RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SLC4A3P48751 1232 aa20.44■□□□□ 0.86
CNKSR1-202ENST00000374253 ATF7IPQ6VMQ6 1270 aa20.44■□□□□ 0.86
CNKSR1-202ENST00000374253 CT47B1P0C2W7 299 aaPredicted RBP20.44■□□□□ 0.86
CNKSR1-202ENST00000374253 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
CNKSR1-202ENST00000374253 RBM33Q96EV2 1170 aaKnown RBP20.44■□□□□ 0.86
CNKSR1-202ENST00000374253 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
CNKSR1-202ENST00000374253 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
CNKSR1-202ENST00000374253 TMEM57Q8N5G2 664 aa20.43■□□□□ 0.86
CNKSR1-202ENST00000374253 FER1L4A9Z1Z3 1794 aa20.43■□□□□ 0.86
CNKSR1-202ENST00000374253 THEMISQ8N1K5 641 aaPredicted RBP20.42■□□□□ 0.86
CNKSR1-202ENST00000374253 PLEKHG3A1L390 1219 aa20.41■□□□□ 0.86
CNKSR1-202ENST00000374253 NGDNQ8NEJ9 315 aaKnown RBP20.41■□□□□ 0.86
CNKSR1-202ENST00000374253 MBIPQ9NS73 344 aa20.41■□□□□ 0.86
CNKSR1-202ENST00000374253 PDZRN3Q9UPQ7 1066 aa20.41■□□□□ 0.86
CNKSR1-202ENST00000374253 USP6P35125 1406 aa20.4■□□□□ 0.86
CNKSR1-202ENST00000374253 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
CNKSR1-202ENST00000374253 TBX22Q9Y458 520 aa20.4■□□□□ 0.86
CNKSR1-202ENST00000374253 KCNA6P17658 529 aa20.4■□□□□ 0.86
CNKSR1-202ENST00000374253 RWDD1Q9H446 243 aaPredicted RBP20.38■□□□□ 0.85
CNKSR1-202ENST00000374253 SEC24BO95487 1268 aa20.37■□□□□ 0.85
CNKSR1-202ENST00000374253 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
CNKSR1-202ENST00000374253 SLIT1O75093 1534 aa20.37■□□□□ 0.85
CNKSR1-202ENST00000374253 VAMP4O75379 141 aa20.36■□□□□ 0.85
CNKSR1-202ENST00000374253 RGPD8O14715 1765 aaPredicted RBP20.36■□□□□ 0.85
CNKSR1-202ENST00000374253 C8orf58Q8NAV2 365 aa20.36■□□□□ 0.85
CNKSR1-202ENST00000374253 OVOS2A0A0J9YW53 1432 aa20.36■□□□□ 0.85
CNKSR1-202ENST00000374253 OVOS2Q6IE36 1432 aa20.36■□□□□ 0.85
CNKSR1-202ENST00000374253 GNAI1P63096 354 aa20.35■□□□□ 0.85
CNKSR1-202ENST00000374253 MCM10Q7L590 875 aa20.35■□□□□ 0.85
CNKSR1-202ENST00000374253 DDX19BQ9UMR2 479 aa20.35■□□□□ 0.85
CNKSR1-202ENST00000374253 DLG5Q8TDM6 1919 aa20.35■□□□□ 0.85
CNKSR1-202ENST00000374253 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
CNKSR1-202ENST00000374253 KIF16BQ96L93 1317 aa20.35■□□□□ 0.85
CNKSR1-202ENST00000374253 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
CNKSR1-202ENST00000374253 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
CNKSR1-202ENST00000374253 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
CNKSR1-202ENST00000374253 MAP3K19Q56UN5 1328 aa20.33■□□□□ 0.85
CNKSR1-202ENST00000374253 IPO8O15397 1037 aaKnown RBP20.33■□□□□ 0.85
CNKSR1-202ENST00000374253 AAMPQ13685 434 aa20.33■□□□□ 0.84
CNKSR1-202ENST00000374253 TWISTNBQ3B726 338 aaPredicted RBP20.33■□□□□ 0.84
CNKSR1-202ENST00000374253 ALDH1L2Q3SY69 923 aa20.33■□□□□ 0.84
CNKSR1-202ENST00000374253 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
CNKSR1-202ENST00000374253 C1orf115Q9H7X2 142 aa20.32■□□□□ 0.84
CNKSR1-202ENST00000374253 CALD1Q05682 793 aaKnown RBP20.32■□□□□ 0.84
CNKSR1-202ENST00000374253 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
CNKSR1-202ENST00000374253 PEAK1Q9H792 1746 aa20.32■□□□□ 0.84
CNKSR1-202ENST00000374253 MRPL50Q8N5N7 158 aaKnown RBP20.31■□□□□ 0.84
CNKSR1-202ENST00000374253 DIP2AQ14689 1571 aa20.31■□□□□ 0.84
CNKSR1-202ENST00000374253 FOXO3O43524 673 aa20.31■□□□□ 0.84
CNKSR1-202ENST00000374253 ZBTB40Q9NUA8 1239 aa20.3■□□□□ 0.84
CNKSR1-202ENST00000374253 NLRP6P59044 892 aa20.3■□□□□ 0.84
CNKSR1-202ENST00000374253 LMOD3Q0VAK6 560 aa20.3■□□□□ 0.84
CNKSR1-202ENST00000374253 C14orf37Q86TY3 774 aa20.3■□□□□ 0.84
CNKSR1-202ENST00000374253 PTCH1Q13635 1447 aa20.29■□□□□ 0.84
CNKSR1-202ENST00000374253 SSH2Q76I76 1423 aa20.29■□□□□ 0.84
CNKSR1-202ENST00000374253 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
CNKSR1-202ENST00000374253 MIS18AQ9NYP9 233 aa20.29■□□□□ 0.84
CNKSR1-202ENST00000374253 PLEKHG5O94827 1062 aa20.29■□□□□ 0.84
CNKSR1-202ENST00000374253 AMPHP49418 695 aa20.28■□□□□ 0.84
CNKSR1-202ENST00000374253 USP31Q70CQ4 1352 aa20.27■□□□□ 0.84
CNKSR1-202ENST00000374253 USP19O94966 1318 aa20.27■□□□□ 0.83
CNKSR1-202ENST00000374253 LTV1Q96GA3 475 aaPredicted RBP20.26■□□□□ 0.83
CNKSR1-202ENST00000374253 BCL11AQ9H165 835 aa20.26■□□□□ 0.83
CNKSR1-202ENST00000374253 DAXXQ9UER7 740 aaPredicted RBP20.26■□□□□ 0.83
CNKSR1-202ENST00000374253 TTC21AQ8NDW8 1320 aa20.25■□□□□ 0.83
CNKSR1-202ENST00000374253 HDAC1Q13547 482 aaPredicted RBP20.25■□□□□ 0.83
CNKSR1-202ENST00000374253 CEP170BQ9Y4F5 1589 aaPredicted RBP20.24■□□□□ 0.83
CNKSR1-202ENST00000374253 RIMS1Q86UR5 1692 aaKnown RBP20.24■□□□□ 0.83
CNKSR1-202ENST00000374253 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
CNKSR1-202ENST00000374253 MTHFSDQ2M296 383 aaKnown RBP20.23■□□□□ 0.83
CNKSR1-202ENST00000374253 EYA1Q99502 592 aa20.23■□□□□ 0.83
CNKSR1-202ENST00000374253 NALCNQ8IZF0 1738 aa20.23■□□□□ 0.83
CNKSR1-202ENST00000374253 ZBTB7BO15156 539 aaPredicted RBP20.22■□□□□ 0.83
CNKSR1-202ENST00000374253 ZNF428Q96B54 188 aa20.22■□□□□ 0.83
CNKSR1-202ENST00000374253 LNPKQ9C0E8 428 aa20.22■□□□□ 0.83
CNKSR1-202ENST00000374253 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
CNKSR1-202ENST00000374253 FLT4P35916 1363 aa20.21■□□□□ 0.83
CNKSR1-202ENST00000374253 ANKLE2Q86XL3 938 aa20.21■□□□□ 0.83
CNKSR1-202ENST00000374253 ZBTB7CA1YPR0 619 aa20.21■□□□□ 0.83
CNKSR1-202ENST00000374253 PIK3C2AO00443 1686 aa20.21■□□□□ 0.83
CNKSR1-202ENST00000374253 BRPF1P55201 1214 aaPredicted RBP20.2■□□□□ 0.82
CNKSR1-202ENST00000374253 RTL5Q5HYW3 569 aaPredicted RBP20.2■□□□□ 0.82
CNKSR1-202ENST00000374253 SBNO1A3KN83 1393 aa20.2■□□□□ 0.82
CNKSR1-202ENST00000374253 SMC5Q8IY18 1101 aa20.2■□□□□ 0.82
CNKSR1-202ENST00000374253 VIRMAQ69YN4 1812 aaKnown RBP20.2■□□□□ 0.82
CNKSR1-202ENST00000374253 CHL1O00533 1208 aa20.19■□□□□ 0.82
CNKSR1-202ENST00000374253 USHBP1Q8N6Y0 703 aa20.19■□□□□ 0.82
CNKSR1-202ENST00000374253 ARHGAP45Q92619 1136 aa20.17■□□□□ 0.82
CNKSR1-202ENST00000374253 ABCC4O15439 1325 aa20.17■□□□□ 0.82
CNKSR1-202ENST00000374253 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
CNKSR1-202ENST00000374253 RGPD1P0DJD0 1748 aa20.17■□□□□ 0.82
CNKSR1-202ENST00000374253 HOXC9P31274 260 aa20.16■□□□□ 0.82
CNKSR1-202ENST00000374253 XPCQ01831 940 aaPredicted RBP20.16■□□□□ 0.82
CNKSR1-202ENST00000374253 PHF8Q9UPP1 1060 aa20.16■□□□□ 0.82
CNKSR1-202ENST00000374253 DEKP35659 375 aaKnown RBP20.16■□□□□ 0.82
CNKSR1-202ENST00000374253 ESCO1Q5FWF5 840 aa20.16■□□□□ 0.82
CNKSR1-202ENST00000374253 SIRT2Q8IXJ6 389 aa20.16■□□□□ 0.82
CNKSR1-202ENST00000374253 ARHGEF10O15013 1369 aa20.16■□□□□ 0.82
CNKSR1-202ENST00000374253 PIK3R4Q99570 1358 aa20.15■□□□□ 0.82
CNKSR1-202ENST00000374253 ANKRD45Q5TZF3 282 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms