RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 NBPF11Q86T75 865 aa10.27□□□□□ -0.76
GARNL3-201ENST00000373386 MORC1Q86VD1 984 aa10.27□□□□□ -0.76
GARNL3-201ENST00000373386 CFAP53Q96M91 514 aa10.27□□□□□ -0.76
GARNL3-201ENST00000373386 SH3BP1Q9Y3L3 701 aa10.27□□□□□ -0.76
GARNL3-201ENST00000373386 KIF20BQ96Q89 1820 aa10.27□□□□□ -0.77
GARNL3-201ENST00000373386 GEMIN8Q9NWZ8 242 aaKnown RBP10.27□□□□□ -0.77
GARNL3-201ENST00000373386 SETD1AO15047 1707 aaKnown RBP10.26□□□□□ -0.77
GARNL3-201ENST00000373386 SPATA31D1Q6ZQQ2 1576 aa10.26□□□□□ -0.77
GARNL3-201ENST00000373386 TTC36A6NLP5 189 aa10.26□□□□□ -0.77
GARNL3-201ENST00000373386 GTPBP4Q9BZE4 634 aaKnown RBP10.26□□□□□ -0.77
GARNL3-201ENST00000373386 NLRP1Q9C000 1473 aa10.26□□□□□ -0.77
GARNL3-201ENST00000373386 CFAP65Q6ZU64 1925 aaKnown RBP10.25□□□□□ -0.77
GARNL3-201ENST00000373386 HSP90AB3PQ58FF7 597 aa10.25□□□□□ -0.77
GARNL3-201ENST00000373386 ALKQ9UM73 1620 aa10.25□□□□□ -0.77
GARNL3-201ENST00000373386 RAPGEF3O95398 923 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 GGT6Q6P531 493 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 SPINK5Q9NQ38 1064 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-201ENST00000373386 TRAK1Q9UPV9 953 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 MAPK8IP3Q9UPT6 1336 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 CD163L1Q9NR16 1453 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 GOLGA6L3A6NEY3 463 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 IL16Q14005 1332 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 KNDC1Q76NI1 1749 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 AEBP1Q8IUX7 1158 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 CCDC146Q8IYE0 955 aa10.24□□□□□ -0.77
GARNL3-201ENST00000373386 PNPLA6Q8IY17 1366 aa10.23□□□□□ -0.77
GARNL3-201ENST00000373386 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
GARNL3-201ENST00000373386 SLC12A5Q9H2X9 1139 aa10.23□□□□□ -0.77
GARNL3-201ENST00000373386 YTHDC2Q9H6S0 1430 aaKnown RBP10.23□□□□□ -0.77
GARNL3-201ENST00000373386 ATP7BP35670 1465 aa10.23□□□□□ -0.77
GARNL3-201ENST00000373386 ZBTB7CA1YPR0 619 aa10.23□□□□□ -0.77
GARNL3-201ENST00000373386 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
GARNL3-201ENST00000373386 SEMA3FQ13275 785 aa10.22□□□□□ -0.77
GARNL3-201ENST00000373386 L1TD1Q5T7N2 865 aaKnown RBP10.22□□□□□ -0.77
GARNL3-201ENST00000373386 MYH16Q9H6N6 1097 aa10.22□□□□□ -0.77
GARNL3-201ENST00000373386 YEATS2Q9ULM3 1422 aa10.22□□□□□ -0.77
GARNL3-201ENST00000373386 A0A1W2PP64 1363 aa10.21□□□□□ -0.77
GARNL3-201ENST00000373386 RARSP54136 660 aaKnown RBP10.21□□□□□ -0.77
GARNL3-201ENST00000373386 IDI1Q13907 227 aa10.21□□□□□ -0.77
GARNL3-201ENST00000373386 PMFBP1Q8TBY8 1022 aa10.21□□□□□ -0.77
GARNL3-201ENST00000373386 CLUAP1Q96AJ1 413 aa10.21□□□□□ -0.77
GARNL3-201ENST00000373386 CHGAP10645 457 aaKnown RBP10.21□□□□□ -0.78
GARNL3-201ENST00000373386 TCP11L2Q8N4U5 519 aa10.21□□□□□ -0.78
GARNL3-201ENST00000373386 MTHFSP49914 203 aa10.2□□□□□ -0.78
GARNL3-201ENST00000373386 TERF2IPQ9NYB0 399 aa10.2□□□□□ -0.78
GARNL3-201ENST00000373386 BCAR3O75815 825 aa10.2□□□□□ -0.78
GARNL3-201ENST00000373386 PPIP5K1Q6PFW1 1433 aa10.19□□□□□ -0.78
GARNL3-201ENST00000373386 TMEM132EQ6IEE7 984 aa10.19□□□□□ -0.78
GARNL3-201ENST00000373386 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
GARNL3-201ENST00000373386 IRF6O14896 467 aa10.19□□□□□ -0.78
GARNL3-201ENST00000373386 PLEKHF1Q96S99 279 aa10.19□□□□□ -0.78
GARNL3-201ENST00000373386 ZSCAN20P17040 1043 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-201ENST00000373386 NBPF9Q3BBW0 867 aa10.18□□□□□ -0.78
GARNL3-201ENST00000373386 A2ML1A8K2U0 1454 aa10.18□□□□□ -0.78
GARNL3-201ENST00000373386 BANK1Q8NDB2 785 aa10.18□□□□□ -0.78
GARNL3-201ENST00000373386 NECTIN2Q92692 538 aa10.18□□□□□ -0.78
GARNL3-201ENST00000373386 ZNF428Q96B54 188 aa10.18□□□□□ -0.78
GARNL3-201ENST00000373386 SIRT1Q96EB6 747 aa10.18□□□□□ -0.78
GARNL3-201ENST00000373386 FRAT2O75474 233 aaPredicted RBP10.17□□□□□ -0.78
GARNL3-201ENST00000373386 BECN1Q14457 450 aa10.17□□□□□ -0.78
GARNL3-201ENST00000373386 FAM177A1Q8N128 213 aaPredicted RBP10.17□□□□□ -0.78
GARNL3-201ENST00000373386 MPNDQ8N594 471 aa10.17□□□□□ -0.78
GARNL3-201ENST00000373386 NRXN3Q9Y4C0 1643 aa10.17□□□□□ -0.78
GARNL3-201ENST00000373386 HSP90AB4PQ58FF6 505 aa10.17□□□□□ -0.78
GARNL3-201ENST00000373386 CASC1Q6TDU7 716 aa10.17□□□□□ -0.78
GARNL3-201ENST00000373386 TECPR2O15040 1411 aa10.17□□□□□ -0.78
GARNL3-201ENST00000373386 MON2Q7Z3U7 1717 aa10.17□□□□□ -0.78
GARNL3-201ENST00000373386 TRHP20396 242 aaPredicted RBP10.16□□□□□ -0.78
GARNL3-201ENST00000373386 BRPF1P55201 1214 aaPredicted RBP10.16□□□□□ -0.78
GARNL3-201ENST00000373386 TMTC2Q8N394 836 aa10.16□□□□□ -0.78
GARNL3-201ENST00000373386 IGHDP01880 384 aa10.16□□□□□ -0.78
GARNL3-201ENST00000373386 FAM135BQ49AJ0 1406 aa10.16□□□□□ -0.78
GARNL3-201ENST00000373386 CPS1P31327 1500 aa10.16□□□□□ -0.78
GARNL3-201ENST00000373386 USP19O94966 1318 aa10.15□□□□□ -0.78
GARNL3-201ENST00000373386 LMOD3Q0VAK6 560 aa10.15□□□□□ -0.78
GARNL3-201ENST00000373386 AKAP12Q02952 1782 aa10.15□□□□□ -0.78
GARNL3-201ENST00000373386 TERF1P54274 439 aa10.15□□□□□ -0.79
GARNL3-201ENST00000373386 CPSF1Q10570 1443 aaKnown RBP10.14□□□□□ -0.79
GARNL3-201ENST00000373386 AATKQ6ZMQ8 1374 aa10.14□□□□□ -0.79
GARNL3-201ENST00000373386 ZNF500O60304 480 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-201ENST00000373386 HDGFL2Q7Z4V5 671 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-201ENST00000373386 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
GARNL3-201ENST00000373386 CDK12Q9NYV4 1490 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-201ENST00000373386 GOLIM4O00461 696 aa10.14□□□□□ -0.79
GARNL3-201ENST00000373386 FYB1O15117 783 aa10.14□□□□□ -0.79
GARNL3-201ENST00000373386 KDM4AO75164 1064 aa10.14□□□□□ -0.79
GARNL3-201ENST00000373386 RWDD1Q9H446 243 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-201ENST00000373386 CABP2Q9NPB3 220 aa10.14□□□□□ -0.79
GARNL3-201ENST00000373386 IRX5P78411 483 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-201ENST00000373386 MAP2K1Q02750 393 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-201ENST00000373386 MVPQ14764 893 aaKnown RBP10.13□□□□□ -0.79
GARNL3-201ENST00000373386 OTUD6BQ8N6M0 293 aa10.13□□□□□ -0.79
GARNL3-201ENST00000373386 EDC4Q6P2E9 1401 aaKnown RBP10.13□□□□□ -0.79
GARNL3-201ENST00000373386 SATB1Q01826 763 aa10.13□□□□□ -0.79
GARNL3-201ENST00000373386 ALDH1L2Q3SY69 923 aa10.13□□□□□ -0.79
GARNL3-201ENST00000373386 ZKSCAN2Q63HK3 967 aa10.13□□□□□ -0.79
GARNL3-201ENST00000373386 LRRC7Q96NW7 1537 aa10.13□□□□□ -0.79
GARNL3-201ENST00000373386 FCHSD2O94868 740 aa10.13□□□□□ -0.79
GARNL3-201ENST00000373386 TMPOP42166 694 aaKnown RBP10.13□□□□□ -0.79
GARNL3-201ENST00000373386 HDAC1Q13547 482 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms