-201ENST00000374512 HAP1P54257 671 aaPredicted RBP22.38■■□□□ 1.17
PHF1-201ENST00000374512 RRS1Q15050 365 aaKnown RBP22.38■■□□□ 1.17
PHF1-201ENST00000374512 PRR36Q9H6K5 1346 aa22.38■■□□□ 1.17
PHF1-201ENST00000374512 TWISTNBQ3B726 338 aaPredicted RBP22.38■■□□□ 1.17
PHF1-201ENST00000374512 ARHGAP23Q9P227 1491 aa22.37■■□□□ 1.17
PHF1-201ENST00000374512 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
PHF1-201ENST00000374512 XRCC6P12956 609 aaKnown RBP eCLIP22.36■■□□□ 1.17
PHF1-201ENST00000374512 TOPAZ1Q8N9V7 1692 aa22.35■■□□□ 1.17
PHF1-201ENST00000374512 NRKQ7Z2Y5 1582 aa22.35■■□□□ 1.17
PHF1-201ENST00000374512 HSP90AB1P08238 724 aaKnown RBP22.35■■□□□ 1.17
PHF1-201ENST00000374512 MRE11P49959 708 aa22.35■■□□□ 1.17
PHF1-201ENST00000374512 GBP4Q96PP9 640 aa22.35■■□□□ 1.17
PHF1-201ENST00000374512 SIRT2Q8IXJ6 389 aa22.34■■□□□ 1.17
PHF1-201ENST00000374512 KIF2CQ99661 725 aa22.34■■□□□ 1.17
PHF1-201ENST00000374512 SKOR2Q2VWA4 1001 aaPredicted RBP22.33■■□□□ 1.17
PHF1-201ENST00000374512 TBC1D9Q6ZT07 1266 aa22.33■■□□□ 1.17
PHF1-201ENST00000374512 PTPRUQ92729 1446 aa22.33■■□□□ 1.17
PHF1-201ENST00000374512 CDC45O75419 566 aa22.32■■□□□ 1.16
PHF1-201ENST00000374512 RAB3GAP1Q15042 981 aa22.32■■□□□ 1.16
PHF1-201ENST00000374512 SLC26A8Q96RN1 970 aa22.32■■□□□ 1.16
PHF1-201ENST00000374512 TTC21BQ7Z4L5 1316 aa22.31■■□□□ 1.16
PHF1-201ENST00000374512 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
PHF1-201ENST00000374512 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
PHF1-201ENST00000374512 C8orf58Q8NAV2 365 aa22.3■■□□□ 1.16
PHF1-201ENST00000374512 K7ELQ4 463 aaPredicted RBP22.3■■□□□ 1.16
PHF1-201ENST00000374512 ELL2O00472 640 aaPredicted RBP22.3■■□□□ 1.16
PHF1-201ENST00000374512 INTS3Q68E01 1043 aaKnown RBP22.3■■□□□ 1.16
PHF1-201ENST00000374512 THEMISQ8N1K5 641 aaPredicted RBP22.3■■□□□ 1.16
PHF1-201ENST00000374512 TNPO1Q92973 898 aaKnown RBP22.3■■□□□ 1.16
PHF1-201ENST00000374512 DCTPP1Q9H773 170 aa22.3■■□□□ 1.16
PHF1-201ENST00000374512 C1orf115Q9H7X2 142 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms