RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 ATF7IPQ6VMQ6 1270 aa21.42■■□□□ 1.02
COL16A1-203ENST00000373672 KRT18P05783 430 aaKnown RBP21.41■■□□□ 1.02
COL16A1-203ENST00000373672 ERBINQ96RT1 1412 aa21.41■■□□□ 1.02
COL16A1-203ENST00000373672 BRPF1P55201 1214 aaPredicted RBP21.41■■□□□ 1.02
COL16A1-203ENST00000373672 NACAP1Q9BZK3 213 aa21.41■■□□□ 1.02
COL16A1-203ENST00000373672 TRIM22Q8IYM9 498 aa21.41■■□□□ 1.02
COL16A1-203ENST00000373672 TNMDQ9H2S6 317 aa21.4■■□□□ 1.02
COL16A1-203ENST00000373672 SLC12A5Q9H2X9 1139 aa21.4■■□□□ 1.02
COL16A1-203ENST00000373672 BACH2Q9BYV9 841 aa21.4■■□□□ 1.02
COL16A1-203ENST00000373672 ZNHIT6Q9NWK9 470 aaKnown RBP21.4■■□□□ 1.02
COL16A1-203ENST00000373672 SERPINC1P01008 464 aa21.4■■□□□ 1.02
COL16A1-203ENST00000373672 CHD1LQ86WJ1 897 aa21.4■■□□□ 1.02
COL16A1-203ENST00000373672 KLHL34Q8N239 644 aa21.39■■□□□ 1.02
COL16A1-203ENST00000373672 EFCAB5A4FU69 1503 aa21.39■■□□□ 1.02
COL16A1-203ENST00000373672 STK3Q13188 491 aa21.39■■□□□ 1.01
COL16A1-203ENST00000373672 KRT85P78386 507 aa21.39■■□□□ 1.01
COL16A1-203ENST00000373672 SYCP1Q15431 976 aa21.39■■□□□ 1.01
COL16A1-203ENST00000373672 SPC24Q8NBT2 197 aa21.39■■□□□ 1.01
COL16A1-203ENST00000373672 ZSCAN25Q6NSZ9 544 aa21.39■■□□□ 1.01
COL16A1-203ENST00000373672 CABP4P57796 275 aa21.38■■□□□ 1.01
COL16A1-203ENST00000373672 CCDC69A6NI79 296 aa21.38■■□□□ 1.01
COL16A1-203ENST00000373672 CABP1Q9NZU7 370 aa21.38■■□□□ 1.01
COL16A1-203ENST00000373672 H0YHG0 523 aa21.37■■□□□ 1.01
COL16A1-203ENST00000373672 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
COL16A1-203ENST00000373672 SIL1Q9H173 461 aa21.37■■□□□ 1.01
COL16A1-203ENST00000373672 ME1P48163 572 aa21.37■■□□□ 1.01
COL16A1-203ENST00000373672 STIM1Q13586 685 aa21.36■■□□□ 1.01
COL16A1-203ENST00000373672 PPFIBP1Q86W92 1011 aa21.36■■□□□ 1.01
COL16A1-203ENST00000373672 PROSER2Q86WR7 435 aaPredicted RBP21.36■■□□□ 1.01
COL16A1-203ENST00000373672 SPG7Q9UQ90 795 aa21.36■■□□□ 1.01
COL16A1-203ENST00000373672 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
COL16A1-203ENST00000373672 CCDC66A2RUB6 948 aa21.36■■□□□ 1.01
COL16A1-203ENST00000373672 CCDC191Q8NCU4 936 aa21.36■■□□□ 1.01
COL16A1-203ENST00000373672 TMEM132AQ24JP5 1023 aa21.36■■□□□ 1.01
COL16A1-203ENST00000373672 MAP4K4O95819 1239 aaPredicted RBP21.36■■□□□ 1.01
COL16A1-203ENST00000373672 ZSCAN31Q96LW9 406 aaPredicted RBP21.36■■□□□ 1.01
COL16A1-203ENST00000373672 LARP1BQ659C4 914 aaKnown RBP21.35■■□□□ 1.01
COL16A1-203ENST00000373672 RTEL1-TNFRSF6BF6WH68 1400 aa21.35■■□□□ 1.01
COL16A1-203ENST00000373672 CBFA2T2O43439 604 aa21.35■■□□□ 1.01
COL16A1-203ENST00000373672 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
COL16A1-203ENST00000373672 LUC7LQ9NQ29 371 aaKnown RBP21.34■■□□□ 1.01
COL16A1-203ENST00000373672 TXLNBQ8N3L3 684 aa21.34■■□□□ 1.01
COL16A1-203ENST00000373672 BRPF3Q9ULD4 1205 aa21.34■■□□□ 1.01
COL16A1-203ENST00000373672 STRN4Q9NRL3 753 aa21.34■■□□□ 1.01
COL16A1-203ENST00000373672 PDRG1Q9NUG6 133 aa21.34■■□□□ 1.01
COL16A1-203ENST00000373672 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
COL16A1-203ENST00000373672 CDKL5O76039 1030 aa21.34■■□□□ 1.01
COL16A1-203ENST00000373672 AACSQ86V21 672 aa21.34■■□□□ 1.01
COL16A1-203ENST00000373672 CIZ1Q9ULV3 898 aaPredicted RBP21.33■■□□□ 1.01
COL16A1-203ENST00000373672 NOL7Q9UMY1 257 aaKnown RBP21.33■■□□□ 1.01
COL16A1-203ENST00000373672 BLOC1S2Q6QNY1 142 aa21.33■■□□□ 1
COL16A1-203ENST00000373672 GRPEL1Q9HAV7 217 aa21.33■■□□□ 1
COL16A1-203ENST00000373672 ERLIN2O94905 339 aa21.33■■□□□ 1
COL16A1-203ENST00000373672 WWC2Q6AWC2 1192 aa21.33■■□□□ 1
COL16A1-203ENST00000373672 LEKR1Q6ZMV7 388 aa21.32■■□□□ 1
COL16A1-203ENST00000373672 CCDC57Q2TAC2 916 aa21.32■■□□□ 1
COL16A1-203ENST00000373672 KRI1Q8N9T8 703 aaKnown RBP21.32■■□□□ 1
COL16A1-203ENST00000373672 ZNF428Q96B54 188 aa21.32■■□□□ 1
COL16A1-203ENST00000373672 AXDND1Q5T1B0 1012 aaPredicted RBP21.32■■□□□ 1
COL16A1-203ENST00000373672 ATAD2Q6PL18 1390 aa21.31■■□□□ 1
COL16A1-203ENST00000373672 RPGRIP1LQ68CZ1 1315 aa21.31■■□□□ 1
COL16A1-203ENST00000373672 SKIDA1Q1XH10 827 aa21.31■■□□□ 1
COL16A1-203ENST00000373672 SPATA32Q96LK8 384 aa21.31■■□□□ 1
COL16A1-203ENST00000373672 CTNNA3Q9UI47 895 aa21.31■■□□□ 1
COL16A1-203ENST00000373672 HECW1Q76N89 1606 aa21.31■■□□□ 1
COL16A1-203ENST00000373672 SOGA3Q5TF21 947 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 SLC52A1Q9NWF4 448 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 DEF6Q9H4E7 631 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 SRGAP3O43295 1099 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 KRT32Q14532 448 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 MYL6BP14649 208 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 RPAP2Q8IXW5 612 aaPredicted RBP21.3■■□□□ 1
COL16A1-203ENST00000373672 THEMISQ8N1K5 641 aaPredicted RBP21.3■■□□□ 1
COL16A1-203ENST00000373672 CFAP45Q9UL16 551 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 NCAPD3P42695 1498 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 CCDC112Q8NEF3 446 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 NUP133Q8WUM0 1156 aa21.3■■□□□ 1
COL16A1-203ENST00000373672 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
COL16A1-203ENST00000373672 ANKRD30BQ9BXX2 1392 aa21.29■■□□□ 1
COL16A1-203ENST00000373672 FCHSD2O94868 740 aa21.29■■□□□ 1
COL16A1-203ENST00000373672 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
COL16A1-203ENST00000373672 PDIA4P13667 645 aaKnown RBP21.28■■□□□ 1
COL16A1-203ENST00000373672 MPHOSPH8Q99549 860 aa21.28■■□□□ 1
COL16A1-203ENST00000373672 ATP2B2Q01814 1243 aa21.28■■□□□ 1
COL16A1-203ENST00000373672 TOM1L2Q6ZVM7 507 aa21.28■■□□□ 1
COL16A1-203ENST00000373672 CCDC181Q5TID7 509 aa21.28■■□□□ 1
COL16A1-203ENST00000373672 GOLGA6L10A6NI86 522 aa21.28■■□□□ 1
COL16A1-203ENST00000373672 FKBP4Q02790 459 aaKnown RBP eCLIP21.27■■□□□ 1
COL16A1-203ENST00000373672 STK11IPQ8N1F8 1099 aa21.27■■□□□ 1
COL16A1-203ENST00000373672 TANGO6Q9C0B7 1094 aa21.27■■□□□ 1
COL16A1-203ENST00000373672 BTBD11A6QL63 1104 aa21.27■■□□□ 1
COL16A1-203ENST00000373672 CEP57L1Q8IYX8 460 aa21.27■■□□□ 1
COL16A1-203ENST00000373672 NUP62CLQ9H1M0 184 aa21.27■■□□□ 1
COL16A1-203ENST00000373672 CWC27Q6UX04 472 aaKnown RBP21.27■□□□□ 0.99
COL16A1-203ENST00000373672 TROQ12816 1431 aaPredicted RBP21.26■□□□□ 0.99
COL16A1-203ENST00000373672 CALRP27797 417 aaKnown RBP21.26■□□□□ 0.99
COL16A1-203ENST00000373672 ERLIN1O75477 346 aa21.26■□□□□ 0.99
COL16A1-203ENST00000373672 TSPYL1Q9H0U9 437 aa21.26■□□□□ 0.99
COL16A1-203ENST00000373672 DAPK1P53355 1430 aa21.26■□□□□ 0.99
COL16A1-203ENST00000373672 NFE2L2Q16236 605 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms